RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 TMEM2Q9UHN6 1383 aa-3.9□□□□□ -3.03
SCARNA23-201ENST00000516060 A0A1W2PRE2 83 aa-3.91□□□□□ -3.04
SCARNA23-201ENST00000516060 DMDP11532 3685 aa-3.91□□□□□ -3.04
SCARNA23-201ENST00000516060 PRLHP81277 87 aa-3.91□□□□□ -3.04
SCARNA23-201ENST00000516060 TMEM78Q5T7P6 136 aa-3.91□□□□□ -3.04
SCARNA23-201ENST00000516060 TPT1P8Q9HAU6 139 aa-3.91□□□□□ -3.04
SCARNA23-201ENST00000516060 TET3O43151 1660 aa-3.91□□□□□ -3.04
SCARNA23-201ENST00000516060 MYOM1P52179 1685 aa-3.91□□□□□ -3.04
SCARNA23-201ENST00000516060 CDKN2CP42773 168 aa-3.92□□□□□ -3.04
SCARNA23-201ENST00000516060 KRTAP8-1Q8IUC2 63 aa-3.92□□□□□ -3.04
SCARNA23-201ENST00000516060 CTAGE3PQ8IX95 158 aa-3.92□□□□□ -3.04
SCARNA23-201ENST00000516060 MGST2Q99735 147 aa-3.92□□□□□ -3.04
SCARNA23-201ENST00000516060 PARVGQ9HBI0 331 aa-3.92□□□□□ -3.04
SCARNA23-201ENST00000516060 FAIMQ9NVQ4 179 aa-3.92□□□□□ -3.04
SCARNA23-201ENST00000516060 RGPD2P0DJD1 1756 aa-3.92□□□□□ -3.04
SCARNA23-201ENST00000516060 NLRP1Q9C000 1473 aa-3.92□□□□□ -3.04
SCARNA23-201ENST00000516060 C4AP0C0L4 1744 aa-3.92□□□□□ -3.04
SCARNA23-201ENST00000516060 C4BP0C0L5 1744 aa-3.92□□□□□ -3.04
SCARNA23-201ENST00000516060 SNCGO76070 127 aa-3.93□□□□□ -3.04
SCARNA23-201ENST00000516060 SPTSSAQ969W0 71 aa-3.93□□□□□ -3.04
SCARNA23-201ENST00000516060 PPP1R14BQ96C90 147 aa-3.93□□□□□ -3.04
SCARNA23-201ENST00000516060 SAR1AQ9NR31 198 aa-3.93□□□□□ -3.04
SCARNA23-201ENST00000516060 COPZ2Q9P299 210 aa-3.93□□□□□ -3.04
SCARNA23-201ENST00000516060 LRRC37AA6NMS7 1700 aa-3.93□□□□□ -3.04
SCARNA23-201ENST00000516060 A0A1B0GU69 56 aa-3.94□□□□□ -3.04
SCARNA23-201ENST00000516060 M0R129 80 aa-3.94□□□□□ -3.04
SCARNA23-201ENST00000516060 NDUFB6O95139 128 aa-3.94□□□□□ -3.04
SCARNA23-201ENST00000516060 HIST1H1DP16402 221 aaKnown RBP-3.94□□□□□ -3.04
SCARNA23-201ENST00000516060 RRAS2P62070 204 aaPredicted RBP-3.94□□□□□ -3.04
SCARNA23-201ENST00000516060 C5orf38Q86SI9 138 aa-3.94□□□□□ -3.04
SCARNA23-201ENST00000516060 TAC4Q86UU9 113 aa-3.94□□□□□ -3.04
SCARNA23-201ENST00000516060 MAGOHBQ96A72 148 aaKnown RBP-3.94□□□□□ -3.04
SCARNA23-201ENST00000516060 CEP19Q96LK0 163 aa-3.94□□□□□ -3.04
SCARNA23-201ENST00000516060 PSME4Q14997 1843 aa-3.94□□□□□ -3.04
SCARNA23-201ENST00000516060 SYNJ1O43426 1573 aa-3.94□□□□□ -3.04
SCARNA23-201ENST00000516060 EDC4Q6P2E9 1401 aaKnown RBP-3.95□□□□□ -3.04
SCARNA23-201ENST00000516060 NEFHP12036 1026 aa-3.95□□□□□ -3.04
SCARNA23-201ENST00000516060 MRPL54Q6P161 138 aaKnown RBP-3.95□□□□□ -3.04
SCARNA23-201ENST00000516060 NXT2Q9NPJ8 142 aaKnown RBP-3.95□□□□□ -3.04
SCARNA23-201ENST00000516060 SPEGQ15772 3267 aa-3.95□□□□□ -3.04
SCARNA23-201ENST00000516060 LOC285095A0A1B0GVY8 99 aa-3.96□□□□□ -3.04
SCARNA23-201ENST00000516060 SERPINB1P30740 379 aa-3.96□□□□□ -3.04
SCARNA23-201ENST00000516060 MNS1Q8NEH6 495 aa-3.96□□□□□ -3.04
SCARNA23-201ENST00000516060 SYNMO15061 1565 aa-3.97□□□□□ -3.04
SCARNA23-201ENST00000516060 ZNF518AQ6AHZ1 1483 aa-3.97□□□□□ -3.04
SCARNA23-201ENST00000516060 PFDN1O60925 122 aa-3.97□□□□□ -3.04
SCARNA23-201ENST00000516060 CTXN2P0C2S0 81 aa-3.97□□□□□ -3.04
SCARNA23-201ENST00000516060 WHAMMP3Q1A5X7 153 aa-3.97□□□□□ -3.04
SCARNA23-201ENST00000516060 OR8I2Q8N0Y5 310 aa-3.97□□□□□ -3.04
SCARNA23-201ENST00000516060 EIF3AQ14152 1382 aaKnown RBP-3.98□□□□□ -3.05
SCARNA23-201ENST00000516060 ANKRD30AQ9BXX3 1397 aa-3.98□□□□□ -3.05
SCARNA23-201ENST00000516060 SNCAP37840 140 aa-3.98□□□□□ -3.05
SCARNA23-201ENST00000516060 REEP5Q00765 189 aa-3.98□□□□□ -3.05
SCARNA23-201ENST00000516060 OR9Q1Q8NGQ5 310 aa-3.98□□□□□ -3.05
SCARNA23-201ENST00000516060 WDFY3Q8IZQ1 3526 aa-3.98□□□□□ -3.05
SCARNA23-201ENST00000516060 RGS21Q2M5E4 152 aa-3.99□□□□□ -3.05
SCARNA23-201ENST00000516060 PTRHD1Q6GMV3 140 aaKnown RBP-3.99□□□□□ -3.05
SCARNA23-201ENST00000516060 FAM223AQ8IWN6 122 aa-3.99□□□□□ -3.05
SCARNA23-201ENST00000516060 PDCD11Q14690 1871 aaKnown RBP-4□□□□□ -3.05
SCARNA23-201ENST00000516060 NUP188Q5SRE5 1749 aa-4□□□□□ -3.05
SCARNA23-201ENST00000516060 NCS1P62166 190 aa-4□□□□□ -3.05
SCARNA23-201ENST00000516060 TCTE3Q8IZS6 198 aa-4□□□□□ -3.05
SCARNA23-201ENST00000516060 TSLPQ969D9 159 aa-4□□□□□ -3.05
SCARNA23-201ENST00000516060 PSMG3Q9BT73 122 aaPredicted RBP-4□□□□□ -3.05
SCARNA23-201ENST00000516060 V9GYQ6 96 aa-4□□□□□ -3.05
SCARNA23-201ENST00000516060 CFAP54Q96N23 3096 aa-4.01□□□□□ -3.05
SCARNA23-201ENST00000516060 SPTY2D1-AS1A0A0U1RR47 76 aa-4.01□□□□□ -3.05
SCARNA23-201ENST00000516060 MYOZ3Q8TDC0 251 aa-4.01□□□□□ -3.05
SCARNA23-201ENST00000516060 PTMSP20962 102 aa-4.02□□□□□ -3.05
SCARNA23-201ENST00000516060 TMEM191AQ9H0A3 160 aa-4.02□□□□□ -3.05
SCARNA23-201ENST00000516060 SMG6Q86US8 1419 aaKnown RBP-4.03□□□□□ -3.05
SCARNA23-201ENST00000516060 SCN7AQ01118 1682 aa-4.03□□□□□ -3.05
SCARNA23-201ENST00000516060 TMEM238C9JI98 176 aa-4.03□□□□□ -3.05
SCARNA23-201ENST00000516060 M0QX08 132 aa-4.03□□□□□ -3.05
SCARNA23-201ENST00000516060 DEFB4AO15263 64 aa-4.03□□□□□ -3.05
SCARNA23-201ENST00000516060 FAM236AA0A1B0GUQ0 79 aa-4.04□□□□□ -3.06
SCARNA23-201ENST00000516060 FAM236BA0A1B0GV22 79 aa-4.04□□□□□ -3.06
SCARNA23-201ENST00000516060 HIST1H1AQ02539 215 aaPredicted RBP-4.04□□□□□ -3.06
SCARNA23-201ENST00000516060 C6orf201Q7Z4U5 140 aa-4.04□□□□□ -3.06
SCARNA23-201ENST00000516060 ARL2-SNX15V9GYD0 113 aa-4.04□□□□□ -3.06
SCARNA23-201ENST00000516060 TIAM2Q8IVF5 1701 aa-4.04□□□□□ -3.06
SCARNA23-201ENST00000516060 MAGI2Q86UL8 1455 aa-4.05□□□□□ -3.06
SCARNA23-201ENST00000516060 SCTP09683 121 aa-4.05□□□□□ -3.06
SCARNA23-201ENST00000516060 TMEM35BQ8NCS4 154 aa-4.05□□□□□ -3.06
SCARNA23-201ENST00000516060 BOLA2Q9H3K6 86 aa-4.05□□□□□ -3.06
SCARNA23-201ENST00000516060 UBE2D4Q9Y2X8 147 aa-4.05□□□□□ -3.06
SCARNA23-201ENST00000516060 ADGRL2O95490 1459 aa-4.05□□□□□ -3.06
SCARNA23-201ENST00000516060 SPEF2Q9C093 1822 aa-4.06□□□□□ -3.06
SCARNA23-201ENST00000516060 CDK5RAP2Q96SN8 1893 aa-4.06□□□□□ -3.06
SCARNA23-201ENST00000516060 TNFSF15O95150 251 aa-4.06□□□□□ -3.06
SCARNA23-201ENST00000516060 NDUFA3O95167 84 aa-4.06□□□□□ -3.06
SCARNA23-201ENST00000516060 NMSQ5H8A3 153 aa-4.06□□□□□ -3.06
SCARNA23-201ENST00000516060 MAPKBP1O60336 1514 aa-4.06□□□□□ -3.06
SCARNA23-201ENST00000516060 HOPXQ9BPY8 73 aaPredicted RBP-4.08□□□□□ -3.06
SCARNA23-201ENST00000516060 HIGD1AQ9Y241 93 aa-4.08□□□□□ -3.06
SCARNA23-201ENST00000516060 EHBP1L1Q8N3D4 1523 aa-4.09□□□□□ -3.06
SCARNA23-201ENST00000516060 PIGBOS1A0A0B4J2F0 54 aa-4.09□□□□□ -3.06
SCARNA23-201ENST00000516060 A0A1B0GWA3 101 aa-4.09□□□□□ -3.06
SCARNA23-201ENST00000516060 CHKB-CPT1BH3BT56 60 aa-4.09□□□□□ -3.06
SCARNA23-201ENST00000516060 LINC00846Q9NV44 126 aa-4.09□□□□□ -3.06
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms