RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 IGLV5-45A0A087WSX0 123 aa8.44□□□□□ -1.06
SNF8-206ENST00000509989 TINCRA0A1B0GVN0 87 aa8.44□□□□□ -1.06
SNF8-206ENST00000509989 COLCA2A8K830 154 aa8.44□□□□□ -1.06
SNF8-206ENST00000509989 HBDP02042 147 aa8.44□□□□□ -1.06
SNF8-206ENST00000509989 SPINK8P0C7L1 97 aa8.44□□□□□ -1.06
SNF8-206ENST00000509989 NDUFA6P56556 154 aa8.44□□□□□ -1.06
SNF8-206ENST00000509989 GAGE2EQ4V326 116 aa8.44□□□□□ -1.06
SNF8-206ENST00000509989 PAPPA-AS1Q5QFB9 102 aa8.44□□□□□ -1.06
SNF8-206ENST00000509989 PHF5AQ7RTV0 110 aaKnown RBP8.44□□□□□ -1.06
SNF8-206ENST00000509989 GAGE2DQ9UEU5 116 aa8.44□□□□□ -1.06
SNF8-206ENST00000509989 FAM19A2Q8N3H0 131 aa8.43□□□□□ -1.06
SNF8-206ENST00000509989 F8WDY8 70 aa8.42□□□□□ -1.06
SNF8-206ENST00000509989 NUPR1O60356 82 aa8.42□□□□□ -1.06
SNF8-206ENST00000509989 TLX1NBP0CAT3 122 aa8.42□□□□□ -1.06
SNF8-206ENST00000509989 PRR3P79522 188 aaKnown RBP8.42□□□□□ -1.06
SNF8-206ENST00000509989 C9orf129Q5T035 196 aaKnown RBP8.42□□□□□ -1.06
SNF8-206ENST00000509989 Q8IZM0 81 aa8.42□□□□□ -1.06
SNF8-206ENST00000509989 IGLC3P0DOY3 106 aa8.41□□□□□ -1.06
SNF8-206ENST00000509989 ZNF22P17026 224 aaPredicted RBP8.41□□□□□ -1.06
SNF8-206ENST00000509989 C6orf226Q5I0X4 101 aa8.41□□□□□ -1.06
SNF8-206ENST00000509989 LINC00474Q9P2X8 69 aa8.41□□□□□ -1.06
SNF8-206ENST00000509989 TRBV30A0A0K0K1B3 111 aa8.4□□□□□ -1.06
SNF8-206ENST00000509989 C11orf86A6NJI1 115 aa8.4□□□□□ -1.06
SNF8-206ENST00000509989 PRSS2P07478 247 aa8.4□□□□□ -1.06
SNF8-206ENST00000509989 SEC11AP67812 179 aa8.4□□□□□ -1.06
SNF8-206ENST00000509989 FAM19A5Q7Z5A7 132 aaPredicted RBP8.4□□□□□ -1.06
SNF8-206ENST00000509989 C7orf33Q8WU49 177 aa8.4□□□□□ -1.06
SNF8-206ENST00000509989 PACRGQ96M98 296 aaPredicted RBP8.4□□□□□ -1.06
SNF8-206ENST00000509989 LINC01549A6NIU2 74 aa8.39□□□□□ -1.07
SNF8-206ENST00000509989 KRTAP29-1A8MX34 341 aaPredicted RBP8.39□□□□□ -1.07
SNF8-206ENST00000509989 RAB5BP61020 215 aa8.39□□□□□ -1.07
SNF8-206ENST00000509989 BAGE3Q86Y29 109 aa8.39□□□□□ -1.07
SNF8-206ENST00000509989 COX7B2Q8TF08 81 aa8.39□□□□□ -1.07
SNF8-206ENST00000509989 SERF1AO75920 110 aa8.38□□□□□ -1.07
SNF8-206ENST00000509989 CKS1BP61024 79 aa8.38□□□□□ -1.07
SNF8-206ENST00000509989 SERTAD4-AS1Q5TG53 156 aa8.38□□□□□ -1.07
SNF8-206ENST00000509989 CHCHD1Q96BP2 118 aaKnown RBP8.38□□□□□ -1.07
SNF8-206ENST00000509989 XAGE1AQ9HD64 81 aa8.38□□□□□ -1.07
SNF8-206ENST00000509989 PKIGQ9Y2B9 76 aa8.38□□□□□ -1.07
SNF8-206ENST00000509989 NDUFC2-KCTD14E9PQ53 114 aa8.37□□□□□ -1.07
SNF8-206ENST00000509989 IGLV5-39A0A0G2JS06 123 aa8.36□□□□□ -1.07
SNF8-206ENST00000509989 F8VRH5 84 aa8.36□□□□□ -1.07
SNF8-206ENST00000509989 J3QL48 77 aa8.36□□□□□ -1.07
SNF8-206ENST00000509989 ATP5LO75964 103 aa8.36□□□□□ -1.07
SNF8-206ENST00000509989 PSORS1C2Q9UIG4 136 aa8.36□□□□□ -1.07
SNF8-206ENST00000509989 TNXBP22105 4242 aa8.36□□□□□ -1.07
SNF8-206ENST00000509989 MT1HL1P0DM35 61 aa8.35□□□□□ -1.07
SNF8-206ENST00000509989 ODF1Q14990 250 aa8.35□□□□□ -1.07
SNF8-206ENST00000509989 IFI27L1Q96BM0 104 aa8.35□□□□□ -1.07
SNF8-206ENST00000509989 CHTOPQ9Y3Y2 248 aaKnown RBP8.35□□□□□ -1.07
SNF8-206ENST00000509989 HSBP1O75506 76 aa8.34□□□□□ -1.07
SNF8-206ENST00000509989 SRSF9Q13242 221 aaKnown RBP eCLIP8.34□□□□□ -1.07
SNF8-206ENST00000509989 S100A1P23297 94 aa8.33□□□□□ -1.08
SNF8-206ENST00000509989 TMEM170BQ5T4T1 132 aa8.33□□□□□ -1.08
SNF8-206ENST00000509989 H0Y8G0 127 aa8.32□□□□□ -1.08
SNF8-206ENST00000509989 H3BRM9 83 aa8.32□□□□□ -1.08
SNF8-206ENST00000509989 M0QXV9 152 aa8.32□□□□□ -1.08
SNF8-206ENST00000509989 ZNF625Q96I27 306 aaPredicted RBP8.32□□□□□ -1.08
SNF8-206ENST00000509989 OXTP01178 125 aa8.31□□□□□ -1.08
SNF8-206ENST00000509989 FABP4P15090 132 aa8.31□□□□□ -1.08
SNF8-206ENST00000509989 TRAV12-1A0A0B4J245 112 aa8.3□□□□□ -1.08
SNF8-206ENST00000509989 TMEM223A0PJW6 202 aa8.3□□□□□ -1.08
SNF8-206ENST00000509989 CXCL5P42830 114 aa8.3□□□□□ -1.08
SNF8-206ENST00000509989 C1orf137Q5JT78 98 aa8.3□□□□□ -1.08
SNF8-206ENST00000509989 HIST1H2BKO60814 126 aa8.29□□□□□ -1.08
SNF8-206ENST00000509989 HIST1H2BJP06899 126 aa8.29□□□□□ -1.08
SNF8-206ENST00000509989 HIST1H2BOP23527 126 aa8.29□□□□□ -1.08
SNF8-206ENST00000509989 HIST1H2BBP33778 126 aa8.29□□□□□ -1.08
SNF8-206ENST00000509989 PFN2P35080 140 aa8.29□□□□□ -1.08
SNF8-206ENST00000509989 HIST1H2BDP58876 126 aa8.29□□□□□ -1.08
SNF8-206ENST00000509989 HIST1H2BCP62807 126 aa8.29□□□□□ -1.08
SNF8-206ENST00000509989 HIST2H2BEQ16778 126 aa8.29□□□□□ -1.08
SNF8-206ENST00000509989 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.29□□□□□ -1.08
SNF8-206ENST00000509989 Q8NDZ9 215 aa8.29□□□□□ -1.08
SNF8-206ENST00000509989 HIST1H2BHQ93079 126 aa8.29□□□□□ -1.08
SNF8-206ENST00000509989 HIST1H2BNQ99877 126 aa8.29□□□□□ -1.08
SNF8-206ENST00000509989 HIST1H2BMQ99879 126 aa8.29□□□□□ -1.08
SNF8-206ENST00000509989 PMCHL2Q9BQD1 86 aa8.29□□□□□ -1.08
SNF8-206ENST00000509989 C22orf24Q9Y442 160 aa8.29□□□□□ -1.08
SNF8-206ENST00000509989 LEPROTL1O95214 131 aa8.28□□□□□ -1.08
SNF8-206ENST00000509989 HMCN2Q8NDA2 5059 aa8.27□□□□□ -1.09
SNF8-206ENST00000509989 IGLV7-43P04211 117 aa8.26□□□□□ -1.09
SNF8-206ENST00000509989 TSPEAR-AS2P59090 65 aa8.26□□□□□ -1.09
SNF8-206ENST00000509989 SPINK6Q6UWN8 80 aa8.26□□□□□ -1.09
SNF8-206ENST00000509989 ERG28Q9UKR5 140 aa8.26□□□□□ -1.09
SNF8-206ENST00000509989 A0A0U1RRA0 63 aa8.25□□□□□ -1.09
SNF8-206ENST00000509989 GAGE10A6NGK3 116 aa8.25□□□□□ -1.09
SNF8-206ENST00000509989 ATP6V1G1O75348 118 aa8.25□□□□□ -1.09
SNF8-206ENST00000509989 UBE2BP63146 152 aa8.25□□□□□ -1.09
SNF8-206ENST00000509989 RPL37AP8A6NKH3 93 aa8.24□□□□□ -1.09
SNF8-206ENST00000509989 LINC00167Q96N53 147 aa8.24□□□□□ -1.09
SNF8-206ENST00000509989 LINC01600Q96MT4 127 aa8.23□□□□□ -1.09
SNF8-206ENST00000509989 SND1-IT1Q9HBX3 110 aa8.23□□□□□ -1.09
SNF8-206ENST00000509989 MRPL55Q7Z7F7 128 aaKnown RBP8.22□□□□□ -1.09
SNF8-206ENST00000509989 VPREB1P12018 145 aa8.21□□□□□ -1.1
SNF8-206ENST00000509989 KRTAP10-8P60410 259 aa8.21□□□□□ -1.1
SNF8-206ENST00000509989 PLA2G2DQ9UNK4 145 aa8.21□□□□□ -1.1
SNF8-206ENST00000509989 IGLV5-37A0A075B6J1 123 aa8.2□□□□□ -1.1
SNF8-206ENST00000509989 SMIM13P0DJ93 91 aa8.2□□□□□ -1.1
SNF8-206ENST00000509989 HSPB8Q9UJY1 196 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms