RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-238ENST00000512107 TSPEAR-AS2P59090 65 aa9.34□□□□□ -0.91
MATR3-238ENST00000512107 HAMPP81172 84 aa9.34□□□□□ -0.91
MATR3-238ENST00000512107 SYCNQ0VAF6 134 aa9.34□□□□□ -0.91
MATR3-238ENST00000512107 SDIM1Q6ZPB5 146 aa9.34□□□□□ -0.91
MATR3-238ENST00000512107 C2orf48Q96LS8 159 aa9.34□□□□□ -0.91
MATR3-238ENST00000512107 IGKCP01834 107 aa9.33□□□□□ -0.92
MATR3-238ENST00000512107 S100A2P29034 98 aa9.33□□□□□ -0.92
MATR3-238ENST00000512107 C9orf116Q5BN46 136 aaPredicted RBP9.33□□□□□ -0.92
MATR3-238ENST00000512107 CDPF1Q6NVV7 123 aa9.33□□□□□ -0.92
MATR3-238ENST00000512107 Q8IZM0 81 aa9.33□□□□□ -0.92
MATR3-238ENST00000512107 COX7B2Q8TF08 81 aa9.33□□□□□ -0.92
MATR3-238ENST00000512107 CARD19Q96LW7 228 aa9.33□□□□□ -0.92
MATR3-238ENST00000512107 CAMK2N2Q96S95 79 aa9.33□□□□□ -0.92
MATR3-238ENST00000512107 CHTF8P0CG12 524 aa9.32□□□□□ -0.92
MATR3-238ENST00000512107 ATOH7Q8N100 152 aa9.32□□□□□ -0.92
MATR3-238ENST00000512107 H3BRM9 83 aa9.31□□□□□ -0.92
MATR3-238ENST00000512107 STPG4Q8N801 248 aa9.31□□□□□ -0.92
MATR3-238ENST00000512107 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.31□□□□□ -0.92
MATR3-238ENST00000512107 KIAA1109Q2LD37 5005 aa9.31□□□□□ -0.92
MATR3-238ENST00000512107 PLNP26678 52 aa9.3□□□□□ -0.92
MATR3-238ENST00000512107 MAJINQ3KP22 176 aa9.3□□□□□ -0.92
MATR3-238ENST00000512107 NDUFA1O15239 70 aa9.29□□□□□ -0.92
MATR3-238ENST00000512107 C6orf226Q5I0X4 101 aa9.29□□□□□ -0.92
MATR3-238ENST00000512107 Q6ZSA8 131 aa9.29□□□□□ -0.92
MATR3-238ENST00000512107 A0A096LNI7 61 aa9.28□□□□□ -0.92
MATR3-238ENST00000512107 IGKV2D-26A0A0A0MRZ7 120 aa9.28□□□□□ -0.92
MATR3-238ENST00000512107 PRSS2P07478 247 aa9.28□□□□□ -0.92
MATR3-238ENST00000512107 XGP55808 180 aa9.28□□□□□ -0.92
MATR3-238ENST00000512107 ANKRD39Q53RE8 183 aa9.28□□□□□ -0.92
MATR3-238ENST00000512107 ZNF625Q96I27 306 aaPredicted RBP9.28□□□□□ -0.92
MATR3-238ENST00000512107 HSPG2P98160 4391 aa9.28□□□□□ -0.92
MATR3-238ENST00000512107 TTTY13Q9BZ97 58 aa9.27□□□□□ -0.93
MATR3-238ENST00000512107 LEPROTO15243 131 aa9.26□□□□□ -0.93
MATR3-238ENST00000512107 RNF151Q2KHN1 245 aa9.26□□□□□ -0.93
MATR3-238ENST00000512107 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.25□□□□□ -0.93
MATR3-238ENST00000512107 F8WDY8 70 aa9.25□□□□□ -0.93
MATR3-238ENST00000512107 CKS1BP61024 79 aa9.25□□□□□ -0.93
MATR3-238ENST00000512107 Q6ZRP5 223 aa9.25□□□□□ -0.93
MATR3-238ENST00000512107 IGKV2-24A0A0C4DH68 120 aa9.24□□□□□ -0.93
MATR3-238ENST00000512107 E9PLD3 99 aa9.24□□□□□ -0.93
MATR3-238ENST00000512107 CIRBPQ14011 172 aaKnown RBP9.24□□□□□ -0.93
MATR3-238ENST00000512107 TRBV30A0A0K0K1B3 111 aa9.23□□□□□ -0.93
MATR3-238ENST00000512107 GAGE2BQ13066 116 aa9.23□□□□□ -0.93
MATR3-238ENST00000512107 KRTAP7-1Q8IUC3 87 aa9.23□□□□□ -0.93
MATR3-238ENST00000512107 SPACA4Q8TDM5 124 aa9.23□□□□□ -0.93
MATR3-238ENST00000512107 LOC107984640A0A0U1RRK4 108 aa9.22□□□□□ -0.93
MATR3-238ENST00000512107 J3QQQ9 107 aa9.22□□□□□ -0.93
MATR3-238ENST00000512107 TLX1NBP0CAT3 122 aa9.22□□□□□ -0.93
MATR3-238ENST00000512107 PTTG1IPP53801 180 aa9.22□□□□□ -0.93
MATR3-238ENST00000512107 A0A1W2PNN7 141 aa9.21□□□□□ -0.94
MATR3-238ENST00000512107 FAM168BA1KXE4 195 aa9.21□□□□□ -0.94
MATR3-238ENST00000512107 C20orf202A1L168 122 aa9.21□□□□□ -0.94
MATR3-238ENST00000512107 CXCL5P42830 114 aa9.21□□□□□ -0.94
MATR3-238ENST00000512107 RPL18AQ02543 176 aaKnown RBP9.21□□□□□ -0.94
MATR3-238ENST00000512107 C9orf129Q5T035 196 aaKnown RBP9.21□□□□□ -0.94
MATR3-238ENST00000512107 SCXQ7RTU7 201 aa9.21□□□□□ -0.94
MATR3-238ENST00000512107 CIRBP-AS1Q8TBR5 109 aa9.21□□□□□ -0.94
MATR3-238ENST00000512107 PLEKHB2Q96CS7 222 aa9.21□□□□□ -0.94
MATR3-238ENST00000512107 SCGB1D1O95968 90 aa9.2□□□□□ -0.94
MATR3-238ENST00000512107 GAGE2EQ4V326 116 aa9.2□□□□□ -0.94
MATR3-238ENST00000512107 GAGE2DQ9UEU5 116 aa9.2□□□□□ -0.94
MATR3-238ENST00000512107 TP73-AS1Q9UF72 201 aa9.2□□□□□ -0.94
MATR3-238ENST00000512107 NDUFA12Q9UI09 145 aa9.2□□□□□ -0.94
MATR3-238ENST00000512107 A0A0U1RRA0 63 aa9.19□□□□□ -0.94
MATR3-238ENST00000512107 PFN2P35080 140 aa9.19□□□□□ -0.94
MATR3-238ENST00000512107 HERVK_113P61574 105 aa9.19□□□□□ -0.94
MATR3-238ENST00000512107 JOSD1Q15040 202 aaPredicted RBP9.19□□□□□ -0.94
MATR3-238ENST00000512107 PYY3Q5JQD4 70 aa9.19□□□□□ -0.94
MATR3-238ENST00000512107 ERG28Q9UKR5 140 aa9.19□□□□□ -0.94
MATR3-238ENST00000512107 A0A087WYN8 130 aa9.18□□□□□ -0.94
MATR3-238ENST00000512107 NDUFC2-KCTD14E9PQ53 114 aa9.18□□□□□ -0.94
MATR3-238ENST00000512107 PCP2Q8IVA1 136 aa9.18□□□□□ -0.94
MATR3-238ENST00000512107 Q8NDZ9 215 aa9.18□□□□□ -0.94
MATR3-238ENST00000512107 SMIM13P0DJ93 91 aa9.17□□□□□ -0.94
MATR3-238ENST00000512107 XAGE1AQ9HD64 81 aa9.17□□□□□ -0.94
MATR3-238ENST00000512107 FAT1Q14517 4588 aa9.17□□□□□ -0.94
MATR3-238ENST00000512107 EPM2AB3EWF7 344 aa9.16□□□□□ -0.94
MATR3-238ENST00000512107 CDK2AP2O75956 126 aa9.16□□□□□ -0.94
MATR3-238ENST00000512107 SMR3BP02814 79 aaPredicted RBP9.16□□□□□ -0.94
MATR3-238ENST00000512107 LGALS3P17931 250 aaKnown RBP9.16□□□□□ -0.94
MATR3-238ENST00000512107 A0A0J9YXY3 114 aa9.15□□□□□ -0.94
MATR3-238ENST00000512107 EIF4EBP3O60516 100 aaPredicted RBP9.15□□□□□ -0.94
MATR3-238ENST00000512107 ADAMTSL4-AS1Q5T5F5 129 aa9.15□□□□□ -0.94
MATR3-238ENST00000512107 SERTAD4-AS1Q5TG53 156 aa9.15□□□□□ -0.94
MATR3-238ENST00000512107 PLAC8Q9NZF1 115 aa9.15□□□□□ -0.94
MATR3-238ENST00000512107 MYMXA0A1B0GTQ4 84 aa9.14□□□□□ -0.95
MATR3-238ENST00000512107 LOC105371267A0A1B0GV96 52 aa9.14□□□□□ -0.95
MATR3-238ENST00000512107 NMUP48645 174 aa9.14□□□□□ -0.95
MATR3-238ENST00000512107 DAND5Q8N907 189 aa9.14□□□□□ -0.95
MATR3-238ENST00000512107 LITAFQ99732 161 aa9.14□□□□□ -0.95
MATR3-238ENST00000512107 KRTAP11-1Q8IUC1 163 aa9.13□□□□□ -0.95
MATR3-238ENST00000512107 SND1-IT1Q9HBX3 110 aa9.13□□□□□ -0.95
MATR3-238ENST00000512107 ZNF815PA8K554 130 aa9.12□□□□□ -0.95
MATR3-238ENST00000512107 LINC00158P58513 81 aa9.12□□□□□ -0.95
MATR3-238ENST00000512107 HERV-K104P63124 156 aa9.12□□□□□ -0.95
MATR3-238ENST00000512107 KRTAP4-5Q9BYR2 181 aa9.12□□□□□ -0.95
MATR3-238ENST00000512107 VPS13BQ7Z7G8 4022 aa9.11□□□□□ -0.95
MATR3-238ENST00000512107 AKR1D1P51857 326 aa9.11□□□□□ -0.95
MATR3-238ENST00000512107 MEIG1Q5JSS6 88 aa9.11□□□□□ -0.95
MATR3-238ENST00000512107 SOSTDC1Q6X4U4 206 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms