RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 TNFSF18Q9UNG2 199 aa0.27□□□□□ -2.37
SKP1-205ENST00000519054 TRAV12-2A0A075B6T6 113 aa0.26□□□□□ -2.37
SKP1-205ENST00000519054 A0A1W2PPM0 123 aa0.26□□□□□ -2.37
SKP1-205ENST00000519054 H3BRM9 83 aa0.26□□□□□ -2.37
SKP1-205ENST00000519054 HMGN2P05204 90 aaKnown RBP0.26□□□□□ -2.37
SKP1-205ENST00000519054 HLA-DRB4P13762 266 aa0.26□□□□□ -2.37
SKP1-205ENST00000519054 SDF2Q99470 211 aa0.26□□□□□ -2.37
SKP1-205ENST00000519054 HOPXQ9BPY8 73 aaPredicted RBP0.26□□□□□ -2.37
SKP1-205ENST00000519054 TAF9BQ9HBM6 251 aa0.26□□□□□ -2.37
SKP1-205ENST00000519054 PRO0255Q9UI72 69 aa0.26□□□□□ -2.37
SKP1-205ENST00000519054 OR52A1Q9UKL2 312 aa0.26□□□□□ -2.37
SKP1-205ENST00000519054 SSR3Q9UNL2 185 aa0.26□□□□□ -2.37
SKP1-205ENST00000519054 V9GYQ6 96 aa0.26□□□□□ -2.37
SKP1-205ENST00000519054 HLA-DRB4X5D2U9 266 aa0.26□□□□□ -2.37
SKP1-205ENST00000519054 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.25□□□□□ -2.37
SKP1-205ENST00000519054 A0A0D9SG42 100 aa0.25□□□□□ -2.37
SKP1-205ENST00000519054 hDV103S1A0JD37 113 aa0.25□□□□□ -2.37
SKP1-205ENST00000519054 C9orf170A2RU37 121 aa0.25□□□□□ -2.37
SKP1-205ENST00000519054 JMJD7-PLA2G4BH0Y9G9 81 aa0.25□□□□□ -2.37
SKP1-205ENST00000519054 M0R2Z0 102 aa0.25□□□□□ -2.37
SKP1-205ENST00000519054 NDUFA4O00483 81 aa0.25□□□□□ -2.37
SKP1-205ENST00000519054 IDO1P14902 403 aa0.25□□□□□ -2.37
SKP1-205ENST00000519054 SERPINB1P30740 379 aa0.25□□□□□ -2.37
SKP1-205ENST00000519054 TAS2R41P59536 307 aa0.25□□□□□ -2.37
SKP1-205ENST00000519054 BASP1P80723 227 aaKnown RBP0.25□□□□□ -2.37
SKP1-205ENST00000519054 C9orf116Q5BN46 136 aaPredicted RBP0.25□□□□□ -2.37
SKP1-205ENST00000519054 Q5XG85 94 aa0.25□□□□□ -2.37
SKP1-205ENST00000519054 SPAG11AQ6PDA7 123 aa0.25□□□□□ -2.37
SKP1-205ENST00000519054 LINC00575Q6W349 94 aa0.25□□□□□ -2.37
SKP1-205ENST00000519054 TEN1Q86WV5 123 aa0.25□□□□□ -2.37
SKP1-205ENST00000519054 LINC00269Q8N2A0 174 aa0.25□□□□□ -2.37
SKP1-205ENST00000519054 OR10AG1Q8NH19 301 aa0.25□□□□□ -2.37
SKP1-205ENST00000519054 OR13C6PQ8NH95 151 aa0.25□□□□□ -2.37
SKP1-205ENST00000519054 PLEKHB2Q96CS7 222 aa0.25□□□□□ -2.37
SKP1-205ENST00000519054 PRRT1Q99946 306 aa0.25□□□□□ -2.37
SKP1-205ENST00000519054 RTL8AQ9BWD3 113 aa0.25□□□□□ -2.37
SKP1-205ENST00000519054 TMEM138Q9NPI0 162 aa0.25□□□□□ -2.37
SKP1-205ENST00000519054 OTORQ9NRC9 128 aa0.25□□□□□ -2.37
SKP1-205ENST00000519054 TRAV36DV7A0A075B6V5 113 aa0.24□□□□□ -2.37
SKP1-205ENST00000519054 TRAV2A0A0B4J234 112 aa0.24□□□□□ -2.37
SKP1-205ENST00000519054 HIST1H2BKO60814 126 aa0.24□□□□□ -2.37
SKP1-205ENST00000519054 CST7O76096 145 aa0.24□□□□□ -2.37
SKP1-205ENST00000519054 PPYP01298 95 aa0.24□□□□□ -2.37
SKP1-205ENST00000519054 HIST1H2BJP06899 126 aa0.24□□□□□ -2.37
SKP1-205ENST00000519054 CD14P08571 375 aa0.24□□□□□ -2.37
SKP1-205ENST00000519054 SFTA3P0C7M3 94 aa0.24□□□□□ -2.37
SKP1-205ENST00000519054 GUCA1AP43080 201 aaPredicted RBP0.24□□□□□ -2.37
SKP1-205ENST00000519054 RPS29P62273 56 aaKnown RBP0.24□□□□□ -2.37
SKP1-205ENST00000519054 HBBP68871 147 aa0.24□□□□□ -2.37
SKP1-205ENST00000519054 MIR22HGQ0VDD5 57 aa0.24□□□□□ -2.37
SKP1-205ENST00000519054 SPINK13Q1W4C9 94 aa0.24□□□□□ -2.37
SKP1-205ENST00000519054 ENHOQ6UWT2 76 aa0.24□□□□□ -2.37
SKP1-205ENST00000519054 FOXI2Q6ZQN5 318 aa0.24□□□□□ -2.37
SKP1-205ENST00000519054 JPT1Q9UK76 154 aa0.24□□□□□ -2.37
SKP1-205ENST00000519054 TRGV1A0A0A0MS02 117 aa0.23□□□□□ -2.37
SKP1-205ENST00000519054 GNG14A0A1W2PPG7 69 aa0.23□□□□□ -2.37
SKP1-205ENST00000519054 H7BYZ3 331 aa0.23□□□□□ -2.37
SKP1-205ENST00000519054 NEFHP12036 1026 aa0.23□□□□□ -2.37
SKP1-205ENST00000519054 COPZ1P61923 177 aa0.23□□□□□ -2.37
SKP1-205ENST00000519054 KRTAP6-1Q3LI64 71 aa0.23□□□□□ -2.37
SKP1-205ENST00000519054 PRR15Q8IV56 129 aa0.23□□□□□ -2.37
SKP1-205ENST00000519054 TTC9CQ8N5M4 171 aa0.23□□□□□ -2.37
SKP1-205ENST00000519054 OR10AC1Q8NH08 325 aa0.23□□□□□ -2.37
SKP1-205ENST00000519054 TMEM167AQ8TBQ9 72 aa0.23□□□□□ -2.37
SKP1-205ENST00000519054 PBDC1Q9BVG4 233 aa0.23□□□□□ -2.37
SKP1-205ENST00000519054 LINC00474Q9P2X8 69 aa0.23□□□□□ -2.37
SKP1-205ENST00000519054 A0A096LPI6 279 aa0.22□□□□□ -2.37
SKP1-205ENST00000519054 TRBV7-1A0A0A6YYK4 115 aa0.22□□□□□ -2.37
SKP1-205ENST00000519054 I3L2K1 104 aa0.22□□□□□ -2.37
SKP1-205ENST00000519054 M0R135 149 aa0.22□□□□□ -2.37
SKP1-205ENST00000519054 APOA2P02652 100 aa0.22□□□□□ -2.37
SKP1-205ENST00000519054 ZNF137PP52743 207 aa0.22□□□□□ -2.37
SKP1-205ENST00000519054 FOXA3P55318 350 aaPredicted RBP0.22□□□□□ -2.37
SKP1-205ENST00000519054 SPATA45Q537H7 98 aa0.22□□□□□ -2.37
SKP1-205ENST00000519054 SPATA8Q6RVD6 105 aa0.22□□□□□ -2.37
SKP1-205ENST00000519054 ZNF431Q8TF32 576 aaPredicted RBP0.22□□□□□ -2.37
SKP1-205ENST00000519054 TMEM263Q8WUH6 116 aaKnown RBP0.22□□□□□ -2.37
SKP1-205ENST00000519054 MT1LQ93083 61 aa0.22□□□□□ -2.37
SKP1-205ENST00000519054 LIMD2Q9BT23 127 aa0.22□□□□□ -2.37
SKP1-205ENST00000519054 DPY30Q9C005 99 aa0.22□□□□□ -2.37
SKP1-205ENST00000519054 RERGLQ9H628 205 aa0.22□□□□□ -2.37
SKP1-205ENST00000519054 IL20Q9NYY1 176 aa0.22□□□□□ -2.37
SKP1-205ENST00000519054 MPC1Q9Y5U8 109 aa0.22□□□□□ -2.37
SKP1-205ENST00000519054 TRAV23DV6A0A075B6W5 121 aa0.21□□□□□ -2.38
SKP1-205ENST00000519054 FAM236AA0A1B0GUQ0 79 aa0.21□□□□□ -2.38
SKP1-205ENST00000519054 FAM236BA0A1B0GV22 79 aa0.21□□□□□ -2.38
SKP1-205ENST00000519054 A0A1B0GWA3 101 aa0.21□□□□□ -2.38
SKP1-205ENST00000519054 KPNA4O00629 521 aaPredicted RBP0.21□□□□□ -2.38
SKP1-205ENST00000519054 G0S2P27469 103 aa0.21□□□□□ -2.38
SKP1-205ENST00000519054 ETV6P41212 452 aa0.21□□□□□ -2.38
SKP1-205ENST00000519054 PPP1R2P41236 205 aa0.21□□□□□ -2.38
SKP1-205ENST00000519054 RPL35P42766 123 aaKnown RBP0.21□□□□□ -2.38
SKP1-205ENST00000519054 FXYD4P59646 89 aa0.21□□□□□ -2.38
SKP1-205ENST00000519054 VBP1P61758 197 aa0.21□□□□□ -2.38
SKP1-205ENST00000519054 SNRPD3P62318 126 aaKnown RBP0.21□□□□□ -2.38
SKP1-205ENST00000519054 PPP1R2P3Q6NXS1 205 aa0.21□□□□□ -2.38
SKP1-205ENST00000519054 CLPSL2Q6UWE3 100 aa0.21□□□□□ -2.38
SKP1-205ENST00000519054 ATP11AUNQ6ZP68 121 aa0.21□□□□□ -2.38
SKP1-205ENST00000519054 IDO2Q6ZQW0 420 aa0.21□□□□□ -2.38
SKP1-205ENST00000519054 Q86TA4 180 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms