RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 FAT1Q14517 4588 aa6.71□□□□□ -1.34
POLR2J3-213ENST00000508848 TRAV12-1A0A0B4J245 112 aa6.71□□□□□ -1.34
POLR2J3-213ENST00000508848 IGLC3P0DOY3 106 aa6.71□□□□□ -1.34
POLR2J3-213ENST00000508848 CXCL5P42830 114 aa6.71□□□□□ -1.34
POLR2J3-213ENST00000508848 PTTG1IPP53801 180 aa6.71□□□□□ -1.34
POLR2J3-213ENST00000508848 LINC00528Q8N1L1 170 aa6.71□□□□□ -1.34
POLR2J3-213ENST00000508848 DPH3Q96FX2 82 aa6.71□□□□□ -1.34
POLR2J3-213ENST00000508848 A0A096LNI7 61 aa6.7□□□□□ -1.34
POLR2J3-213ENST00000508848 HSBP1O75506 76 aa6.7□□□□□ -1.34
POLR2J3-213ENST00000508848 PRSS2P07478 247 aa6.7□□□□□ -1.34
POLR2J3-213ENST00000508848 C6orf226Q5I0X4 101 aa6.7□□□□□ -1.34
POLR2J3-213ENST00000508848 UNQ6190/PRO20217Q6UXQ8 127 aa6.7□□□□□ -1.34
POLR2J3-213ENST00000508848 BAGE3Q86Y29 109 aa6.7□□□□□ -1.34
POLR2J3-213ENST00000508848 PACRGQ96M98 296 aaPredicted RBP6.7□□□□□ -1.34
POLR2J3-213ENST00000508848 SMIM1B2RUZ4 78 aa6.69□□□□□ -1.34
POLR2J3-213ENST00000508848 H3BRM9 83 aa6.69□□□□□ -1.34
POLR2J3-213ENST00000508848 KRTAP10-4P60372 401 aaPredicted RBP6.69□□□□□ -1.34
POLR2J3-213ENST00000508848 C6orf48Q9UBA6 75 aa6.69□□□□□ -1.34
POLR2J3-213ENST00000508848 ABCA13Q86UQ4 5058 aa6.69□□□□□ -1.34
POLR2J3-213ENST00000508848 IGLV5-39A0A0G2JS06 123 aa6.68□□□□□ -1.34
POLR2J3-213ENST00000508848 NDUFC2-KCTD14E9PQ53 114 aa6.68□□□□□ -1.34
POLR2J3-213ENST00000508848 F8VRH5 84 aa6.68□□□□□ -1.34
POLR2J3-213ENST00000508848 CHTF8P0CG12 524 aa6.68□□□□□ -1.34
POLR2J3-213ENST00000508848 CKS1BP61024 79 aa6.68□□□□□ -1.34
POLR2J3-213ENST00000508848 HAMPP81172 84 aa6.68□□□□□ -1.34
POLR2J3-213ENST00000508848 MAJINQ3KP22 176 aa6.68□□□□□ -1.34
POLR2J3-213ENST00000508848 C10orf25Q5T742 122 aa6.68□□□□□ -1.34
POLR2J3-213ENST00000508848 SFTA2Q6UW10 78 aa6.68□□□□□ -1.34
POLR2J3-213ENST00000508848 LINC00469Q8N7U9 141 aa6.68□□□□□ -1.34
POLR2J3-213ENST00000508848 STPG4Q8N801 248 aa6.68□□□□□ -1.34
POLR2J3-213ENST00000508848 IFI27L1Q96BM0 104 aa6.68□□□□□ -1.34
POLR2J3-213ENST00000508848 INAFM2P0DMQ5 153 aa6.67□□□□□ -1.34
POLR2J3-213ENST00000508848 PMCHL1Q16048 86 aa6.67□□□□□ -1.34
POLR2J3-213ENST00000508848 FLG2Q5D862 2391 aaPredicted RBP6.67□□□□□ -1.34
POLR2J3-213ENST00000508848 IGKV2-24A0A0C4DH68 120 aa6.66□□□□□ -1.34
POLR2J3-213ENST00000508848 SERF1AO75920 110 aa6.66□□□□□ -1.34
POLR2J3-213ENST00000508848 LINC00310P59036 64 aa6.66□□□□□ -1.34
POLR2J3-213ENST00000508848 Q6ZRP5 223 aa6.66□□□□□ -1.34
POLR2J3-213ENST00000508848 C7orf33Q8WU49 177 aa6.66□□□□□ -1.34
POLR2J3-213ENST00000508848 LEPROTL1O95214 131 aa6.65□□□□□ -1.34
POLR2J3-213ENST00000508848 ZNF22P17026 224 aaPredicted RBP6.65□□□□□ -1.34
POLR2J3-213ENST00000508848 NDUFA6P56556 154 aa6.65□□□□□ -1.34
POLR2J3-213ENST00000508848 RPL37AP61513 92 aaKnown RBP6.65□□□□□ -1.34
POLR2J3-213ENST00000508848 C2orf82Q6UX34 121 aa6.65□□□□□ -1.34
POLR2J3-213ENST00000508848 COX7B2Q8TF08 81 aa6.65□□□□□ -1.34
POLR2J3-213ENST00000508848 HSPB8Q9UJY1 196 aa6.65□□□□□ -1.34
POLR2J3-213ENST00000508848 HIST1H2BKO60814 126 aa6.64□□□□□ -1.35
POLR2J3-213ENST00000508848 HIST1H2BJP06899 126 aa6.64□□□□□ -1.35
POLR2J3-213ENST00000508848 HIST1H2BOP23527 126 aa6.64□□□□□ -1.35
POLR2J3-213ENST00000508848 HIST1H2BBP33778 126 aa6.64□□□□□ -1.35
POLR2J3-213ENST00000508848 HIST1H2BDP58876 126 aa6.64□□□□□ -1.35
POLR2J3-213ENST00000508848 HIST1H2BCP62807 126 aa6.64□□□□□ -1.35
POLR2J3-213ENST00000508848 GAGE2BQ13066 116 aa6.64□□□□□ -1.35
POLR2J3-213ENST00000508848 HIST2H2BEQ16778 126 aa6.64□□□□□ -1.35
POLR2J3-213ENST00000508848 COA6Q5JTJ3 125 aaKnown RBP6.64□□□□□ -1.35
POLR2J3-213ENST00000508848 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.64□□□□□ -1.35
POLR2J3-213ENST00000508848 FAM19A2Q8N3H0 131 aa6.64□□□□□ -1.35
POLR2J3-213ENST00000508848 HIST1H2BHQ93079 126 aa6.64□□□□□ -1.35
POLR2J3-213ENST00000508848 HIST1H2BNQ99877 126 aa6.64□□□□□ -1.35
POLR2J3-213ENST00000508848 HIST1H2BMQ99879 126 aa6.64□□□□□ -1.35
POLR2J3-213ENST00000508848 TOMM7Q9P0U1 55 aa6.64□□□□□ -1.35
POLR2J3-213ENST00000508848 CHTOPQ9Y3Y2 248 aaKnown RBP6.64□□□□□ -1.35
POLR2J3-213ENST00000508848 A0A1W2PNN7 141 aa6.63□□□□□ -1.35
POLR2J3-213ENST00000508848 C11orf86A6NJI1 115 aa6.63□□□□□ -1.35
POLR2J3-213ENST00000508848 COX17Q14061 63 aa6.63□□□□□ -1.35
POLR2J3-213ENST00000508848 C9orf116Q5BN46 136 aaPredicted RBP6.63□□□□□ -1.35
POLR2J3-213ENST00000508848 DMBT1Q9UGM3 2413 aaPredicted RBP6.62□□□□□ -1.35
POLR2J3-213ENST00000508848 NUPR1O60356 82 aa6.62□□□□□ -1.35
POLR2J3-213ENST00000508848 SCO1O75880 301 aa6.62□□□□□ -1.35
POLR2J3-213ENST00000508848 RPL18AQ02543 176 aaKnown RBP6.62□□□□□ -1.35
POLR2J3-213ENST00000508848 KRTAP4-7Q9BYR0 210 aa6.62□□□□□ -1.35
POLR2J3-213ENST00000508848 PLA2G2DQ9UNK4 145 aa6.62□□□□□ -1.35
POLR2J3-213ENST00000508848 TMEM223A0PJW6 202 aa6.61□□□□□ -1.35
POLR2J3-213ENST00000508848 SPINK8P0C7L1 97 aa6.61□□□□□ -1.35
POLR2J3-213ENST00000508848 PLNP26678 52 aa6.61□□□□□ -1.35
POLR2J3-213ENST00000508848 TMEM170BQ5T4T1 132 aa6.61□□□□□ -1.35
POLR2J3-213ENST00000508848 KRTAP29-1A8MX34 341 aaPredicted RBP6.6□□□□□ -1.35
POLR2J3-213ENST00000508848 OXTP01178 125 aa6.6□□□□□ -1.35
POLR2J3-213ENST00000508848 TP73-AS1Q9UF72 201 aa6.6□□□□□ -1.35
POLR2J3-213ENST00000508848 MYCBP2O75592 4640 aa6.59□□□□□ -1.35
POLR2J3-213ENST00000508848 LINC00587B1AMM8 73 aa6.59□□□□□ -1.35
POLR2J3-213ENST00000508848 C9orf129Q5T035 196 aaKnown RBP6.59□□□□□ -1.35
POLR2J3-213ENST00000508848 ZNF625Q96I27 306 aaPredicted RBP6.59□□□□□ -1.35
POLR2J3-213ENST00000508848 MAP1LC3CQ9BXW4 147 aa6.59□□□□□ -1.35
POLR2J3-213ENST00000508848 PRR3P79522 188 aaKnown RBP6.58□□□□□ -1.36
POLR2J3-213ENST00000508848 SRSF9Q13242 221 aaKnown RBP eCLIP6.58□□□□□ -1.36
POLR2J3-213ENST00000508848 GAGE2EQ4V326 116 aa6.58□□□□□ -1.36
POLR2J3-213ENST00000508848 GAGE2DQ9UEU5 116 aa6.58□□□□□ -1.36
POLR2J3-213ENST00000508848 IGLV5-37A0A075B6J1 123 aa6.57□□□□□ -1.36
POLR2J3-213ENST00000508848 DPM2O94777 84 aa6.57□□□□□ -1.36
POLR2J3-213ENST00000508848 HERV-K104P63124 156 aa6.57□□□□□ -1.36
POLR2J3-213ENST00000508848 LBHQ53QV2 105 aaPredicted RBP6.57□□□□□ -1.36
POLR2J3-213ENST00000508848 KRTAP7-1Q8IUC3 87 aa6.57□□□□□ -1.36
POLR2J3-213ENST00000508848 FABP4P15090 132 aa6.56□□□□□ -1.36
POLR2J3-213ENST00000508848 SPINK6Q6UWN8 80 aa6.56□□□□□ -1.36
POLR2J3-213ENST00000508848 KRTAP19-1Q8IUB9 90 aa6.56□□□□□ -1.36
POLR2J3-213ENST00000508848 SYS1-DBNDD2H3BUS1 97 aa6.55□□□□□ -1.36
POLR2J3-213ENST00000508848 AKR1D1P51857 326 aa6.55□□□□□ -1.36
POLR2J3-213ENST00000508848 PET117Q6UWS5 81 aa6.55□□□□□ -1.36
POLR2J3-213ENST00000508848 PLEKHB2Q96CS7 222 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms