RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 AP1S3Q96PC3 154 aa2.03□□□□□ -2.08
PDLIM5-218ENST00000513341 IGKV2D-26A0A0A0MRZ7 120 aa2.02□□□□□ -2.09
PDLIM5-218ENST00000513341 E9PLD3 99 aa2.02□□□□□ -2.09
PDLIM5-218ENST00000513341 COX7A2LO14548 114 aa2.02□□□□□ -2.09
PDLIM5-218ENST00000513341 IL7P13232 177 aa2.02□□□□□ -2.09
PDLIM5-218ENST00000513341 NTF3P20783 257 aa2.02□□□□□ -2.09
PDLIM5-218ENST00000513341 GCHFRP30047 84 aa2.02□□□□□ -2.09
PDLIM5-218ENST00000513341 KRTAP13-2Q52LG2 175 aa2.02□□□□□ -2.09
PDLIM5-218ENST00000513341 LINC00299Q6ZSB3 139 aa2.02□□□□□ -2.09
PDLIM5-218ENST00000513341 Q86TA4 180 aa2.02□□□□□ -2.09
PDLIM5-218ENST00000513341 OR10D4PQ8NGN7 298 aa2.02□□□□□ -2.09
PDLIM5-218ENST00000513341 TCEAL7Q9BRU2 100 aa2.02□□□□□ -2.09
PDLIM5-218ENST00000513341 CDC42SE2Q9NRR3 84 aa2.02□□□□□ -2.09
PDLIM5-218ENST00000513341 V9GYY9 64 aa2.02□□□□□ -2.09
PDLIM5-218ENST00000513341 A0A1B0GWB2 263 aa2.01□□□□□ -2.09
PDLIM5-218ENST00000513341 F2Z2F3 143 aa2.01□□□□□ -2.09
PDLIM5-218ENST00000513341 KRTAP4-16G5E9R7 235 aaPredicted RBP2.01□□□□□ -2.09
PDLIM5-218ENST00000513341 M0QXV9 152 aa2.01□□□□□ -2.09
PDLIM5-218ENST00000513341 PEX7O00628 323 aa2.01□□□□□ -2.09
PDLIM5-218ENST00000513341 NDUFA1O15239 70 aa2.01□□□□□ -2.09
PDLIM5-218ENST00000513341 HMGB3O15347 200 aaKnown RBP2.01□□□□□ -2.09
PDLIM5-218ENST00000513341 PLA2G10O15496 165 aa2.01□□□□□ -2.09
PDLIM5-218ENST00000513341 LYRM1O43325 122 aa2.01□□□□□ -2.09
PDLIM5-218ENST00000513341 LTAP01374 205 aa2.01□□□□□ -2.09
PDLIM5-218ENST00000513341 TRGC1P0CF51 173 aa2.01□□□□□ -2.09
PDLIM5-218ENST00000513341 UBE2G1P62253 170 aa2.01□□□□□ -2.09
PDLIM5-218ENST00000513341 SERF2P84101 59 aa2.01□□□□□ -2.09
PDLIM5-218ENST00000513341 SMAGPQ0VAQ4 97 aa2.01□□□□□ -2.09
PDLIM5-218ENST00000513341 PDZD11Q5EBL8 140 aa2.01□□□□□ -2.09
PDLIM5-218ENST00000513341 TEX261Q6UWH6 196 aa2.01□□□□□ -2.09
PDLIM5-218ENST00000513341 FAM19A5Q7Z5A7 132 aaPredicted RBP2.01□□□□□ -2.09
PDLIM5-218ENST00000513341 MRPL52Q86TS9 123 aaKnown RBP2.01□□□□□ -2.09
PDLIM5-218ENST00000513341 DAND5Q8N907 189 aa2.01□□□□□ -2.09
PDLIM5-218ENST00000513341 S100ZQ8WXG8 99 aa2.01□□□□□ -2.09
PDLIM5-218ENST00000513341 CCDC32Q9BV29 185 aa2.01□□□□□ -2.09
PDLIM5-218ENST00000513341 LINC00846Q9NV44 126 aa2.01□□□□□ -2.09
PDLIM5-218ENST00000513341 TNFSF18Q9UNG2 199 aa2.01□□□□□ -2.09
PDLIM5-218ENST00000513341 A0A1B0GV72 72 aa2□□□□□ -2.09
PDLIM5-218ENST00000513341 I3L3M4 83 aa2□□□□□ -2.09
PDLIM5-218ENST00000513341 BCE1O60756 84 aa2□□□□□ -2.09
PDLIM5-218ENST00000513341 APCSP02743 223 aa2□□□□□ -2.09
PDLIM5-218ENST00000513341 LINC00614P0C842 121 aa2□□□□□ -2.09
PDLIM5-218ENST00000513341 BTCP35070 178 aa2□□□□□ -2.09
PDLIM5-218ENST00000513341 C9orf129Q5T035 196 aaKnown RBP2□□□□□ -2.09
PDLIM5-218ENST00000513341 SEC22CQ9BRL7 303 aa2□□□□□ -2.09
PDLIM5-218ENST00000513341 PSMG3Q9BT73 122 aaPredicted RBP2□□□□□ -2.09
PDLIM5-218ENST00000513341 ACTR3CQ9C0K3 210 aaPredicted RBP2□□□□□ -2.09
PDLIM5-218ENST00000513341 SMDT1Q9H4I9 107 aa2□□□□□ -2.09
PDLIM5-218ENST00000513341 TP73-AS1Q9UF72 201 aa2□□□□□ -2.09
PDLIM5-218ENST00000513341 HSPB11Q9Y547 144 aa2□□□□□ -2.09
PDLIM5-218ENST00000513341 ALG5Q9Y673 324 aa2□□□□□ -2.09
PDLIM5-218ENST00000513341 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.99□□□□□ -2.09
PDLIM5-218ENST00000513341 TRBV30A0A0K0K1B3 111 aa1.99□□□□□ -2.09
PDLIM5-218ENST00000513341 MUC21A0A140T8X8 626 aa1.99□□□□□ -2.09
PDLIM5-218ENST00000513341 IGKV2-29A2NJV5 120 aaPredicted RBP1.99□□□□□ -2.09
PDLIM5-218ENST00000513341 NDUFC2-KCTD14E9PQ53 114 aa1.99□□□□□ -2.09
PDLIM5-218ENST00000513341 UPK1BO75841 260 aa1.99□□□□□ -2.09
PDLIM5-218ENST00000513341 ATP5LO75964 103 aa1.99□□□□□ -2.09
PDLIM5-218ENST00000513341 SPINK1P00995 79 aa1.99□□□□□ -2.09
PDLIM5-218ENST00000513341 MGPP08493 103 aa1.99□□□□□ -2.09
PDLIM5-218ENST00000513341 IGLC6P0CF74 106 aa1.99□□□□□ -2.09
PDLIM5-218ENST00000513341 ATP6V0CP27449 155 aa1.99□□□□□ -2.09
PDLIM5-218ENST00000513341 CTRLP40313 264 aa1.99□□□□□ -2.09
PDLIM5-218ENST00000513341 DEFA1P59665 94 aa1.99□□□□□ -2.09
PDLIM5-218ENST00000513341 DEFA3P59666 94 aa1.99□□□□□ -2.09
PDLIM5-218ENST00000513341 RPS20P60866 119 aaKnown RBP1.99□□□□□ -2.09
PDLIM5-218ENST00000513341 SPAG11BQ08648 103 aa1.99□□□□□ -2.09
PDLIM5-218ENST00000513341 KRTAP6-3Q3LI67 103 aa1.99□□□□□ -2.09
PDLIM5-218ENST00000513341 Q6ZVH6 145 aa1.99□□□□□ -2.09
PDLIM5-218ENST00000513341 MTURNQ8N3F0 131 aa1.99□□□□□ -2.09
PDLIM5-218ENST00000513341 FAM19A2Q8N3H0 131 aa1.99□□□□□ -2.09
PDLIM5-218ENST00000513341 STOML3Q8TAV4 291 aa1.99□□□□□ -2.09
PDLIM5-218ENST00000513341 MRAP2Q96G30 205 aa1.99□□□□□ -2.09
PDLIM5-218ENST00000513341 ANAPC11Q9NYG5 84 aa1.99□□□□□ -2.09
PDLIM5-218ENST00000513341 NDUFA12Q9UI09 145 aa1.99□□□□□ -2.09
PDLIM5-218ENST00000513341 C22orf24Q9Y442 160 aa1.99□□□□□ -2.09
PDLIM5-218ENST00000513341 TRBV6-5A0A0K0K1A5 114 aa1.98□□□□□ -2.09
PDLIM5-218ENST00000513341 SDHAF1A6NFY7 115 aa1.98□□□□□ -2.09
PDLIM5-218ENST00000513341 PPP1R2P9O14990 202 aa1.98□□□□□ -2.09
PDLIM5-218ENST00000513341 PPBPP02775 128 aa1.98□□□□□ -2.09
PDLIM5-218ENST00000513341 SCGB1A1P11684 91 aa1.98□□□□□ -2.09
PDLIM5-218ENST00000513341 RPS29P62273 56 aaKnown RBP1.98□□□□□ -2.09
PDLIM5-218ENST00000513341 UNQ6190/PRO20217Q6UXQ8 127 aa1.98□□□□□ -2.09
PDLIM5-218ENST00000513341 C5orf38Q86SI9 138 aa1.98□□□□□ -2.09
PDLIM5-218ENST00000513341 BAGE2Q86Y30 109 aa1.98□□□□□ -2.09
PDLIM5-218ENST00000513341 C9orf62Q8N4C0 152 aa1.98□□□□□ -2.09
PDLIM5-218ENST00000513341 GATD1Q8NB37 220 aa1.98□□□□□ -2.09
PDLIM5-218ENST00000513341 MARVELD1Q9BSK0 173 aa1.98□□□□□ -2.09
PDLIM5-218ENST00000513341 LCE3DQ9BYE3 92 aa1.98□□□□□ -2.09
PDLIM5-218ENST00000513341 SPANXB1Q9NS25 103 aaPredicted RBP1.98□□□□□ -2.09
PDLIM5-218ENST00000513341 C6orf48Q9UBA6 75 aa1.98□□□□□ -2.09
PDLIM5-218ENST00000513341 UBE2D4Q9Y2X8 147 aa1.98□□□□□ -2.09
PDLIM5-218ENST00000513341 FLGP20930 4061 aaPredicted RBP1.98□□□□□ -2.09
PDLIM5-218ENST00000513341 IGHV3OR16-9A0A0B4J2B5 98 aa1.97□□□□□ -2.09
PDLIM5-218ENST00000513341 CTXND1A0A1B0GTU2 59 aa1.97□□□□□ -2.09
PDLIM5-218ENST00000513341 INMT-MINDY4F8WBC2 141 aa1.97□□□□□ -2.09
PDLIM5-218ENST00000513341 SSNA1O43805 119 aa1.97□□□□□ -2.09
PDLIM5-218ENST00000513341 MPC2O95563 127 aa1.97□□□□□ -2.09
PDLIM5-218ENST00000513341 IFNA1P01562 189 aa1.97□□□□□ -2.09
PDLIM5-218ENST00000513341 IFITM3Q01628 133 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms