RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 LINC01546A6NGU7 62 aa6.92□□□□□ -1.3
TRAPPC9-203ENST00000517667 ATP5LO75964 103 aa6.92□□□□□ -1.3
TRAPPC9-203ENST00000517667 RPL18AQ02543 176 aaKnown RBP6.92□□□□□ -1.3
TRAPPC9-203ENST00000517667 SMAGPQ0VAQ4 97 aa6.92□□□□□ -1.3
TRAPPC9-203ENST00000517667 CAMK2N2Q96S95 79 aa6.92□□□□□ -1.3
TRAPPC9-203ENST00000517667 SDHAF1A6NFY7 115 aa6.91□□□□□ -1.3
TRAPPC9-203ENST00000517667 SCGB1D1O95968 90 aa6.91□□□□□ -1.3
TRAPPC9-203ENST00000517667 MALP21145 153 aa6.91□□□□□ -1.3
TRAPPC9-203ENST00000517667 LINC00310P59036 64 aa6.91□□□□□ -1.3
TRAPPC9-203ENST00000517667 KRTDAPP60985 99 aa6.91□□□□□ -1.3
TRAPPC9-203ENST00000517667 JOSD1Q15040 202 aaPredicted RBP6.91□□□□□ -1.3
TRAPPC9-203ENST00000517667 PMCHL1Q16048 86 aa6.91□□□□□ -1.3
TRAPPC9-203ENST00000517667 PHF5AQ7RTV0 110 aaKnown RBP6.91□□□□□ -1.3
TRAPPC9-203ENST00000517667 FAM19A2Q8N3H0 131 aa6.91□□□□□ -1.3
TRAPPC9-203ENST00000517667 TRBV27A0A0K0K1C4 114 aa6.9□□□□□ -1.3
TRAPPC9-203ENST00000517667 IFITM10A6NMD0 228 aa6.9□□□□□ -1.3
TRAPPC9-203ENST00000517667 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.9□□□□□ -1.3
TRAPPC9-203ENST00000517667 I3L3M4 83 aa6.9□□□□□ -1.3
TRAPPC9-203ENST00000517667 NUPR1O60356 82 aa6.9□□□□□ -1.3
TRAPPC9-203ENST00000517667 RPL39LQ96EH5 51 aaKnown RBP6.9□□□□□ -1.3
TRAPPC9-203ENST00000517667 C2orf48Q96LS8 159 aa6.9□□□□□ -1.3
TRAPPC9-203ENST00000517667 C12orf57Q99622 126 aa6.9□□□□□ -1.3
TRAPPC9-203ENST00000517667 A0A087WZ39 114 aa6.89□□□□□ -1.31
TRAPPC9-203ENST00000517667 COX7A2LO14548 114 aa6.89□□□□□ -1.31
TRAPPC9-203ENST00000517667 KRTAP1-4P0C5Y4 121 aa6.89□□□□□ -1.31
TRAPPC9-203ENST00000517667 PAPPA-AS1Q5QFB9 102 aa6.89□□□□□ -1.31
TRAPPC9-203ENST00000517667 PET117Q6UWS5 81 aa6.89□□□□□ -1.31
TRAPPC9-203ENST00000517667 CDC42SE2Q9NRR3 84 aa6.89□□□□□ -1.31
TRAPPC9-203ENST00000517667 CYSLTR1Q9Y271 337 aa6.89□□□□□ -1.31
TRAPPC9-203ENST00000517667 POLR2KP53803 58 aaKnown RBP6.88□□□□□ -1.31
TRAPPC9-203ENST00000517667 RNF151Q2KHN1 245 aa6.88□□□□□ -1.31
TRAPPC9-203ENST00000517667 MRPL52Q86TS9 123 aaKnown RBP6.88□□□□□ -1.31
TRAPPC9-203ENST00000517667 LINC00518Q8N0U6 118 aa6.88□□□□□ -1.31
TRAPPC9-203ENST00000517667 URB1-AS1Q96HZ7 61 aa6.88□□□□□ -1.31
TRAPPC9-203ENST00000517667 HSBP1L1C9JCN9 74 aa6.87□□□□□ -1.31
TRAPPC9-203ENST00000517667 Q6ZN92 141 aa6.87□□□□□ -1.31
TRAPPC9-203ENST00000517667 IFI27L1Q96BM0 104 aa6.87□□□□□ -1.31
TRAPPC9-203ENST00000517667 SYS1-DBNDD2H3BUS1 97 aa6.86□□□□□ -1.31
TRAPPC9-203ENST00000517667 C3orf79P0CE67 100 aa6.86□□□□□ -1.31
TRAPPC9-203ENST00000517667 PYY3Q5JQD4 70 aa6.86□□□□□ -1.31
TRAPPC9-203ENST00000517667 C2orf66Q6UXQ4 117 aa6.86□□□□□ -1.31
TRAPPC9-203ENST00000517667 TOMM6Q96B49 74 aa6.86□□□□□ -1.31
TRAPPC9-203ENST00000517667 TSTD3H0UI37 97 aa6.85□□□□□ -1.31
TRAPPC9-203ENST00000517667 TSHBP01222 138 aa6.85□□□□□ -1.31
TRAPPC9-203ENST00000517667 NPSP0C0P6 89 aa6.85□□□□□ -1.31
TRAPPC9-203ENST00000517667 TMEM141Q96I45 108 aa6.85□□□□□ -1.31
TRAPPC9-203ENST00000517667 SCGB3A1Q96QR1 104 aa6.85□□□□□ -1.31
TRAPPC9-203ENST00000517667 OPRPNQ99935 248 aaPredicted RBP6.85□□□□□ -1.31
TRAPPC9-203ENST00000517667 F8WDY8 70 aa6.84□□□□□ -1.31
TRAPPC9-203ENST00000517667 SPAG11BQ08648 103 aa6.84□□□□□ -1.31
TRAPPC9-203ENST00000517667 ERASQ7Z444 233 aa6.84□□□□□ -1.31
TRAPPC9-203ENST00000517667 TIMM17AQ99595 171 aa6.84□□□□□ -1.31
TRAPPC9-203ENST00000517667 VAMP8Q9BV40 100 aa6.84□□□□□ -1.31
TRAPPC9-203ENST00000517667 MRPL35Q9NZE8 188 aaKnown RBP6.84□□□□□ -1.31
TRAPPC9-203ENST00000517667 H0Y8G0 127 aa6.83□□□□□ -1.32
TRAPPC9-203ENST00000517667 CSDC2Q9Y534 153 aaKnown RBP6.83□□□□□ -1.32
TRAPPC9-203ENST00000517667 A0A096LNJ9 63 aa6.82□□□□□ -1.32
TRAPPC9-203ENST00000517667 FAM168BA1KXE4 195 aa6.82□□□□□ -1.32
TRAPPC9-203ENST00000517667 TLX1NBP0CAT3 122 aa6.82□□□□□ -1.32
TRAPPC9-203ENST00000517667 PLNP26678 52 aa6.82□□□□□ -1.32
TRAPPC9-203ENST00000517667 UBE2BP63146 152 aa6.82□□□□□ -1.32
TRAPPC9-203ENST00000517667 FAM19A5Q7Z5A7 132 aaPredicted RBP6.82□□□□□ -1.32
TRAPPC9-203ENST00000517667 KRTAP11-1Q8IUC1 163 aa6.82□□□□□ -1.32
TRAPPC9-203ENST00000517667 SPANXA1Q9NS26 97 aa6.82□□□□□ -1.32
TRAPPC9-203ENST00000517667 TRAV13-1A0A0B4J241 112 aa6.81□□□□□ -1.32
TRAPPC9-203ENST00000517667 TRAV12-1A0A0B4J245 112 aa6.81□□□□□ -1.32
TRAPPC9-203ENST00000517667 NDUFA1O15239 70 aa6.81□□□□□ -1.32
TRAPPC9-203ENST00000517667 LINC01545Q5VT33 79 aa6.81□□□□□ -1.32
TRAPPC9-203ENST00000517667 TEX43Q6ZNM6 134 aa6.81□□□□□ -1.32
TRAPPC9-203ENST00000517667 C5orf38Q86SI9 138 aa6.81□□□□□ -1.32
TRAPPC9-203ENST00000517667 PYGO1Q9Y3Y4 419 aa6.81□□□□□ -1.32
TRAPPC9-203ENST00000517667 M0QXV9 152 aa6.8□□□□□ -1.32
TRAPPC9-203ENST00000517667 TSPAN13O95857 204 aa6.8□□□□□ -1.32
TRAPPC9-203ENST00000517667 C2orf88Q9BSF0 95 aa6.8□□□□□ -1.32
TRAPPC9-203ENST00000517667 DPM2O94777 84 aa6.79□□□□□ -1.32
TRAPPC9-203ENST00000517667 PMVKQ15126 192 aa6.79□□□□□ -1.32
TRAPPC9-203ENST00000517667 ORAOV1Q8WV07 137 aa6.79□□□□□ -1.32
TRAPPC9-203ENST00000517667 TIMM21Q9BVV7 248 aa6.79□□□□□ -1.32
TRAPPC9-203ENST00000517667 UBE2D4Q9Y2X8 147 aa6.79□□□□□ -1.32
TRAPPC9-203ENST00000517667 F8VRH5 84 aa6.78□□□□□ -1.32
TRAPPC9-203ENST00000517667 ZNF861PO60384 105 aa6.78□□□□□ -1.32
TRAPPC9-203ENST00000517667 IGKCP01834 107 aa6.78□□□□□ -1.32
TRAPPC9-203ENST00000517667 GAGE2EQ4V326 116 aa6.78□□□□□ -1.32
TRAPPC9-203ENST00000517667 RNASE13Q5GAN3 156 aaKnown RBP6.78□□□□□ -1.32
TRAPPC9-203ENST00000517667 LINC00173Q6ZV60 143 aa6.78□□□□□ -1.32
TRAPPC9-203ENST00000517667 VCX2Q9H322 139 aa6.78□□□□□ -1.32
TRAPPC9-203ENST00000517667 GAGE2DQ9UEU5 116 aa6.78□□□□□ -1.32
TRAPPC9-203ENST00000517667 CHTOPQ9Y3Y2 248 aaKnown RBP6.78□□□□□ -1.32
TRAPPC9-203ENST00000517667 HERVK_113P61574 105 aa6.77□□□□□ -1.33
TRAPPC9-203ENST00000517667 SEC11AP67812 179 aa6.77□□□□□ -1.33
TRAPPC9-203ENST00000517667 SPATA45Q537H7 98 aa6.77□□□□□ -1.33
TRAPPC9-203ENST00000517667 PAM16Q9Y3D7 125 aa6.77□□□□□ -1.33
TRAPPC9-203ENST00000517667 IGIPA6NJ69 53 aa6.76□□□□□ -1.33
TRAPPC9-203ENST00000517667 RPL39P62891 51 aaKnown RBP6.76□□□□□ -1.33
TRAPPC9-203ENST00000517667 MRPS36P82909 103 aaKnown RBP6.76□□□□□ -1.33
TRAPPC9-203ENST00000517667 Q6ZUT4 128 aa6.76□□□□□ -1.33
TRAPPC9-203ENST00000517667 C6orf48Q9UBA6 75 aa6.76□□□□□ -1.33
TRAPPC9-203ENST00000517667 IGHV3OR16-9A0A0B4J2B5 98 aa6.75□□□□□ -1.33
TRAPPC9-203ENST00000517667 C10orf25Q5T742 122 aa6.75□□□□□ -1.33
TRAPPC9-203ENST00000517667 UNQ6190/PRO20217Q6UXQ8 127 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 159.6 ms