RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 PRSS2P07478 247 aa15.26■□□□□ 0.03
PVT1-204ENST00000517525 YPEL4Q96NS1 127 aa15.26■□□□□ 0.03
PVT1-204ENST00000517525 SRSF9Q13242 221 aaKnown RBP eCLIP15.25■□□□□ 0.034e-6■■■■□ 20.8
PVT1-204ENST00000517525 PMVKQ15126 192 aa15.25■□□□□ 0.03
PVT1-204ENST00000517525 C6orf226Q5I0X4 101 aa15.25■□□□□ 0.03
PVT1-204ENST00000517525 URB1-AS1Q96HZ7 61 aa15.25■□□□□ 0.03
PVT1-204ENST00000517525 LINC00614P0C842 121 aa15.24■□□□□ 0.03
PVT1-204ENST00000517525 MT1HL1P0DM35 61 aa15.24■□□□□ 0.03
PVT1-204ENST00000517525 SPINK6Q6UWN8 80 aa15.24■□□□□ 0.03
PVT1-204ENST00000517525 A0A096LNJ9 63 aa15.23■□□□□ 0.03
PVT1-204ENST00000517525 CKS1BP61024 79 aa15.23■□□□□ 0.03
PVT1-204ENST00000517525 PDZD11Q5EBL8 140 aa15.22■□□□□ 0.03
PVT1-204ENST00000517525 LINC00469Q8N7U9 141 aa15.22■□□□□ 0.03
PVT1-204ENST00000517525 TOMM7Q9P0U1 55 aa15.22■□□□□ 0.03
PVT1-204ENST00000517525 SMIM1B2RUZ4 78 aa15.21■□□□□ 0.03
PVT1-204ENST00000517525 CXCL5P42830 114 aa15.21■□□□□ 0.03
PVT1-204ENST00000517525 GAGE2EQ4V326 116 aa15.21■□□□□ 0.03
PVT1-204ENST00000517525 SERTAD4-AS1Q5TG53 156 aa15.21■□□□□ 0.03
PVT1-204ENST00000517525 GAGE2DQ9UEU5 116 aa15.21■□□□□ 0.03
PVT1-204ENST00000517525 RAB5BP61020 215 aa15.2■□□□□ 0.02
PVT1-204ENST00000517525 ODF1Q14990 250 aa15.2■□□□□ 0.02
PVT1-204ENST00000517525 PHF5AQ7RTV0 110 aaKnown RBP15.2■□□□□ 0.02
PVT1-204ENST00000517525 F8VRH5 84 aa15.19■□□□□ 0.02
PVT1-204ENST00000517525 PSORS1C2Q9UIG4 136 aa15.19■□□□□ 0.02
PVT1-204ENST00000517525 FAM168BA1KXE4 195 aa15.18■□□□□ 0.02
PVT1-204ENST00000517525 HBDP02042 147 aa15.18■□□□□ 0.02
PVT1-204ENST00000517525 KRTAP7-1Q8IUC3 87 aa15.18■□□□□ 0.02
PVT1-204ENST00000517525 LINC01600Q96MT4 127 aa15.17■□□□□ 0.02
PVT1-204ENST00000517525 IGLC3P0DOY3 106 aa15.16■□□□□ 0.02
PVT1-204ENST00000517525 C9orf129Q5T035 196 aaKnown RBP15.16■□□□□ 0.02
PVT1-204ENST00000517525 COX7B2Q8TF08 81 aa15.14■□□□□ 0.01
PVT1-204ENST00000517525 H3BRM9 83 aa15.13■□□□□ 0.01
PVT1-204ENST00000517525 ATP5LO75964 103 aa15.13■□□□□ 0.01
PVT1-204ENST00000517525 REG3GQ6UW15 175 aa15.13■□□□□ 0.01
PVT1-204ENST00000517525 FAM19A5Q7Z5A7 132 aaPredicted RBP15.13■□□□□ 0.01
PVT1-204ENST00000517525 M0QXV9 152 aa15.1■□□□□ 0.01
PVT1-204ENST00000517525 CHCHD1Q96BP2 118 aaKnown RBP15.1■□□□□ 0.01
PVT1-204ENST00000517525 IGLV5-39A0A0G2JS06 123 aa15.09■□□□□ 0.01
PVT1-204ENST00000517525 SPINK8P0C7L1 97 aa15.09■□□□□ 0.01
PVT1-204ENST00000517525 PMCHL1Q16048 86 aa15.09■□□□□ 0.01
PVT1-204ENST00000517525 C1orf137Q5JT78 98 aa15.09■□□□□ 0.01
PVT1-204ENST00000517525 KRTAP11-1Q8IUC1 163 aa15.09■□□□□ 0.01
PVT1-204ENST00000517525 CBLN2Q8IUK8 224 aa15.07■□□□□ 0
PVT1-204ENST00000517525 TNXBP22105 4242 aa15.06■□□□□ 0
PVT1-204ENST00000517525 IGLV7-43P04211 117 aa15.06■□□□□ 0
PVT1-204ENST00000517525 ZNF22P17026 224 aaPredicted RBP15.06■□□□□ 0
PVT1-204ENST00000517525 NDUFA6P56556 154 aa15.06■□□□□ 0
PVT1-204ENST00000517525 KRTAP10-8P60410 259 aa15.05■□□□□ -0
PVT1-204ENST00000517525 BAGE3Q86Y29 109 aa15.04■□□□□ -0
PVT1-204ENST00000517525 XAGE1AQ9HD64 81 aa15.04■□□□□ -0
PVT1-204ENST00000517525 TP73-AS1Q9UF72 201 aa15.04■□□□□ -0
PVT1-204ENST00000517525 HMCN2Q8NDA2 5059 aa15.02■□□□□ -0
PVT1-204ENST00000517525 PLA2G2DQ9UNK4 145 aa15.02■□□□□ -0
PVT1-204ENST00000517525 C22orf24Q9Y442 160 aa15.02■□□□□ -0
PVT1-204ENST00000517525 TRAV12-1A0A0B4J245 112 aa15.01□□□□□ -0.01
PVT1-204ENST00000517525 UBE2BP63146 152 aa15.01□□□□□ -0.01
PVT1-204ENST00000517525 LBHQ53QV2 105 aaPredicted RBP15.01□□□□□ -0.01
PVT1-204ENST00000517525 SLC7A5P1Q8MH63 180 aa15.01□□□□□ -0.01
PVT1-204ENST00000517525 C11orf86A6NJI1 115 aa15□□□□□ -0.01
PVT1-204ENST00000517525 DIRC1Q969H9 104 aa15□□□□□ -0.01
PVT1-204ENST00000517525 IFI27L1Q96BM0 104 aa14.98□□□□□ -0.01
PVT1-204ENST00000517525 SFTA2Q6UW10 78 aa14.97□□□□□ -0.01
PVT1-204ENST00000517525 CHTOPQ9Y3Y2 248 aaKnown RBP14.97□□□□□ -0.01
PVT1-204ENST00000517525 IGLV5-37A0A075B6J1 123 aa14.96□□□□□ -0.01
PVT1-204ENST00000517525 TRGC2P03986 189 aa14.96□□□□□ -0.01
PVT1-204ENST00000517525 H0Y9J4 135 aa14.95□□□□□ -0.02
PVT1-204ENST00000517525 NUPR1O60356 82 aa14.95□□□□□ -0.02
PVT1-204ENST00000517525 MRPL55Q7Z7F7 128 aaKnown RBP14.95□□□□□ -0.02
PVT1-204ENST00000517525 HSBP1O75506 76 aa14.94□□□□□ -0.02
PVT1-204ENST00000517525 COX17Q14061 63 aa14.94□□□□□ -0.02
PVT1-204ENST00000517525 TMEM170BQ5T4T1 132 aa14.94□□□□□ -0.02
PVT1-204ENST00000517525 COLCA2A8K830 154 aa14.92□□□□□ -0.02
PVT1-204ENST00000517525 ZNF625Q96I27 306 aaPredicted RBP14.9□□□□□ -0.02
PVT1-204ENST00000517525 ERG28Q9UKR5 140 aa14.9□□□□□ -0.02
PVT1-204ENST00000517525 TMEM223A0PJW6 202 aa14.89□□□□□ -0.03
PVT1-204ENST00000517525 LINC00310P59036 64 aa14.89□□□□□ -0.03
PVT1-204ENST00000517525 FAM19A2Q8N3H0 131 aa14.89□□□□□ -0.03
PVT1-204ENST00000517525 ZNF861PO60384 105 aa14.88□□□□□ -0.03
PVT1-204ENST00000517525 LINC00167Q96N53 147 aa14.88□□□□□ -0.03
PVT1-204ENST00000517525 PFN2P35080 140 aa14.87□□□□□ -0.03
PVT1-204ENST00000517525 SERF1AO75920 110 aa14.86□□□□□ -0.03
PVT1-204ENST00000517525 KRTAP1-4P0C5Y4 121 aa14.85□□□□□ -0.03
PVT1-204ENST00000517525 SND1-IT1Q9HBX3 110 aa14.85□□□□□ -0.03
PVT1-204ENST00000517525 LEPROTL1O95214 131 aa14.84□□□□□ -0.03
PVT1-204ENST00000517525 BCE1O60756 84 aa14.83□□□□□ -0.04
PVT1-204ENST00000517525 NKAPP1Q8N9T2 125 aa14.83□□□□□ -0.04
PVT1-204ENST00000517525 IGLV1-50A0A075B6I6 118 aa14.82□□□□□ -0.04
PVT1-204ENST00000517525 VPREB1P12018 145 aa14.81□□□□□ -0.04
PVT1-204ENST00000517525 RPL37AP8A6NKH3 93 aa14.79□□□□□ -0.04
PVT1-204ENST00000517525 RPL28P46779 137 aaKnown RBP14.79□□□□□ -0.04
PVT1-204ENST00000517525 RPL24P83731 157 aaKnown RBP14.79□□□□□ -0.04
PVT1-204ENST00000517525 HSPB8Q9UJY1 196 aa14.79□□□□□ -0.04
PVT1-204ENST00000517525 PRR26Q8N8Z3 221 aa14.78□□□□□ -0.04
PVT1-204ENST00000517525 UBR4Q5T4S7 5183 aa14.78□□□□□ -0.04
PVT1-204ENST00000517525 GAGE10A6NGK3 116 aa14.77□□□□□ -0.05
PVT1-204ENST00000517525 HERV-K104P63124 156 aa14.76□□□□□ -0.05
PVT1-204ENST00000517525 PLNP26678 52 aa14.75□□□□□ -0.05
PVT1-204ENST00000517525 KRTAP13-1Q8IUC0 172 aa14.75□□□□□ -0.05
PVT1-204ENST00000517525 LINC00587B1AMM8 73 aa14.73□□□□□ -0.05
PVT1-204ENST00000517525 RPL13AP40429 203 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms