RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 C11orf86A6NJI1 115 aa11.61□□□□□ -0.55
VEGFA-222ENST00000520948 PLA2G1BP04054 148 aaKnown RBP11.61□□□□□ -0.55
VEGFA-222ENST00000520948 CAMK2N2Q96S95 79 aa11.61□□□□□ -0.55
VEGFA-222ENST00000520948 F8VRH5 84 aa11.6□□□□□ -0.55
VEGFA-222ENST00000520948 ODF1Q14990 250 aa11.6□□□□□ -0.55
VEGFA-222ENST00000520948 RNF151Q2KHN1 245 aa11.6□□□□□ -0.55
VEGFA-222ENST00000520948 Q8IZM0 81 aa11.6□□□□□ -0.55
VEGFA-222ENST00000520948 MRPL35Q9NZE8 188 aaKnown RBP11.6□□□□□ -0.55
VEGFA-222ENST00000520948 C10orf25Q5T742 122 aa11.59□□□□□ -0.55
VEGFA-222ENST00000520948 H3BRM9 83 aa11.58□□□□□ -0.56
VEGFA-222ENST00000520948 SPINK8P0C7L1 97 aa11.58□□□□□ -0.56
VEGFA-222ENST00000520948 CIRBPQ14011 172 aaKnown RBP11.58□□□□□ -0.56
VEGFA-222ENST00000520948 UNQ6190/PRO20217Q6UXQ8 127 aa11.58□□□□□ -0.56
VEGFA-222ENST00000520948 IGLV5-39A0A0G2JS06 123 aa11.57□□□□□ -0.56
VEGFA-222ENST00000520948 NDUFA1O15239 70 aa11.57□□□□□ -0.56
VEGFA-222ENST00000520948 KRTAP29-1A8MX34 341 aaPredicted RBP11.56□□□□□ -0.56
VEGFA-222ENST00000520948 PANO1I0J062 215 aa11.56□□□□□ -0.56
VEGFA-222ENST00000520948 C6orf226Q5I0X4 101 aa11.56□□□□□ -0.56
VEGFA-222ENST00000520948 C2orf82Q6UX34 121 aa11.56□□□□□ -0.56
VEGFA-222ENST00000520948 MAP1LC3CQ9BXW4 147 aa11.56□□□□□ -0.56
VEGFA-222ENST00000520948 TOMM7Q9P0U1 55 aa11.56□□□□□ -0.56
VEGFA-222ENST00000520948 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.56□□□□□ -0.56
VEGFA-222ENST00000520948 H0Y8G0 127 aa11.55□□□□□ -0.56
VEGFA-222ENST00000520948 TMEM170BQ5T4T1 132 aa11.55□□□□□ -0.56
VEGFA-222ENST00000520948 SCXQ7RTU7 201 aa11.55□□□□□ -0.56
VEGFA-222ENST00000520948 COX7B2Q8TF08 81 aa11.55□□□□□ -0.56
VEGFA-222ENST00000520948 C6orf48Q9UBA6 75 aa11.55□□□□□ -0.56
VEGFA-222ENST00000520948 PRSS2P07478 247 aa11.54□□□□□ -0.56
VEGFA-222ENST00000520948 TRBV30A0A0K0K1B3 111 aa11.53□□□□□ -0.56
VEGFA-222ENST00000520948 TMEM223A0PJW6 202 aa11.53□□□□□ -0.56
VEGFA-222ENST00000520948 SYS1-DBNDD2H3BUS1 97 aa11.53□□□□□ -0.56
VEGFA-222ENST00000520948 A0A096LNI7 61 aa11.52□□□□□ -0.57
VEGFA-222ENST00000520948 LOC107984640A0A0U1RRK4 108 aa11.52□□□□□ -0.57
VEGFA-222ENST00000520948 TLX1NBP0CAT3 122 aa11.52□□□□□ -0.57
VEGFA-222ENST00000520948 CHTF8P0CG12 524 aa11.52□□□□□ -0.57
VEGFA-222ENST00000520948 PKIGQ9Y2B9 76 aa11.52□□□□□ -0.57
VEGFA-222ENST00000520948 CXCL5P42830 114 aa11.51□□□□□ -0.57
VEGFA-222ENST00000520948 CKS1BP61024 79 aa11.51□□□□□ -0.57
VEGFA-222ENST00000520948 CIRBP-AS1Q8TBR5 109 aa11.51□□□□□ -0.57
VEGFA-222ENST00000520948 SPACA4Q8TDM5 124 aa11.51□□□□□ -0.57
VEGFA-222ENST00000520948 C3orf79P0CE67 100 aa11.5□□□□□ -0.57
VEGFA-222ENST00000520948 PLNP26678 52 aa11.5□□□□□ -0.57
VEGFA-222ENST00000520948 PET117Q6UWS5 81 aa11.5□□□□□ -0.57
VEGFA-222ENST00000520948 HIST3H2BBQ8N257 126 aa11.5□□□□□ -0.57
VEGFA-222ENST00000520948 PMCHL2Q9BQD1 86 aa11.5□□□□□ -0.57
VEGFA-222ENST00000520948 DPM2O94777 84 aa11.49□□□□□ -0.57
VEGFA-222ENST00000520948 PTTG1IPP53801 180 aa11.49□□□□□ -0.57
VEGFA-222ENST00000520948 LINC01545Q5VT33 79 aa11.49□□□□□ -0.57
VEGFA-222ENST00000520948 IGKCP01834 107 aa11.48□□□□□ -0.57
VEGFA-222ENST00000520948 C9orf116Q5BN46 136 aaPredicted RBP11.48□□□□□ -0.57
VEGFA-222ENST00000520948 LRP1Q07954 4544 aaKnown RBP11.48□□□□□ -0.57
VEGFA-222ENST00000520948 IGKV2-24A0A0C4DH68 120 aa11.47□□□□□ -0.57
VEGFA-222ENST00000520948 KRTAP10-4P60372 401 aaPredicted RBP11.47□□□□□ -0.57
VEGFA-222ENST00000520948 Q6ZRP5 223 aa11.47□□□□□ -0.57
VEGFA-222ENST00000520948 LINC00474Q9P2X8 69 aa11.47□□□□□ -0.57
VEGFA-222ENST00000520948 A0A087WYN8 130 aa11.46□□□□□ -0.57
VEGFA-222ENST00000520948 C5orf52A6NGY3 159 aa11.46□□□□□ -0.57
VEGFA-222ENST00000520948 S100A6P06703 90 aa11.46□□□□□ -0.57
VEGFA-222ENST00000520948 GAGE2BQ13066 116 aa11.46□□□□□ -0.57
VEGFA-222ENST00000520948 PLAC8Q9NZF1 115 aa11.46□□□□□ -0.57
VEGFA-222ENST00000520948 NDUFC2-KCTD14E9PQ53 114 aa11.45□□□□□ -0.58
VEGFA-222ENST00000520948 SNRPEP62304 92 aaKnown RBP11.45□□□□□ -0.58
VEGFA-222ENST00000520948 MAJINQ3KP22 176 aa11.45□□□□□ -0.58
VEGFA-222ENST00000520948 HIST1H2BLQ99880 126 aa11.45□□□□□ -0.58
VEGFA-222ENST00000520948 RPL18AQ02543 176 aaKnown RBP11.44□□□□□ -0.58
VEGFA-222ENST00000520948 ZNF625Q96I27 306 aaPredicted RBP11.44□□□□□ -0.58
VEGFA-222ENST00000520948 KRTDAPP60985 99 aa11.43□□□□□ -0.58
VEGFA-222ENST00000520948 SERTAD4-AS1Q5TG53 156 aa11.43□□□□□ -0.58
VEGFA-222ENST00000520948 DPH3Q96FX2 82 aa11.43□□□□□ -0.58
VEGFA-222ENST00000520948 HMCN2Q8NDA2 5059 aa11.42□□□□□ -0.58
VEGFA-222ENST00000520948 STPG4Q8N801 248 aa11.42□□□□□ -0.58
VEGFA-222ENST00000520948 FAT3Q8TDW7 4589 aa11.41□□□□□ -0.58
VEGFA-222ENST00000520948 LEPROTO15243 131 aa11.41□□□□□ -0.58
VEGFA-222ENST00000520948 S100A2P29034 98 aa11.41□□□□□ -0.58
VEGFA-222ENST00000520948 A0A1W2PNN7 141 aa11.4□□□□□ -0.58
VEGFA-222ENST00000520948 GAGE2EQ4V326 116 aa11.4□□□□□ -0.58
VEGFA-222ENST00000520948 SFTA2Q6UW10 78 aa11.4□□□□□ -0.58
VEGFA-222ENST00000520948 GAGE2DQ9UEU5 116 aa11.4□□□□□ -0.58
VEGFA-222ENST00000520948 OXTP01178 125 aa11.39□□□□□ -0.59
VEGFA-222ENST00000520948 TSPEAR-AS2P59090 65 aa11.39□□□□□ -0.59
VEGFA-222ENST00000520948 C9orf129Q5T035 196 aaKnown RBP11.39□□□□□ -0.59
VEGFA-222ENST00000520948 HERVK_113P61574 105 aa11.38□□□□□ -0.59
VEGFA-222ENST00000520948 PLEKHB2Q96CS7 222 aa11.38□□□□□ -0.59
VEGFA-222ENST00000520948 E9PLD3 99 aa11.37□□□□□ -0.59
VEGFA-222ENST00000520948 KRTAP7-1Q8IUC3 87 aa11.37□□□□□ -0.59
VEGFA-222ENST00000520948 PLA2G2DQ9UNK4 145 aa11.37□□□□□ -0.59
VEGFA-222ENST00000520948 J3QQQ9 107 aa11.36□□□□□ -0.59
VEGFA-222ENST00000520948 RPL37AP61513 92 aaKnown RBP11.36□□□□□ -0.59
VEGFA-222ENST00000520948 COX17Q14061 63 aa11.36□□□□□ -0.59
VEGFA-222ENST00000520948 NDUFA12Q9UI09 145 aa11.36□□□□□ -0.59
VEGFA-222ENST00000520948 ERG28Q9UKR5 140 aa11.36□□□□□ -0.59
VEGFA-222ENST00000520948 UBR4Q5T4S7 5183 aa11.35□□□□□ -0.59
VEGFA-222ENST00000520948 C20orf202A1L168 122 aa11.35□□□□□ -0.59
VEGFA-222ENST00000520948 PKHD1L1Q86WI1 4243 aa11.35□□□□□ -0.59
VEGFA-222ENST00000520948 FAM168BA1KXE4 195 aa11.34□□□□□ -0.59
VEGFA-222ENST00000520948 PFN2P35080 140 aa11.34□□□□□ -0.59
VEGFA-222ENST00000520948 HNRNPA3P51991 378 aaKnown RBP11.34□□□□□ -0.59
VEGFA-222ENST00000520948 HERV-K104P63124 156 aa11.34□□□□□ -0.59
VEGFA-222ENST00000520948 MYMXA0A1B0GTQ4 84 aa11.33□□□□□ -0.6
VEGFA-222ENST00000520948 AKR1D1P51857 326 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms