RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 CDKN2A-AS1Q9UH64 79 aa5.9□□□□□ -1.46
NUP54-207ENST00000508583 LRP1BQ9NZR2 4599 aa5.89□□□□□ -1.47
NUP54-207ENST00000508583 TRBV30A0A0K0K1B3 111 aa5.89□□□□□ -1.47
NUP54-207ENST00000508583 LOC107984640A0A0U1RRK4 108 aa5.89□□□□□ -1.47
NUP54-207ENST00000508583 C6orf226Q5I0X4 101 aa5.89□□□□□ -1.47
NUP54-207ENST00000508583 Q8IZM0 81 aa5.89□□□□□ -1.47
NUP54-207ENST00000508583 FAM19A2Q8N3H0 131 aa5.89□□□□□ -1.47
NUP54-207ENST00000508583 DPH3Q96FX2 82 aa5.89□□□□□ -1.47
NUP54-207ENST00000508583 SFTA2Q6UW10 78 aa5.88□□□□□ -1.47
NUP54-207ENST00000508583 Q6ZRU5 148 aa5.88□□□□□ -1.47
NUP54-207ENST00000508583 LINC00526Q96FQ7 95 aa5.88□□□□□ -1.47
NUP54-207ENST00000508583 KRTAP4-2Q9BYR5 136 aa5.88□□□□□ -1.47
NUP54-207ENST00000508583 TOMM7Q9P0U1 55 aa5.88□□□□□ -1.47
NUP54-207ENST00000508583 CHTOPQ9Y3Y2 248 aaKnown RBP5.88□□□□□ -1.47
NUP54-207ENST00000508583 HERC2O95714 4834 aa5.88□□□□□ -1.47
NUP54-207ENST00000508583 SMIM1B2RUZ4 78 aa5.87□□□□□ -1.47
NUP54-207ENST00000508583 F8VRH5 84 aa5.87□□□□□ -1.47
NUP54-207ENST00000508583 XGP55808 180 aa5.87□□□□□ -1.47
NUP54-207ENST00000508583 TMEM170BQ5T4T1 132 aa5.87□□□□□ -1.47
NUP54-207ENST00000508583 SCXQ7RTU7 201 aa5.87□□□□□ -1.47
NUP54-207ENST00000508583 MAP1LC3CQ9BXW4 147 aa5.87□□□□□ -1.47
NUP54-207ENST00000508583 KRTAP4-9Q9BYQ8 210 aa5.87□□□□□ -1.47
NUP54-207ENST00000508583 FAM30AQ9NZY2 134 aa5.87□□□□□ -1.47
NUP54-207ENST00000508583 APOBP04114 4563 aaKnown RBP5.87□□□□□ -1.47
NUP54-207ENST00000508583 FAM229AH3BQW9 127 aa5.86□□□□□ -1.47
NUP54-207ENST00000508583 PLNP26678 52 aa5.86□□□□□ -1.47
NUP54-207ENST00000508583 LINC00310P59036 64 aa5.86□□□□□ -1.47
NUP54-207ENST00000508583 HAMPP81172 84 aa5.86□□□□□ -1.47
NUP54-207ENST00000508583 CIRBPQ14011 172 aaKnown RBP5.86□□□□□ -1.47
NUP54-207ENST00000508583 KIAA0087Q14695 138 aa5.86□□□□□ -1.47
NUP54-207ENST00000508583 Q8N1X5 172 aa5.86□□□□□ -1.47
NUP54-207ENST00000508583 SPACA4Q8TDM5 124 aa5.86□□□□□ -1.47
NUP54-207ENST00000508583 COX7B2Q8TF08 81 aa5.86□□□□□ -1.47
NUP54-207ENST00000508583 IGKV2-24A0A0C4DH68 120 aa5.85□□□□□ -1.47
NUP54-207ENST00000508583 EPM2AB3EWF7 344 aa5.85□□□□□ -1.47
NUP54-207ENST00000508583 H0Y8G0 127 aa5.85□□□□□ -1.47
NUP54-207ENST00000508583 SPINK8P0C7L1 97 aa5.85□□□□□ -1.47
NUP54-207ENST00000508583 TLX1NBP0CAT3 122 aa5.85□□□□□ -1.47
NUP54-207ENST00000508583 FABP4P15090 132 aa5.85□□□□□ -1.47
NUP54-207ENST00000508583 ZNF22P17026 224 aaPredicted RBP5.85□□□□□ -1.47
NUP54-207ENST00000508583 PTTG1IPP53801 180 aa5.85□□□□□ -1.47
NUP54-207ENST00000508583 RPL18AQ02543 176 aaKnown RBP5.85□□□□□ -1.47
NUP54-207ENST00000508583 C21orf62-AS1Q17RA5 79 aa5.85□□□□□ -1.47
NUP54-207ENST00000508583 MAJINQ3KP22 176 aa5.85□□□□□ -1.47
NUP54-207ENST00000508583 COA6Q5JTJ3 125 aaKnown RBP5.85□□□□□ -1.47
NUP54-207ENST00000508583 CIRBP-AS1Q8TBR5 109 aa5.85□□□□□ -1.47
NUP54-207ENST00000508583 KRTAP17-1Q9BYP8 105 aa5.85□□□□□ -1.47
NUP54-207ENST00000508583 RYR1P21817 5038 aa5.84□□□□□ -1.47
NUP54-207ENST00000508583 HSPG2P98160 4391 aa5.84□□□□□ -1.47
NUP54-207ENST00000508583 C11orf86A6NJI1 115 aa5.84□□□□□ -1.47
NUP54-207ENST00000508583 PLA2G1BP04054 148 aaKnown RBP5.84□□□□□ -1.47
NUP54-207ENST00000508583 GAGE2BQ13066 116 aa5.84□□□□□ -1.47
NUP54-207ENST00000508583 UNQ6190/PRO20217Q6UXQ8 127 aa5.84□□□□□ -1.47
NUP54-207ENST00000508583 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.84□□□□□ -1.47
NUP54-207ENST00000508583 A0A096LNI7 61 aa5.83□□□□□ -1.48
NUP54-207ENST00000508583 IGLV5-39A0A0G2JS06 123 aa5.83□□□□□ -1.48
NUP54-207ENST00000508583 NDUFC2-KCTD14E9PQ53 114 aa5.83□□□□□ -1.48
NUP54-207ENST00000508583 NUPR1O60356 82 aa5.83□□□□□ -1.48
NUP54-207ENST00000508583 DPM2O94777 84 aa5.83□□□□□ -1.48
NUP54-207ENST00000508583 AKR1D1P51857 326 aa5.83□□□□□ -1.48
NUP54-207ENST00000508583 HERVK_113P61574 105 aa5.83□□□□□ -1.48
NUP54-207ENST00000508583 ODF1Q14990 250 aa5.83□□□□□ -1.48
NUP54-207ENST00000508583 C7orf33Q8WU49 177 aa5.83□□□□□ -1.48
NUP54-207ENST00000508583 C6orf48Q9UBA6 75 aa5.83□□□□□ -1.48
NUP54-207ENST00000508583 A0A087WYN8 130 aa5.82□□□□□ -1.48
NUP54-207ENST00000508583 S100A6P06703 90 aa5.82□□□□□ -1.48
NUP54-207ENST00000508583 CHTF8P0CG12 524 aa5.82□□□□□ -1.48
NUP54-207ENST00000508583 C10orf25Q5T742 122 aa5.82□□□□□ -1.48
NUP54-207ENST00000508583 C2orf82Q6UX34 121 aa5.82□□□□□ -1.48
NUP54-207ENST00000508583 STPG4Q8N801 248 aa5.82□□□□□ -1.48
NUP54-207ENST00000508583 PLAC8Q9NZF1 115 aa5.82□□□□□ -1.48
NUP54-207ENST00000508583 TMEM223A0PJW6 202 aa5.81□□□□□ -1.48
NUP54-207ENST00000508583 C20orf202A1L168 122 aa5.81□□□□□ -1.48
NUP54-207ENST00000508583 SYS1-DBNDD2H3BUS1 97 aa5.81□□□□□ -1.48
NUP54-207ENST00000508583 EIF4EBP3O60516 100 aaPredicted RBP5.81□□□□□ -1.48
NUP54-207ENST00000508583 GHRHP01286 108 aa5.81□□□□□ -1.48
NUP54-207ENST00000508583 IGKCP01834 107 aa5.81□□□□□ -1.48
NUP54-207ENST00000508583 SMR3BP02814 79 aaPredicted RBP5.81□□□□□ -1.48
NUP54-207ENST00000508583 Q5VSD8 79 aa5.81□□□□□ -1.48
NUP54-207ENST00000508583 LINC00587B1AMM8 73 aa5.8□□□□□ -1.48
NUP54-207ENST00000508583 S100A2P29034 98 aa5.8□□□□□ -1.48
NUP54-207ENST00000508583 COX17Q14061 63 aa5.8□□□□□ -1.48
NUP54-207ENST00000508583 GAGE2EQ4V326 116 aa5.8□□□□□ -1.48
NUP54-207ENST00000508583 PET117Q6UWS5 81 aa5.8□□□□□ -1.48
NUP54-207ENST00000508583 Q6ZRP5 223 aa5.8□□□□□ -1.48
NUP54-207ENST00000508583 KRTAP4-5Q9BYR2 181 aa5.8□□□□□ -1.48
NUP54-207ENST00000508583 GAGE2DQ9UEU5 116 aa5.8□□□□□ -1.48
NUP54-207ENST00000508583 PANO1I0J062 215 aa5.79□□□□□ -1.48
NUP54-207ENST00000508583 HERV-K104P63124 156 aa5.79□□□□□ -1.48
NUP54-207ENST00000508583 PLEKHB2Q96CS7 222 aa5.79□□□□□ -1.48
NUP54-207ENST00000508583 DNAH8Q96JB1 4490 aa5.78□□□□□ -1.48
NUP54-207ENST00000508583 KRTDAPP60985 99 aa5.78□□□□□ -1.48
NUP54-207ENST00000508583 RPL37AP61513 92 aaKnown RBP5.78□□□□□ -1.48
NUP54-207ENST00000508583 C9orf116Q5BN46 136 aaPredicted RBP5.78□□□□□ -1.48
NUP54-207ENST00000508583 MYMXA0A1B0GTQ4 84 aa5.77□□□□□ -1.49
NUP54-207ENST00000508583 LEPROTO15243 131 aa5.77□□□□□ -1.49
NUP54-207ENST00000508583 LGALS3P17931 250 aaKnown RBP5.77□□□□□ -1.49
NUP54-207ENST00000508583 NMUP48645 174 aa5.77□□□□□ -1.49
NUP54-207ENST00000508583 LINC01545Q5VT33 79 aa5.77□□□□□ -1.49
NUP54-207ENST00000508583 ZNF625Q96I27 306 aaPredicted RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms