RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 TRBV30A0A0K0K1B3 111 aa10.04□□□□□ -0.8
PDLIM5-212ENST00000509333 RPL18AQ02543 176 aaKnown RBP10.04□□□□□ -0.8
PDLIM5-212ENST00000509333 PMVKQ15126 192 aa10.04□□□□□ -0.8
PDLIM5-212ENST00000509333 C6orf226Q5I0X4 101 aa10.04□□□□□ -0.8
PDLIM5-212ENST00000509333 SLC7A5P1Q8MH63 180 aa10.04□□□□□ -0.8
PDLIM5-212ENST00000509333 TINCRA0A1B0GVN0 87 aa10.03□□□□□ -0.8
PDLIM5-212ENST00000509333 PRR3P79522 188 aaKnown RBP10.02□□□□□ -0.81
PDLIM5-212ENST00000509333 Q8IZM0 81 aa10.02□□□□□ -0.81
PDLIM5-212ENST00000509333 TOMM7Q9P0U1 55 aa10.02□□□□□ -0.81
PDLIM5-212ENST00000509333 IGLV5-45A0A087WSX0 123 aa10.01□□□□□ -0.81
PDLIM5-212ENST00000509333 PRSS2P07478 247 aa10.01□□□□□ -0.81
PDLIM5-212ENST00000509333 GAGE2EQ4V326 116 aa10.01□□□□□ -0.81
PDLIM5-212ENST00000509333 PACRGQ96M98 296 aaPredicted RBP10.01□□□□□ -0.81
PDLIM5-212ENST00000509333 GAGE2DQ9UEU5 116 aa10.01□□□□□ -0.81
PDLIM5-212ENST00000509333 RAB5BP61020 215 aa10□□□□□ -0.81
PDLIM5-212ENST00000509333 SRSF9Q13242 221 aaKnown RBP eCLIP10□□□□□ -0.81
PDLIM5-212ENST00000509333 PDZD11Q5EBL8 140 aa10□□□□□ -0.81
PDLIM5-212ENST00000509333 FAM168BA1KXE4 195 aa9.99□□□□□ -0.81
PDLIM5-212ENST00000509333 NDUFC2-KCTD14E9PQ53 114 aa9.99□□□□□ -0.81
PDLIM5-212ENST00000509333 CKS1BP61024 79 aa9.99□□□□□ -0.81
PDLIM5-212ENST00000509333 LCE2AQ5TA79 106 aaPredicted RBP9.99□□□□□ -0.81
PDLIM5-212ENST00000509333 PHF5AQ7RTV0 110 aaKnown RBP9.99□□□□□ -0.81
PDLIM5-212ENST00000509333 KRTAP7-1Q8IUC3 87 aa9.99□□□□□ -0.81
PDLIM5-212ENST00000509333 LINC00469Q8N7U9 141 aa9.99□□□□□ -0.81
PDLIM5-212ENST00000509333 SMIM1B2RUZ4 78 aa9.98□□□□□ -0.81
PDLIM5-212ENST00000509333 HBDP02042 147 aa9.98□□□□□ -0.81
PDLIM5-212ENST00000509333 PMCHL1Q16048 86 aa9.98□□□□□ -0.81
PDLIM5-212ENST00000509333 CBLN2Q8IUK8 224 aa9.98□□□□□ -0.81
PDLIM5-212ENST00000509333 NDUFA6P56556 154 aa9.96□□□□□ -0.82
PDLIM5-212ENST00000509333 C9orf129Q5T035 196 aaKnown RBP9.96□□□□□ -0.82
PDLIM5-212ENST00000509333 F8VRH5 84 aa9.95□□□□□ -0.82
PDLIM5-212ENST00000509333 ATP5LO75964 103 aa9.95□□□□□ -0.82
PDLIM5-212ENST00000509333 MT1HL1P0DM35 61 aa9.95□□□□□ -0.82
PDLIM5-212ENST00000509333 IGLC3P0DOY3 106 aa9.95□□□□□ -0.82
PDLIM5-212ENST00000509333 COX7B2Q8TF08 81 aa9.95□□□□□ -0.82
PDLIM5-212ENST00000509333 PSORS1C2Q9UIG4 136 aa9.95□□□□□ -0.82
PDLIM5-212ENST00000509333 SPINK8P0C7L1 97 aa9.94□□□□□ -0.82
PDLIM5-212ENST00000509333 SPINK6Q6UWN8 80 aa9.94□□□□□ -0.82
PDLIM5-212ENST00000509333 KRTAP11-1Q8IUC1 163 aa9.94□□□□□ -0.82
PDLIM5-212ENST00000509333 CHCHD1Q96BP2 118 aaKnown RBP9.94□□□□□ -0.82
PDLIM5-212ENST00000509333 BAGE3Q86Y29 109 aa9.93□□□□□ -0.82
PDLIM5-212ENST00000509333 TRGC2P03986 189 aa9.92□□□□□ -0.82
PDLIM5-212ENST00000509333 CXCL5P42830 114 aa9.92□□□□□ -0.82
PDLIM5-212ENST00000509333 IGLV5-39A0A0G2JS06 123 aa9.91□□□□□ -0.82
PDLIM5-212ENST00000509333 COLCA2A8K830 154 aa9.91□□□□□ -0.82
PDLIM5-212ENST00000509333 H3BRM9 83 aa9.91□□□□□ -0.82
PDLIM5-212ENST00000509333 ZNF22P17026 224 aaPredicted RBP9.91□□□□□ -0.82
PDLIM5-212ENST00000509333 FAM19A5Q7Z5A7 132 aaPredicted RBP9.91□□□□□ -0.82
PDLIM5-212ENST00000509333 LINC01600Q96MT4 127 aa9.9□□□□□ -0.82
PDLIM5-212ENST00000509333 XAGE1AQ9HD64 81 aa9.9□□□□□ -0.82
PDLIM5-212ENST00000509333 C1orf137Q5JT78 98 aa9.89□□□□□ -0.83
PDLIM5-212ENST00000509333 TNXBP22105 4242 aa9.88□□□□□ -0.83
PDLIM5-212ENST00000509333 C11orf86A6NJI1 115 aa9.88□□□□□ -0.83
PDLIM5-212ENST00000509333 SERTAD4-AS1Q5TG53 156 aa9.88□□□□□ -0.83
PDLIM5-212ENST00000509333 FAM19A2Q8N3H0 131 aa9.88□□□□□ -0.83
PDLIM5-212ENST00000509333 C22orf24Q9Y442 160 aa9.88□□□□□ -0.83
PDLIM5-212ENST00000509333 IFI27L1Q96BM0 104 aa9.87□□□□□ -0.83
PDLIM5-212ENST00000509333 CHTOPQ9Y3Y2 248 aaKnown RBP9.87□□□□□ -0.83
PDLIM5-212ENST00000509333 TRAV12-1A0A0B4J245 112 aa9.86□□□□□ -0.83
PDLIM5-212ENST00000509333 M0QXV9 152 aa9.86□□□□□ -0.83
PDLIM5-212ENST00000509333 IGLV7-43P04211 117 aa9.86□□□□□ -0.83
PDLIM5-212ENST00000509333 SMCPP49901 116 aaPredicted RBP9.86□□□□□ -0.83
PDLIM5-212ENST00000509333 KRTAP10-8P60410 259 aa9.86□□□□□ -0.83
PDLIM5-212ENST00000509333 ODF1Q14990 250 aa9.86□□□□□ -0.83
PDLIM5-212ENST00000509333 NUPR1O60356 82 aa9.85□□□□□ -0.83
PDLIM5-212ENST00000509333 HSBP1O75506 76 aa9.85□□□□□ -0.83
PDLIM5-212ENST00000509333 LINC00310P59036 64 aa9.85□□□□□ -0.83
PDLIM5-212ENST00000509333 TMEM170BQ5T4T1 132 aa9.84□□□□□ -0.83
PDLIM5-212ENST00000509333 REG3GQ6UW15 175 aa9.84□□□□□ -0.83
PDLIM5-212ENST00000509333 HMCN2Q8NDA2 5059 aa9.83□□□□□ -0.84
PDLIM5-212ENST00000509333 PLA2G2DQ9UNK4 145 aa9.83□□□□□ -0.84
PDLIM5-212ENST00000509333 SERF1AO75920 110 aa9.82□□□□□ -0.84
PDLIM5-212ENST00000509333 UBE2BP63146 152 aa9.82□□□□□ -0.84
PDLIM5-212ENST00000509333 LBHQ53QV2 105 aaPredicted RBP9.82□□□□□ -0.84
PDLIM5-212ENST00000509333 TMEM223A0PJW6 202 aa9.81□□□□□ -0.84
PDLIM5-212ENST00000509333 LCE2CQ5TA81 110 aa9.81□□□□□ -0.84
PDLIM5-212ENST00000509333 TP73-AS1Q9UF72 201 aa9.81□□□□□ -0.84
PDLIM5-212ENST00000509333 PFN2P35080 140 aa9.8□□□□□ -0.84
PDLIM5-212ENST00000509333 LEPROTL1O95214 131 aa9.79□□□□□ -0.84
PDLIM5-212ENST00000509333 DIRC1Q969H9 104 aa9.79□□□□□ -0.84
PDLIM5-212ENST00000509333 ZNF625Q96I27 306 aaPredicted RBP9.79□□□□□ -0.84
PDLIM5-212ENST00000509333 LINC00167Q96N53 147 aa9.79□□□□□ -0.84
PDLIM5-212ENST00000509333 SCO1O75880 301 aa9.78□□□□□ -0.84
PDLIM5-212ENST00000509333 COX17Q14061 63 aa9.78□□□□□ -0.84
PDLIM5-212ENST00000509333 MRPL55Q7Z7F7 128 aaKnown RBP9.78□□□□□ -0.84
PDLIM5-212ENST00000509333 ERG28Q9UKR5 140 aa9.78□□□□□ -0.84
PDLIM5-212ENST00000509333 IGLV5-37A0A075B6J1 123 aa9.77□□□□□ -0.85
PDLIM5-212ENST00000509333 SFTA2Q6UW10 78 aa9.76□□□□□ -0.85
PDLIM5-212ENST00000509333 SND1-IT1Q9HBX3 110 aa9.76□□□□□ -0.85
PDLIM5-212ENST00000509333 H0Y9J4 135 aa9.75□□□□□ -0.85
PDLIM5-212ENST00000509333 ZNF861PO60384 105 aa9.75□□□□□ -0.85
PDLIM5-212ENST00000509333 FABP4P15090 132 aa9.75□□□□□ -0.85
PDLIM5-212ENST00000509333 RPL37AP8A6NKH3 93 aa9.74□□□□□ -0.85
PDLIM5-212ENST00000509333 HSPB8Q9UJY1 196 aa9.74□□□□□ -0.85
PDLIM5-212ENST00000509333 GAGE10A6NGK3 116 aa9.72□□□□□ -0.85
PDLIM5-212ENST00000509333 H0Y8G0 127 aa9.72□□□□□ -0.85
PDLIM5-212ENST00000509333 HIST1H2BKO60814 126 aa9.72□□□□□ -0.85
PDLIM5-212ENST00000509333 HIST1H2BJP06899 126 aa9.72□□□□□ -0.85
PDLIM5-212ENST00000509333 HIST1H2BOP23527 126 aa9.72□□□□□ -0.85
PDLIM5-212ENST00000509333 HIST1H2BBP33778 126 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms