RNA–Protein interactions for RNA: ENST00000509511.5

FGFR4-211, Transcript of fibroblast growth factor receptor 4, humanhuman

TSL 1 (best)

Gene FGFR4, Length 1,341 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-211ENST00000509511 SERF1AO75920 110 aa12.48□□□□□ -0.41
FGFR4-211ENST00000509511 CKS1BP61024 79 aa12.48□□□□□ -0.41
FGFR4-211ENST00000509511 C10orf25Q5T742 122 aa12.48□□□□□ -0.41
FGFR4-211ENST00000509511 UNQ6190/PRO20217Q6UXQ8 127 aa12.48□□□□□ -0.41
FGFR4-211ENST00000509511 C6orf48Q9UBA6 75 aa12.48□□□□□ -0.41
FGFR4-211ENST00000509511 C6orf226Q5I0X4 101 aa12.47□□□□□ -0.41
FGFR4-211ENST00000509511 C2orf82Q6UX34 121 aa12.47□□□□□ -0.41
FGFR4-211ENST00000509511 STPG4Q8N801 248 aa12.47□□□□□ -0.41
FGFR4-211ENST00000509511 FAM19A2Q8N3H0 131 aa12.46□□□□□ -0.41
FGFR4-211ENST00000509511 IFI27L1Q96BM0 104 aa12.46□□□□□ -0.41
FGFR4-211ENST00000509511 CXCL5P42830 114 aa12.45□□□□□ -0.42
FGFR4-211ENST00000509511 SPINK8P0C7L1 97 aa12.44□□□□□ -0.42
FGFR4-211ENST00000509511 TLX1NBP0CAT3 122 aa12.44□□□□□ -0.42
FGFR4-211ENST00000509511 LINC00310P59036 64 aa12.44□□□□□ -0.42
FGFR4-211ENST00000509511 SRRM2Q9UQ35 2752 aaKnown RBP12.44□□□□□ -0.42
FGFR4-211ENST00000509511 RPL37AP61513 92 aaKnown RBP12.43□□□□□ -0.42
FGFR4-211ENST00000509511 C7orf33Q8WU49 177 aa12.43□□□□□ -0.42
FGFR4-211ENST00000509511 CHTOPQ9Y3Y2 248 aaKnown RBP12.43□□□□□ -0.42
FGFR4-211ENST00000509511 TRAV12-1A0A0B4J245 112 aa12.42□□□□□ -0.42
FGFR4-211ENST00000509511 F8VRH5 84 aa12.42□□□□□ -0.42
FGFR4-211ENST00000509511 INAFM2P0DMQ5 153 aa12.42□□□□□ -0.42
FGFR4-211ENST00000509511 ZNF22P17026 224 aaPredicted RBP12.42□□□□□ -0.42
FGFR4-211ENST00000509511 COX7B2Q8TF08 81 aa12.42□□□□□ -0.42
FGFR4-211ENST00000509511 LEPROTL1O95214 131 aa12.41□□□□□ -0.42
FGFR4-211ENST00000509511 C11orf86A6NJI1 115 aa12.4□□□□□ -0.42
FGFR4-211ENST00000509511 NDUFC2-KCTD14E9PQ53 114 aa12.4□□□□□ -0.42
FGFR4-211ENST00000509511 Q6ZRP5 223 aa12.4□□□□□ -0.42
FGFR4-211ENST00000509511 HIST1H2BKO60814 126 aa12.39□□□□□ -0.43
FGFR4-211ENST00000509511 HIST1H2BJP06899 126 aa12.39□□□□□ -0.43
FGFR4-211ENST00000509511 HIST1H2BOP23527 126 aa12.39□□□□□ -0.43
FGFR4-211ENST00000509511 HIST1H2BBP33778 126 aa12.39□□□□□ -0.43
FGFR4-211ENST00000509511 HIST1H2BDP58876 126 aa12.39□□□□□ -0.43
FGFR4-211ENST00000509511 HIST1H2BCP62807 126 aa12.39□□□□□ -0.43
FGFR4-211ENST00000509511 HIST2H2BEQ16778 126 aa12.39□□□□□ -0.43
FGFR4-211ENST00000509511 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.39□□□□□ -0.43
FGFR4-211ENST00000509511 TMEM170BQ5T4T1 132 aa12.39□□□□□ -0.43
FGFR4-211ENST00000509511 HIST1H2BHQ93079 126 aa12.39□□□□□ -0.43
FGFR4-211ENST00000509511 HIST1H2BNQ99877 126 aa12.39□□□□□ -0.43
FGFR4-211ENST00000509511 HIST1H2BMQ99879 126 aa12.39□□□□□ -0.43
FGFR4-211ENST00000509511 HSPB8Q9UJY1 196 aa12.39□□□□□ -0.43
FGFR4-211ENST00000509511 GAGE2EQ4V326 116 aa12.38□□□□□ -0.43
FGFR4-211ENST00000509511 GAGE2DQ9UEU5 116 aa12.38□□□□□ -0.43
FGFR4-211ENST00000509511 IGLV5-39A0A0G2JS06 123 aa12.37□□□□□ -0.43
FGFR4-211ENST00000509511 C9orf116Q5BN46 136 aaPredicted RBP12.37□□□□□ -0.43
FGFR4-211ENST00000509511 H0Y8G0 127 aa12.37□□□□□ -0.43
FGFR4-211ENST00000509511 KRTAP10-4P60372 401 aaPredicted RBP12.37□□□□□ -0.43
FGFR4-211ENST00000509511 NUPR1O60356 82 aa12.36□□□□□ -0.43
FGFR4-211ENST00000509511 FABP4P15090 132 aa12.34□□□□□ -0.43
FGFR4-211ENST00000509511 A0A1W2PNN7 141 aa12.33□□□□□ -0.44
FGFR4-211ENST00000509511 ODF1Q14990 250 aa12.33□□□□□ -0.44
FGFR4-211ENST00000509511 SFTA2Q6UW10 78 aa12.32□□□□□ -0.44
FGFR4-211ENST00000509511 PLNP26678 52 aa12.31□□□□□ -0.44
FGFR4-211ENST00000509511 FAM19A5Q7Z5A7 132 aaPredicted RBP12.31□□□□□ -0.44
FGFR4-211ENST00000509511 MYCBP2O75592 4640 aa12.3□□□□□ -0.44
FGFR4-211ENST00000509511 TMEM223A0PJW6 202 aa12.3□□□□□ -0.44
FGFR4-211ENST00000509511 FAM168BA1KXE4 195 aa12.3□□□□□ -0.44
FGFR4-211ENST00000509511 PRR3P79522 188 aaKnown RBP12.3□□□□□ -0.44
FGFR4-211ENST00000509511 MAP1LC3CQ9BXW4 147 aa12.3□□□□□ -0.44
FGFR4-211ENST00000509511 C9orf129Q5T035 196 aaKnown RBP12.29□□□□□ -0.44
FGFR4-211ENST00000509511 XAGE1AQ9HD64 81 aa12.28□□□□□ -0.44
FGFR4-211ENST00000509511 M0QXV9 152 aa12.27□□□□□ -0.45
FGFR4-211ENST00000509511 DPM2O94777 84 aa12.26□□□□□ -0.45
FGFR4-211ENST00000509511 PHF5AQ7RTV0 110 aaKnown RBP12.26□□□□□ -0.45
FGFR4-211ENST00000509511 COA6Q5JTJ3 125 aaKnown RBP12.25□□□□□ -0.45
FGFR4-211ENST00000509511 FLG2Q5D862 2391 aaPredicted RBP12.24□□□□□ -0.45
FGFR4-211ENST00000509511 ZNF625Q96I27 306 aaPredicted RBP12.24□□□□□ -0.45
FGFR4-211ENST00000509511 ERG28Q9UKR5 140 aa12.24□□□□□ -0.45
FGFR4-211ENST00000509511 IGKCP01834 107 aa12.23□□□□□ -0.45
FGFR4-211ENST00000509511 PFN2P35080 140 aa12.23□□□□□ -0.45
FGFR4-211ENST00000509511 HNRNPA3P51991 378 aaKnown RBP12.23□□□□□ -0.45
FGFR4-211ENST00000509511 HERVK_113P61574 105 aa12.22□□□□□ -0.45
FGFR4-211ENST00000509511 COX17Q14061 63 aa12.22□□□□□ -0.45
FGFR4-211ENST00000509511 PMCHL2Q9BQD1 86 aa12.22□□□□□ -0.45
FGFR4-211ENST00000509511 PKHD1L1Q86WI1 4243 aa12.22□□□□□ -0.45
FGFR4-211ENST00000509511 KRTAP7-1Q8IUC3 87 aa12.21□□□□□ -0.45
FGFR4-211ENST00000509511 SYS1-DBNDD2H3BUS1 97 aa12.2□□□□□ -0.46
FGFR4-211ENST00000509511 UBE2BP63146 152 aa12.2□□□□□ -0.46
FGFR4-211ENST00000509511 SERTAD4-AS1Q5TG53 156 aa12.2□□□□□ -0.46
FGFR4-211ENST00000509511 PSORS1C2Q9UIG4 136 aa12.19□□□□□ -0.46
FGFR4-211ENST00000509511 PLEKHB2Q96CS7 222 aa12.18□□□□□ -0.46
FGFR4-211ENST00000509511 NDUFA12Q9UI09 145 aa12.17□□□□□ -0.46
FGFR4-211ENST00000509511 LEPROTO15243 131 aa12.16□□□□□ -0.46
FGFR4-211ENST00000509511 HERV-K104P63124 156 aa12.16□□□□□ -0.46
FGFR4-211ENST00000509511 LBHQ53QV2 105 aaPredicted RBP12.16□□□□□ -0.46
FGFR4-211ENST00000509511 PET117Q6UWS5 81 aa12.16□□□□□ -0.46
FGFR4-211ENST00000509511 TP73-AS1Q9UF72 201 aa12.16□□□□□ -0.46
FGFR4-211ENST00000509511 C22orf24Q9Y442 160 aa12.16□□□□□ -0.46
FGFR4-211ENST00000509511 MEIG1Q5JSS6 88 aa12.15□□□□□ -0.46
FGFR4-211ENST00000509511 C1orf137Q5JT78 98 aa12.15□□□□□ -0.46
FGFR4-211ENST00000509511 SND1-IT1Q9HBX3 110 aa12.15□□□□□ -0.46
FGFR4-211ENST00000509511 PLA2G2DQ9UNK4 145 aa12.15□□□□□ -0.46
FGFR4-211ENST00000509511 MYMXA0A1B0GTQ4 84 aa12.14□□□□□ -0.47
FGFR4-211ENST00000509511 LINC01545Q5VT33 79 aa12.14□□□□□ -0.47
FGFR4-211ENST00000509511 MRPL55Q7Z7F7 128 aaKnown RBP12.14□□□□□ -0.47
FGFR4-211ENST00000509511 NKAPP1Q8N9T2 125 aa12.14□□□□□ -0.47
FGFR4-211ENST00000509511 DMBT1Q9UGM3 2413 aaPredicted RBP12.14□□□□□ -0.47
FGFR4-211ENST00000509511 KRTAP29-1A8MX34 341 aaPredicted RBP12.13□□□□□ -0.47
FGFR4-211ENST00000509511 J3QL48 77 aa12.13□□□□□ -0.47
FGFR4-211ENST00000509511 J3QQQ9 107 aa12.13□□□□□ -0.47
FGFR4-211ENST00000509511 LGALS3P17931 250 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 267.4 ms