RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 PHF5AQ7RTV0 110 aaKnown RBP5.58□□□□□ -1.52
PDLIM5-209ENST00000506632 TOMM6Q96B49 74 aa5.58□□□□□ -1.52
PDLIM5-209ENST00000506632 GNB1LQ9BYB4 327 aa5.58□□□□□ -1.52
PDLIM5-209ENST00000506632 PSORS1C2Q9UIG4 136 aa5.58□□□□□ -1.52
PDLIM5-209ENST00000506632 G0S2P27469 103 aa5.57□□□□□ -1.52
PDLIM5-209ENST00000506632 KRTAP10-8P60410 259 aa5.57□□□□□ -1.52
PDLIM5-209ENST00000506632 PAPPA-AS1Q5QFB9 102 aa5.57□□□□□ -1.52
PDLIM5-209ENST00000506632 COMMD7Q86VX2 200 aa5.57□□□□□ -1.52
PDLIM5-209ENST00000506632 KRTAP7-1Q8IUC3 87 aa5.57□□□□□ -1.52
PDLIM5-209ENST00000506632 ALKBH7Q9BT30 221 aaPredicted RBP5.57□□□□□ -1.52
PDLIM5-209ENST00000506632 CARHSP1Q9Y2V2 147 aaKnown RBP5.57□□□□□ -1.52
PDLIM5-209ENST00000506632 FAM168BA1KXE4 195 aa5.56□□□□□ -1.52
PDLIM5-209ENST00000506632 S100PP25815 95 aa5.56□□□□□ -1.52
PDLIM5-209ENST00000506632 HERVK_113P63121 156 aa5.56□□□□□ -1.52
PDLIM5-209ENST00000506632 COX19Q49B96 90 aa5.56□□□□□ -1.52
PDLIM5-209ENST00000506632 REG3GQ6UW15 175 aa5.56□□□□□ -1.52
PDLIM5-209ENST00000506632 ERASQ7Z444 233 aa5.56□□□□□ -1.52
PDLIM5-209ENST00000506632 KRTAP11-1Q8IUC1 163 aa5.56□□□□□ -1.52
PDLIM5-209ENST00000506632 Q8IZM0 81 aa5.56□□□□□ -1.52
PDLIM5-209ENST00000506632 CDKN2A-AS1Q9UH64 79 aa5.56□□□□□ -1.52
PDLIM5-209ENST00000506632 LINC01549A6NIU2 74 aa5.55□□□□□ -1.52
PDLIM5-209ENST00000506632 NDUFC2-KCTD14E9PQ53 114 aa5.55□□□□□ -1.52
PDLIM5-209ENST00000506632 MT-ND6P03923 174 aa5.55□□□□□ -1.52
PDLIM5-209ENST00000506632 SEC11AP67812 179 aa5.55□□□□□ -1.52
PDLIM5-209ENST00000506632 RHEBQ15382 184 aa5.55□□□□□ -1.52
PDLIM5-209ENST00000506632 GAGE2EQ4V326 116 aa5.55□□□□□ -1.52
PDLIM5-209ENST00000506632 C9orf129Q5T035 196 aaKnown RBP5.55□□□□□ -1.52
PDLIM5-209ENST00000506632 PACRGQ96M98 296 aaPredicted RBP5.55□□□□□ -1.52
PDLIM5-209ENST00000506632 GAGE2DQ9UEU5 116 aa5.55□□□□□ -1.52
PDLIM5-209ENST00000506632 UBR4Q5T4S7 5183 aa5.55□□□□□ -1.52
PDLIM5-209ENST00000506632 C1orf137Q5JT78 98 aa5.54□□□□□ -1.52
PDLIM5-209ENST00000506632 PET117Q6UWS5 81 aa5.54□□□□□ -1.52
PDLIM5-209ENST00000506632 FAM19A5Q7Z5A7 132 aaPredicted RBP5.54□□□□□ -1.52
PDLIM5-209ENST00000506632 SCGB3A1Q96QR1 104 aa5.54□□□□□ -1.52
PDLIM5-209ENST00000506632 IGLV5-45A0A087WSX0 123 aa5.53□□□□□ -1.52
PDLIM5-209ENST00000506632 TINCRA0A1B0GVN0 87 aa5.53□□□□□ -1.52
PDLIM5-209ENST00000506632 SMIM1B2RUZ4 78 aa5.53□□□□□ -1.52
PDLIM5-209ENST00000506632 IGLV7-43P04211 117 aa5.53□□□□□ -1.52
PDLIM5-209ENST00000506632 PRSS2P07478 247 aa5.53□□□□□ -1.52
PDLIM5-209ENST00000506632 C6orf226Q5I0X4 101 aa5.53□□□□□ -1.52
PDLIM5-209ENST00000506632 GEMIN7Q9H840 131 aaKnown RBP5.53□□□□□ -1.52
PDLIM5-209ENST00000506632 TOMM7Q9P0U1 55 aa5.53□□□□□ -1.52
PDLIM5-209ENST00000506632 M0QXV9 152 aa5.52□□□□□ -1.53
PDLIM5-209ENST00000506632 CKS1BP61024 79 aa5.52□□□□□ -1.53
PDLIM5-209ENST00000506632 FABP9Q0Z7S8 132 aa5.52□□□□□ -1.53
PDLIM5-209ENST00000506632 CST9LQ9H4G1 147 aa5.52□□□□□ -1.53
PDLIM5-209ENST00000506632 RPS10P5Q9NQ39 176 aa5.52□□□□□ -1.53
PDLIM5-209ENST00000506632 A0A096LNJ9 63 aa5.51□□□□□ -1.53
PDLIM5-209ENST00000506632 F8VRH5 84 aa5.51□□□□□ -1.53
PDLIM5-209ENST00000506632 CXCL5P42830 114 aa5.51□□□□□ -1.53
PDLIM5-209ENST00000506632 PDZD11Q5EBL8 140 aa5.51□□□□□ -1.53
PDLIM5-209ENST00000506632 FA2HQ7L5A8 372 aa5.51□□□□□ -1.53
PDLIM5-209ENST00000506632 LINC00469Q8N7U9 141 aa5.51□□□□□ -1.53
PDLIM5-209ENST00000506632 URB1-AS1Q96HZ7 61 aa5.51□□□□□ -1.53
PDLIM5-209ENST00000506632 PRYO14603 147 aa5.5□□□□□ -1.53
PDLIM5-209ENST00000506632 PMVKQ15126 192 aa5.5□□□□□ -1.53
PDLIM5-209ENST00000506632 C18orf32Q8TCD1 76 aa5.5□□□□□ -1.53
PDLIM5-209ENST00000506632 DIRC1Q969H9 104 aa5.5□□□□□ -1.53
PDLIM5-209ENST00000506632 H0Y9J4 135 aa5.49□□□□□ -1.53
PDLIM5-209ENST00000506632 UBE2BP63146 152 aa5.49□□□□□ -1.53
PDLIM5-209ENST00000506632 COX7B2Q8TF08 81 aa5.49□□□□□ -1.53
PDLIM5-209ENST00000506632 XAGE1AQ9HD64 81 aa5.49□□□□□ -1.53
PDLIM5-209ENST00000506632 SMCO4Q9NRQ5 59 aa5.49□□□□□ -1.53
PDLIM5-209ENST00000506632 KRTAP1-4P0C5Y4 121 aa5.48□□□□□ -1.53
PDLIM5-209ENST00000506632 IGLC3P0DOY3 106 aa5.48□□□□□ -1.53
PDLIM5-209ENST00000506632 TP73-AS1Q9UF72 201 aa5.48□□□□□ -1.53
PDLIM5-209ENST00000506632 C22orf24Q9Y442 160 aa5.48□□□□□ -1.53
PDLIM5-209ENST00000506632 TRAPPC1Q9Y5R8 145 aa5.48□□□□□ -1.53
PDLIM5-209ENST00000506632 IGLV5-39A0A0G2JS06 123 aa5.47□□□□□ -1.53
PDLIM5-209ENST00000506632 APOC3P02656 99 aa5.47□□□□□ -1.53
PDLIM5-209ENST00000506632 SPINK8P0C7L1 97 aa5.47□□□□□ -1.53
PDLIM5-209ENST00000506632 LINC00614P0C842 121 aa5.47□□□□□ -1.53
PDLIM5-209ENST00000506632 YPEL4Q96NS1 127 aa5.47□□□□□ -1.53
PDLIM5-209ENST00000506632 SNAPINO95295 136 aa5.46□□□□□ -1.54
PDLIM5-209ENST00000506632 HBDP02042 147 aa5.46□□□□□ -1.54
PDLIM5-209ENST00000506632 ZNF22P17026 224 aaPredicted RBP5.46□□□□□ -1.54
PDLIM5-209ENST00000506632 SVBPQ8N300 66 aa5.46□□□□□ -1.54
PDLIM5-209ENST00000506632 PRR26Q8N8Z3 221 aa5.46□□□□□ -1.54
PDLIM5-209ENST00000506632 IGLV1-50A0A075B6I6 118 aa5.45□□□□□ -1.54
PDLIM5-209ENST00000506632 IGLV5-37A0A075B6J1 123 aa5.45□□□□□ -1.54
PDLIM5-209ENST00000506632 A4D1N5 150 aa5.45□□□□□ -1.54
PDLIM5-209ENST00000506632 H3BRM9 83 aa5.45□□□□□ -1.54
PDLIM5-209ENST00000506632 NUPR1O60356 82 aa5.45□□□□□ -1.54
PDLIM5-209ENST00000506632 ZNF861PO60384 105 aa5.45□□□□□ -1.54
PDLIM5-209ENST00000506632 LBHQ53QV2 105 aaPredicted RBP5.45□□□□□ -1.54
PDLIM5-209ENST00000506632 MRPL55Q7Z7F7 128 aaKnown RBP5.45□□□□□ -1.54
PDLIM5-209ENST00000506632 LRP2P98164 4655 aa5.45□□□□□ -1.54
PDLIM5-209ENST00000506632 RAB5BP61020 215 aa5.44□□□□□ -1.54
PDLIM5-209ENST00000506632 PMCHL1Q16048 86 aa5.44□□□□□ -1.54
PDLIM5-209ENST00000506632 NDUFA5Q16718 116 aa5.44□□□□□ -1.54
PDLIM5-209ENST00000506632 ATP5LO75964 103 aa5.43□□□□□ -1.54
PDLIM5-209ENST00000506632 LINC00310P59036 64 aa5.43□□□□□ -1.54
PDLIM5-209ENST00000506632 LINC00167Q96N53 147 aa5.43□□□□□ -1.54
PDLIM5-209ENST00000506632 KRTAP23-1A1A580 65 aa5.42□□□□□ -1.54
PDLIM5-209ENST00000506632 C11orf86A6NJI1 115 aa5.42□□□□□ -1.54
PDLIM5-209ENST00000506632 BCE1O60756 84 aa5.42□□□□□ -1.54
PDLIM5-209ENST00000506632 NDUFA6P56556 154 aa5.42□□□□□ -1.54
PDLIM5-209ENST00000506632 BAGE3Q86Y29 109 aa5.41□□□□□ -1.54
PDLIM5-209ENST00000506632 CHCHD1Q96BP2 118 aaKnown RBP5.41□□□□□ -1.54
PDLIM5-209ENST00000506632 ERG28Q9UKR5 140 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms