RNA–Protein interactions for RNA: ENST00000508708.1

CSNK1G3-204, Transcript of casein kinase 1 gamma 3, humanhuman

TSL 2

Gene CSNK1G3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-204ENST00000508708 HMCN2Q8NDA2 5059 aa14.5□□□□□ -0.09
CSNK1G3-204ENST00000508708 IGLV5-45A0A087WSX0 123 aa14.5□□□□□ -0.09
CSNK1G3-204ENST00000508708 TINCRA0A1B0GVN0 87 aa14.49□□□□□ -0.09
CSNK1G3-204ENST00000508708 FAM168BA1KXE4 195 aa14.49□□□□□ -0.09
CSNK1G3-204ENST00000508708 CST9LQ9H4G1 147 aa14.49□□□□□ -0.09
CSNK1G3-204ENST00000508708 TOMM7Q9P0U1 55 aa14.49□□□□□ -0.09
CSNK1G3-204ENST00000508708 NDUFC2-KCTD14E9PQ53 114 aa14.48□□□□□ -0.09
CSNK1G3-204ENST00000508708 PRSS2P07478 247 aa14.48□□□□□ -0.09
CSNK1G3-204ENST00000508708 PHF5AQ7RTV0 110 aaKnown RBP14.48□□□□□ -0.09
CSNK1G3-204ENST00000508708 KRTAP7-1Q8IUC3 87 aa14.48□□□□□ -0.09
CSNK1G3-204ENST00000508708 PACRGQ96M98 296 aaPredicted RBP14.48□□□□□ -0.09
CSNK1G3-204ENST00000508708 SMIM1B2RUZ4 78 aa14.47□□□□□ -0.09
CSNK1G3-204ENST00000508708 GAGE2EQ4V326 116 aa14.47□□□□□ -0.09
CSNK1G3-204ENST00000508708 LINC00469Q8N7U9 141 aa14.47□□□□□ -0.09
CSNK1G3-204ENST00000508708 GAGE2DQ9UEU5 116 aa14.47□□□□□ -0.09
CSNK1G3-204ENST00000508708 PMVKQ15126 192 aa14.46□□□□□ -0.09
CSNK1G3-204ENST00000508708 SRSF9Q13242 221 aaKnown RBP eCLIP14.45□□□□□ -0.1
CSNK1G3-204ENST00000508708 C6orf226Q5I0X4 101 aa14.45□□□□□ -0.1
CSNK1G3-204ENST00000508708 LINC00614P0C842 121 aa14.44□□□□□ -0.1
CSNK1G3-204ENST00000508708 CKS1BP61024 79 aa14.44□□□□□ -0.1
CSNK1G3-204ENST00000508708 C9orf129Q5T035 196 aaKnown RBP14.44□□□□□ -0.1
CSNK1G3-204ENST00000508708 PSORS1C2Q9UIG4 136 aa14.44□□□□□ -0.1
CSNK1G3-204ENST00000508708 HBDP02042 147 aa14.42□□□□□ -0.1
CSNK1G3-204ENST00000508708 PDZD11Q5EBL8 140 aa14.42□□□□□ -0.1
CSNK1G3-204ENST00000508708 SPINK6Q6UWN8 80 aa14.42□□□□□ -0.1
CSNK1G3-204ENST00000508708 FAM19A5Q7Z5A7 132 aaPredicted RBP14.42□□□□□ -0.1
CSNK1G3-204ENST00000508708 F8VRH5 84 aa14.41□□□□□ -0.1
CSNK1G3-204ENST00000508708 CXCL5P42830 114 aa14.41□□□□□ -0.1
CSNK1G3-204ENST00000508708 PMCHL1Q16048 86 aa14.41□□□□□ -0.1
CSNK1G3-204ENST00000508708 KRTAP11-1Q8IUC1 163 aa14.41□□□□□ -0.1
CSNK1G3-204ENST00000508708 IGLC3P0DOY3 106 aa14.4□□□□□ -0.1
CSNK1G3-204ENST00000508708 CBLN2Q8IUK8 224 aa14.39□□□□□ -0.11
CSNK1G3-204ENST00000508708 SPINK8P0C7L1 97 aa14.38□□□□□ -0.11
CSNK1G3-204ENST00000508708 COX7B2Q8TF08 81 aa14.38□□□□□ -0.11
CSNK1G3-204ENST00000508708 M0QXV9 152 aa14.37□□□□□ -0.11
CSNK1G3-204ENST00000508708 RAB5BP61020 215 aa14.37□□□□□ -0.11
CSNK1G3-204ENST00000508708 LINC01600Q96MT4 127 aa14.37□□□□□ -0.11
CSNK1G3-204ENST00000508708 SERTAD4-AS1Q5TG53 156 aa14.36□□□□□ -0.11
CSNK1G3-204ENST00000508708 C1orf137Q5JT78 98 aa14.35□□□□□ -0.11
CSNK1G3-204ENST00000508708 IGLV5-39A0A0G2JS06 123 aa14.34□□□□□ -0.11
CSNK1G3-204ENST00000508708 ZNF22P17026 224 aaPredicted RBP14.34□□□□□ -0.11
CSNK1G3-204ENST00000508708 H3BRM9 83 aa14.33□□□□□ -0.12
CSNK1G3-204ENST00000508708 ATP5LO75964 103 aa14.33□□□□□ -0.12
CSNK1G3-204ENST00000508708 XAGE1AQ9HD64 81 aa14.33□□□□□ -0.12
CSNK1G3-204ENST00000508708 NDUFA6P56556 154 aa14.32□□□□□ -0.12
CSNK1G3-204ENST00000508708 SLC7A5P1Q8MH63 180 aa14.32□□□□□ -0.12
CSNK1G3-204ENST00000508708 REG3GQ6UW15 175 aa14.31□□□□□ -0.12
CSNK1G3-204ENST00000508708 CHCHD1Q96BP2 118 aaKnown RBP14.31□□□□□ -0.12
CSNK1G3-204ENST00000508708 IGLV7-43P04211 117 aa14.3□□□□□ -0.12
CSNK1G3-204ENST00000508708 C11orf86A6NJI1 115 aa14.28□□□□□ -0.12
CSNK1G3-204ENST00000508708 ODF1Q14990 250 aa14.28□□□□□ -0.12
CSNK1G3-204ENST00000508708 BAGE3Q86Y29 109 aa14.28□□□□□ -0.12
CSNK1G3-204ENST00000508708 KRTAP10-8P60410 259 aa14.26□□□□□ -0.13
CSNK1G3-204ENST00000508708 UBE2BP63146 152 aa14.26□□□□□ -0.13
CSNK1G3-204ENST00000508708 C22orf24Q9Y442 160 aa14.26□□□□□ -0.13
CSNK1G3-204ENST00000508708 TRGC2P03986 189 aa14.24□□□□□ -0.13
CSNK1G3-204ENST00000508708 TP73-AS1Q9UF72 201 aa14.23□□□□□ -0.13
CSNK1G3-204ENST00000508708 TRAV12-1A0A0B4J245 112 aa14.22□□□□□ -0.13
CSNK1G3-204ENST00000508708 LINC00310P59036 64 aa14.22□□□□□ -0.13
CSNK1G3-204ENST00000508708 IFI27L1Q96BM0 104 aa14.22□□□□□ -0.13
CSNK1G3-204ENST00000508708 PLA2G2DQ9UNK4 145 aa14.22□□□□□ -0.13
CSNK1G3-204ENST00000508708 CHTOPQ9Y3Y2 248 aaKnown RBP14.22□□□□□ -0.13
CSNK1G3-204ENST00000508708 TMEM170BQ5T4T1 132 aa14.2□□□□□ -0.14
CSNK1G3-204ENST00000508708 DIRC1Q969H9 104 aa14.2□□□□□ -0.14
CSNK1G3-204ENST00000508708 H0Y9J4 135 aa14.19□□□□□ -0.14
CSNK1G3-204ENST00000508708 HSBP1O75506 76 aa14.19□□□□□ -0.14
CSNK1G3-204ENST00000508708 LBHQ53QV2 105 aaPredicted RBP14.19□□□□□ -0.14
CSNK1G3-204ENST00000508708 MRPL55Q7Z7F7 128 aaKnown RBP14.19□□□□□ -0.14
CSNK1G3-204ENST00000508708 FAM19A2Q8N3H0 131 aa14.19□□□□□ -0.14
CSNK1G3-204ENST00000508708 IGLV5-37A0A075B6J1 123 aa14.18□□□□□ -0.14
CSNK1G3-204ENST00000508708 COLCA2A8K830 154 aa14.17□□□□□ -0.14
CSNK1G3-204ENST00000508708 ZNF625Q96I27 306 aaPredicted RBP14.16□□□□□ -0.14
CSNK1G3-204ENST00000508708 ERG28Q9UKR5 140 aa14.16□□□□□ -0.14
CSNK1G3-204ENST00000508708 TMEM223A0PJW6 202 aa14.15□□□□□ -0.14
CSNK1G3-204ENST00000508708 NUPR1O60356 82 aa14.15□□□□□ -0.14
CSNK1G3-204ENST00000508708 SERF1AO75920 110 aa14.15□□□□□ -0.14
CSNK1G3-204ENST00000508708 PFN2P35080 140 aa14.15□□□□□ -0.14
CSNK1G3-204ENST00000508708 KRTAP1-4P0C5Y4 121 aa14.14□□□□□ -0.15
CSNK1G3-204ENST00000508708 SFTA2Q6UW10 78 aa14.13□□□□□ -0.15
CSNK1G3-204ENST00000508708 LINC00167Q96N53 147 aa14.13□□□□□ -0.15
CSNK1G3-204ENST00000508708 COX17Q14061 63 aa14.12□□□□□ -0.15
CSNK1G3-204ENST00000508708 UBR4Q5T4S7 5183 aa14.12□□□□□ -0.15
CSNK1G3-204ENST00000508708 ZNF861PO60384 105 aa14.11□□□□□ -0.15
CSNK1G3-204ENST00000508708 SND1-IT1Q9HBX3 110 aa14.11□□□□□ -0.15
CSNK1G3-204ENST00000508708 LEPROTL1O95214 131 aa14.09□□□□□ -0.15
CSNK1G3-204ENST00000508708 GAGE10A6NGK3 116 aa14.08□□□□□ -0.16
CSNK1G3-204ENST00000508708 RPL37AP8A6NKH3 93 aa14.08□□□□□ -0.16
CSNK1G3-204ENST00000508708 BCE1O60756 84 aa14.08□□□□□ -0.16
CSNK1G3-204ENST00000508708 VPREB1P12018 145 aa14.08□□□□□ -0.16
CSNK1G3-204ENST00000508708 PRR26Q8N8Z3 221 aa14.08□□□□□ -0.16
CSNK1G3-204ENST00000508708 SCO1O75880 301 aa14.07□□□□□ -0.16
CSNK1G3-204ENST00000508708 LRP2P98164 4655 aa14.07□□□□□ -0.16
CSNK1G3-204ENST00000508708 NKAPP1Q8N9T2 125 aa14.07□□□□□ -0.16
CSNK1G3-204ENST00000508708 Q8NDZ9 215 aa14.07□□□□□ -0.16
CSNK1G3-204ENST00000508708 H0Y8G0 127 aa14.04□□□□□ -0.16
CSNK1G3-204ENST00000508708 IGLV1-50A0A075B6I6 118 aa14.02□□□□□ -0.17
CSNK1G3-204ENST00000508708 KRTAP13-1Q8IUC0 172 aa14.02□□□□□ -0.17
CSNK1G3-204ENST00000508708 HSPB8Q9UJY1 196 aa14.02□□□□□ -0.17
CSNK1G3-204ENST00000508708 IGKV2-28A0A075B6P5 120 aa14□□□□□ -0.17
CSNK1G3-204ENST00000508708 IGKV2D-28P01615 120 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms