RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 CHCHD10Q8WYQ3 142 aaPredicted RBP14.56□□□□□ -0.08
UBE2D3-216ENST00000503742 TM2D3Q9BRN9 247 aa14.56□□□□□ -0.08
UBE2D3-216ENST00000503742 A0A0U1RRA0 63 aa14.55□□□□□ -0.08
UBE2D3-216ENST00000503742 ERG28Q9UKR5 140 aa14.55□□□□□ -0.08
UBE2D3-216ENST00000503742 SOSTDC1Q6X4U4 206 aa14.54□□□□□ -0.08
UBE2D3-216ENST00000503742 PPDPFQ9H3Y8 114 aa14.54□□□□□ -0.08
UBE2D3-216ENST00000503742 PRR34Q9NV39 138 aa14.54□□□□□ -0.08
UBE2D3-216ENST00000503742 PSMB2P49721 201 aa14.54□□□□□ -0.08
UBE2D3-216ENST00000503742 FOXI1Q12951 378 aa14.54□□□□□ -0.08
UBE2D3-216ENST00000503742 SFTA2Q6UW10 78 aa14.54□□□□□ -0.08
UBE2D3-216ENST00000503742 NBEAL1Q6ZS30 2694 aa14.54□□□□□ -0.08
UBE2D3-216ENST00000503742 COPS9Q8WXC6 57 aa14.53□□□□□ -0.08
UBE2D3-216ENST00000503742 HUWE1Q7Z6Z7 4374 aaKnown RBP14.53□□□□□ -0.08
UBE2D3-216ENST00000503742 DEFB131BA0A096LNP1 70 aa14.53□□□□□ -0.08
UBE2D3-216ENST00000503742 Q8IZM0 81 aa14.53□□□□□ -0.08
UBE2D3-216ENST00000503742 MDFIQ99750 246 aa14.53□□□□□ -0.08
UBE2D3-216ENST00000503742 IGLV10-54A0A075B6I4 117 aa14.52□□□□□ -0.09
UBE2D3-216ENST00000503742 COX7A2LO14548 114 aa14.51□□□□□ -0.09
UBE2D3-216ENST00000503742 MTURNQ8N3F0 131 aa14.51□□□□□ -0.09
UBE2D3-216ENST00000503742 SMCPP49901 116 aaPredicted RBP14.51□□□□□ -0.09
UBE2D3-216ENST00000503742 C6orf226Q5I0X4 101 aa14.5□□□□□ -0.09
UBE2D3-216ENST00000503742 KLK12Q9UKR0 248 aa14.5□□□□□ -0.09
UBE2D3-216ENST00000503742 IBA57-AS1B1ANH7 110 aa14.49□□□□□ -0.09
UBE2D3-216ENST00000503742 M0QXV9 152 aa14.49□□□□□ -0.09
UBE2D3-216ENST00000503742 TEN1Q86WV5 123 aa14.49□□□□□ -0.09
UBE2D3-216ENST00000503742 H7C2G1 150 aa14.49□□□□□ -0.09
UBE2D3-216ENST00000503742 DEFB121Q5J5C9 76 aa14.49□□□□□ -0.09
UBE2D3-216ENST00000503742 ENHOQ6UWT2 76 aa14.49□□□□□ -0.09
UBE2D3-216ENST00000503742 TCL1BO95988 128 aa14.48□□□□□ -0.09
UBE2D3-216ENST00000503742 KIAA0087Q14695 138 aa14.48□□□□□ -0.09
UBE2D3-216ENST00000503742 WFDC10BQ8IUB3 73 aa14.48□□□□□ -0.09
UBE2D3-216ENST00000503742 PPDPFLQ8WWR9 84 aa14.48□□□□□ -0.09
UBE2D3-216ENST00000503742 ESRGQ1W209 222 aa14.47□□□□□ -0.09
UBE2D3-216ENST00000503742 MIR7-3HGQ8N6C7 128 aa14.47□□□□□ -0.09
UBE2D3-216ENST00000503742 MRAPQ8TCY5 172 aa14.47□□□□□ -0.09
UBE2D3-216ENST00000503742 TRBV30A0A0K0K1B3 111 aa14.46□□□□□ -0.09
UBE2D3-216ENST00000503742 Q1RN00 199 aa14.45□□□□□ -0.1
UBE2D3-216ENST00000503742 SCGB1C2P0DMR2 95 aa14.45□□□□□ -0.1
UBE2D3-216ENST00000503742 MALP21145 153 aa14.44□□□□□ -0.1
UBE2D3-216ENST00000503742 LINC00158P58513 81 aa14.44□□□□□ -0.1
UBE2D3-216ENST00000503742 MGAM2Q2M2H8 2515 aa14.43□□□□□ -0.1
UBE2D3-216ENST00000503742 TRIAP1O43715 76 aa14.43□□□□□ -0.1
UBE2D3-216ENST00000503742 RPL13AP40429 203 aaKnown RBP14.43□□□□□ -0.1
UBE2D3-216ENST00000503742 C2orf82Q6UX34 121 aa14.43□□□□□ -0.1
UBE2D3-216ENST00000503742 TRAV10A0A0B4J240 114 aa14.42□□□□□ -0.1
UBE2D3-216ENST00000503742 CXCL5P42830 114 aa14.42□□□□□ -0.1
UBE2D3-216ENST00000503742 TRAV8-4A0A0B4J246 113 aa14.42□□□□□ -0.1
UBE2D3-216ENST00000503742 KLK5Q9Y337 293 aaPredicted RBP14.42□□□□□ -0.1
UBE2D3-216ENST00000503742 UBE2WQ96B02 151 aa14.41□□□□□ -0.1
UBE2D3-216ENST00000503742 CRPP02741 224 aa14.4□□□□□ -0.1
UBE2D3-216ENST00000503742 PFN2P35080 140 aa14.4□□□□□ -0.1
UBE2D3-216ENST00000503742 CKS1BP61024 79 aa14.4□□□□□ -0.1
UBE2D3-216ENST00000503742 CFAP161Q6P656 301 aa14.4□□□□□ -0.1
UBE2D3-216ENST00000503742 A0A1B0GV72 72 aa14.4□□□□□ -0.1
UBE2D3-216ENST00000503742 CCL18P55774 89 aa14.39□□□□□ -0.11
UBE2D3-216ENST00000503742 LINC01600Q96MT4 127 aa14.38□□□□□ -0.11
UBE2D3-216ENST00000503742 CDIP1Q9H305 208 aa14.38□□□□□ -0.11
UBE2D3-216ENST00000503742 LINC01556Q5JQF7 62 aa14.37□□□□□ -0.11
UBE2D3-216ENST00000503742 C15orf53Q8NAA6 179 aa14.37□□□□□ -0.11
UBE2D3-216ENST00000503742 SND1-IT1Q9HBX3 110 aa14.37□□□□□ -0.11
UBE2D3-216ENST00000503742 SLC25A20O43772 301 aa14.36□□□□□ -0.11
UBE2D3-216ENST00000503742 ATXN8Q156A1 80 aa14.36□□□□□ -0.11
UBE2D3-216ENST00000503742 CARD19Q96LW7 228 aa14.36□□□□□ -0.11
UBE2D3-216ENST00000503742 KRTAP26-1Q6PEX3 210 aa14.35□□□□□ -0.11
UBE2D3-216ENST00000503742 ANKRD29Q8N6D5 301 aa14.35□□□□□ -0.11
UBE2D3-216ENST00000503742 DNAH9Q9NYC9 4486 aa14.35□□□□□ -0.11
UBE2D3-216ENST00000503742 IGKV2-28A0A075B6P5 120 aa14.34□□□□□ -0.11
UBE2D3-216ENST00000503742 IGKV2D-28P01615 120 aa14.34□□□□□ -0.11
UBE2D3-216ENST00000503742 SPAG11BQ08648 103 aa14.34□□□□□ -0.11
UBE2D3-216ENST00000503742 COX17Q14061 63 aa14.34□□□□□ -0.11
UBE2D3-216ENST00000503742 COX6CP09669 75 aa14.34□□□□□ -0.11
UBE2D3-216ENST00000503742 TRAV13-2A0A0B4J235 113 aa14.33□□□□□ -0.12
UBE2D3-216ENST00000503742 C9JAW5 83 aa14.33□□□□□ -0.12
UBE2D3-216ENST00000503742 LINC00337Q8N6G1 96 aa14.32□□□□□ -0.12
UBE2D3-216ENST00000503742 C6orf223Q8N319 242 aa14.31□□□□□ -0.12
UBE2D3-216ENST00000503742 DNAH10OSP0CZ25 163 aa14.31□□□□□ -0.12
UBE2D3-216ENST00000503742 LINC01620Q4KN68 170 aa14.3□□□□□ -0.12
UBE2D3-216ENST00000503742 C10orf25Q5T742 122 aa14.29□□□□□ -0.12
UBE2D3-216ENST00000503742 C9orf116Q5BN46 136 aaPredicted RBP14.29□□□□□ -0.12
UBE2D3-216ENST00000503742 UNQ6190/PRO20217Q6UXQ8 127 aa14.29□□□□□ -0.12
UBE2D3-216ENST00000503742 LINC00526Q96FQ7 95 aa14.28□□□□□ -0.12
UBE2D3-216ENST00000503742 LINC00588Q9Y4M8 146 aa14.28□□□□□ -0.12
UBE2D3-216ENST00000503742 TRBV10-2A0A0K0K1G8 114 aa14.27□□□□□ -0.13
UBE2D3-216ENST00000503742 LST1O00453 97 aa14.27□□□□□ -0.13
UBE2D3-216ENST00000503742 NTN5Q8WTR8 489 aaPredicted RBP14.27□□□□□ -0.13
UBE2D3-216ENST00000503742 CLEC2BQ92478 149 aa14.27□□□□□ -0.13
UBE2D3-216ENST00000503742 XGP55808 180 aa14.26□□□□□ -0.13
UBE2D3-216ENST00000503742 GVQW2A0A096LPI5 108 aaPredicted RBP14.25□□□□□ -0.13
UBE2D3-216ENST00000503742 RPL28P46779 137 aaKnown RBP14.25□□□□□ -0.13
UBE2D3-216ENST00000503742 MT-ATP8P03928 68 aa14.24□□□□□ -0.13
UBE2D3-216ENST00000503742 MUC7Q8TAX7 377 aa14.24□□□□□ -0.13
UBE2D3-216ENST00000503742 B9D2Q9BPU9 175 aa14.24□□□□□ -0.13
UBE2D3-216ENST00000503742 C1orf43Q9BWL3 253 aa14.24□□□□□ -0.13
UBE2D3-216ENST00000503742 H3BT86 120 aa14.23□□□□□ -0.13
UBE2D3-216ENST00000503742 NDUFC2O95298 119 aa14.22□□□□□ -0.13
UBE2D3-216ENST00000503742 C15orf56Q8N910 161 aa14.22□□□□□ -0.13
UBE2D3-216ENST00000503742 COL7A1Q02388 2944 aa14.21□□□□□ -0.13
UBE2D3-216ENST00000503742 DNAH1Q9P2D7 4330 aa14.21□□□□□ -0.14
UBE2D3-216ENST00000503742 C6orf48Q9UBA6 75 aa14.2□□□□□ -0.14
UBE2D3-216ENST00000503742 IGKV2D-24A0A075B6R9 120 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms