RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 LINC00269Q8N2A0 174 aa6.1□□□□□ -1.43
HDAC3-215ENST00000519474 C20orf203Q8NBC4 194 aa6.1□□□□□ -1.43
HDAC3-215ENST00000519474 PPDPFLQ8WWR9 84 aa6.1□□□□□ -1.43
HDAC3-215ENST00000519474 DPH3Q96FX2 82 aa6.1□□□□□ -1.43
HDAC3-215ENST00000519474 PGLYRP4Q96LB8 373 aa6.1□□□□□ -1.43
HDAC3-215ENST00000519474 TRAV26-2A0A0B4J265 109 aa6.09□□□□□ -1.43
HDAC3-215ENST00000519474 INAFM2P0DMQ5 153 aa6.09□□□□□ -1.43
HDAC3-215ENST00000519474 MIAQ16674 131 aa6.09□□□□□ -1.43
HDAC3-215ENST00000519474 C9orf153Q5TBE3 101 aa6.09□□□□□ -1.43
HDAC3-215ENST00000519474 Q5VSD8 79 aa6.09□□□□□ -1.43
HDAC3-215ENST00000519474 SMIM7Q9BQ49 75 aa6.09□□□□□ -1.43
HDAC3-215ENST00000519474 C20orf78Q9BR46 151 aa6.09□□□□□ -1.43
HDAC3-215ENST00000519474 TMEM243Q9BU79 118 aa6.09□□□□□ -1.43
HDAC3-215ENST00000519474 GFRA4Q9GZZ7 299 aa6.09□□□□□ -1.43
HDAC3-215ENST00000519474 OSTCQ9NRP0 149 aa6.09□□□□□ -1.43
HDAC3-215ENST00000519474 TRAPPC1Q9Y5R8 145 aa6.09□□□□□ -1.43
HDAC3-215ENST00000519474 GAS8-AS1O95177 125 aa6.08□□□□□ -1.44
HDAC3-215ENST00000519474 APOMO95445 188 aa6.08□□□□□ -1.44
HDAC3-215ENST00000519474 KRTDAPP60985 99 aa6.08□□□□□ -1.44
HDAC3-215ENST00000519474 RPL39LQ96EH5 51 aaKnown RBP6.08□□□□□ -1.44
HDAC3-215ENST00000519474 PRELID3AQ96N28 172 aa6.08□□□□□ -1.44
HDAC3-215ENST00000519474 PYGO1Q9Y3Y4 419 aa6.08□□□□□ -1.44
HDAC3-215ENST00000519474 ABCA13Q86UQ4 5058 aa6.07□□□□□ -1.44
HDAC3-215ENST00000519474 NDUFC2-KCTD14E9PQ53 114 aa6.07□□□□□ -1.44
HDAC3-215ENST00000519474 FAM229AH3BQW9 127 aa6.07□□□□□ -1.44
HDAC3-215ENST00000519474 CRPP02741 224 aa6.07□□□□□ -1.44
HDAC3-215ENST00000519474 PRSS1P07477 247 aa6.07□□□□□ -1.44
HDAC3-215ENST00000519474 PFN2P35080 140 aa6.07□□□□□ -1.44
HDAC3-215ENST00000519474 REG3AQ06141 175 aa6.07□□□□□ -1.44
HDAC3-215ENST00000519474 GAGE2AQ6NT46 116 aa6.07□□□□□ -1.44
HDAC3-215ENST00000519474 CLPSL2Q6UWE3 100 aa6.07□□□□□ -1.44
HDAC3-215ENST00000519474 MRPL55Q7Z7F7 128 aaKnown RBP6.07□□□□□ -1.44
HDAC3-215ENST00000519474 TSKUQ8WUA8 353 aa6.07□□□□□ -1.44
HDAC3-215ENST00000519474 RNF185Q96GF1 192 aa6.07□□□□□ -1.44
HDAC3-215ENST00000519474 V9GYV3 84 aa6.07□□□□□ -1.44
HDAC3-215ENST00000519474 A0A1B0GUT8 65 aa6.06□□□□□ -1.44
HDAC3-215ENST00000519474 HIGD1CA8MV81 97 aa6.06□□□□□ -1.44
HDAC3-215ENST00000519474 C3orf79P0CE67 100 aa6.06□□□□□ -1.44
HDAC3-215ENST00000519474 SMIM13P0DJ93 91 aa6.06□□□□□ -1.44
HDAC3-215ENST00000519474 RPL23P62829 140 aaKnown RBP6.06□□□□□ -1.44
HDAC3-215ENST00000519474 C14orf177Q52M58 125 aa6.06□□□□□ -1.44
HDAC3-215ENST00000519474 LYRM7Q5U5X0 104 aa6.06□□□□□ -1.44
HDAC3-215ENST00000519474 IGLV10-54A0A075B6I4 117 aa6.05□□□□□ -1.44
HDAC3-215ENST00000519474 TRAV8-4A0A0B4J246 113 aa6.05□□□□□ -1.44
HDAC3-215ENST00000519474 TRBV6-5A0A0K0K1A5 114 aa6.05□□□□□ -1.44
HDAC3-215ENST00000519474 SDHAF1A6NFY7 115 aa6.05□□□□□ -1.44
HDAC3-215ENST00000519474 NUPR1O60356 82 aa6.05□□□□□ -1.44
HDAC3-215ENST00000519474 POLR2KP53803 58 aaKnown RBP6.05□□□□□ -1.44
HDAC3-215ENST00000519474 ETDBQ3ZM63 59 aa6.05□□□□□ -1.44
HDAC3-215ENST00000519474 Q6ZRU5 148 aa6.05□□□□□ -1.44
HDAC3-215ENST00000519474 PRO0461Q9UI25 63 aa6.05□□□□□ -1.44
HDAC3-215ENST00000519474 TRBV20-1A0A075B6N2 111 aa6.04□□□□□ -1.44
HDAC3-215ENST00000519474 H3BS24 57 aa6.04□□□□□ -1.44
HDAC3-215ENST00000519474 SERF1AO75920 110 aa6.04□□□□□ -1.44
HDAC3-215ENST00000519474 HLA-DQA1P01909 254 aa6.04□□□□□ -1.44
HDAC3-215ENST00000519474 SLPIP03973 132 aa6.04□□□□□ -1.44
HDAC3-215ENST00000519474 BAGE3Q86Y29 109 aa6.04□□□□□ -1.44
HDAC3-215ENST00000519474 C9orf163Q8N9P6 203 aa6.04□□□□□ -1.44
HDAC3-215ENST00000519474 COPS9Q8WXC6 57 aa6.04□□□□□ -1.44
HDAC3-215ENST00000519474 CHAC1Q9BUX1 264 aa6.04□□□□□ -1.44
HDAC3-215ENST00000519474 FAT1Q14517 4588 aa6.03□□□□□ -1.44
HDAC3-215ENST00000519474 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.03□□□□□ -1.44
HDAC3-215ENST00000519474 FAM236AA0A1B0GUQ0 79 aa6.03□□□□□ -1.44
HDAC3-215ENST00000519474 FAM236BA0A1B0GV22 79 aa6.03□□□□□ -1.44
HDAC3-215ENST00000519474 IGKV2-29A2NJV5 120 aaPredicted RBP6.03□□□□□ -1.44
HDAC3-215ENST00000519474 E9PLD3 99 aa6.03□□□□□ -1.44
HDAC3-215ENST00000519474 H7C423 109 aa6.03□□□□□ -1.44
HDAC3-215ENST00000519474 I3L3M4 83 aa6.03□□□□□ -1.44
HDAC3-215ENST00000519474 UBE2L6O14933 153 aa6.03□□□□□ -1.44
HDAC3-215ENST00000519474 TRACP01848 142 aa6.03□□□□□ -1.44
HDAC3-215ENST00000519474 COX8AP10176 69 aa6.03□□□□□ -1.44
HDAC3-215ENST00000519474 LINC00310P59036 64 aa6.03□□□□□ -1.44
HDAC3-215ENST00000519474 RPL18AQ02543 176 aaKnown RBP6.03□□□□□ -1.44
HDAC3-215ENST00000519474 SDIM1Q6ZPB5 146 aa6.03□□□□□ -1.44
HDAC3-215ENST00000519474 TMEM136Q6ZRR5 245 aa6.03□□□□□ -1.44
HDAC3-215ENST00000519474 SCXQ7RTU7 201 aa6.03□□□□□ -1.44
HDAC3-215ENST00000519474 AMN1Q8IY45 258 aa6.03□□□□□ -1.44
HDAC3-215ENST00000519474 ANKRD29Q8N6D5 301 aa6.03□□□□□ -1.44
HDAC3-215ENST00000519474 CIRBP-AS1Q8TBR5 109 aa6.03□□□□□ -1.44
HDAC3-215ENST00000519474 CARD19Q96LW7 228 aa6.03□□□□□ -1.44
HDAC3-215ENST00000519474 TRBV7-7A0A0K0K1E9 115 aa6.02□□□□□ -1.45
HDAC3-215ENST00000519474 SMIM27A0A1W2PRY6 76 aa6.02□□□□□ -1.45
HDAC3-215ENST00000519474 FGF6P10767 208 aa6.02□□□□□ -1.45
HDAC3-215ENST00000519474 RIGQ13278 110 aa6.02□□□□□ -1.45
HDAC3-215ENST00000519474 DNAH8Q96JB1 4490 aa6.01□□□□□ -1.45
HDAC3-215ENST00000519474 A0A1B0GWB2 263 aa6.01□□□□□ -1.45
HDAC3-215ENST00000519474 SMKR1H3BMG3 65 aa6.01□□□□□ -1.45
HDAC3-215ENST00000519474 TSHBP01222 138 aa6.01□□□□□ -1.45
HDAC3-215ENST00000519474 TEN1Q86WV5 123 aa6.01□□□□□ -1.45
HDAC3-215ENST00000519474 LINC00528Q8N1L1 170 aa6.01□□□□□ -1.45
HDAC3-215ENST00000519474 TRAV13-1A0A0B4J241 112 aa6□□□□□ -1.45
HDAC3-215ENST00000519474 IGKV3OR2-268A0A0C4DH90 116 aa6□□□□□ -1.45
HDAC3-215ENST00000519474 TRBV27A0A0K0K1C4 114 aa6□□□□□ -1.45
HDAC3-215ENST00000519474 FAM240AA0A1B0GVK7 77 aa6□□□□□ -1.45
HDAC3-215ENST00000519474 PANO1I0J062 215 aa6□□□□□ -1.45
HDAC3-215ENST00000519474 VCYO14598 125 aa6□□□□□ -1.45
HDAC3-215ENST00000519474 APCSP02743 223 aa6□□□□□ -1.45
HDAC3-215ENST00000519474 COX7CP15954 63 aa6□□□□□ -1.45
HDAC3-215ENST00000519474 KRTAP10-4P60372 401 aaPredicted RBP6□□□□□ -1.45
HDAC3-215ENST00000519474 MRPL51Q4U2R6 128 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms