RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 C4orf3Q8WVX3 66 aa3.7□□□□□ -1.82
CLDND1-208ENST00000503004 TENM1Q9UKZ4 2725 aa3.7□□□□□ -1.82
CLDND1-208ENST00000503004 A0A0J9YXY3 114 aa3.7□□□□□ -1.82
CLDND1-208ENST00000503004 CD28P10747 220 aa3.7□□□□□ -1.82
CLDND1-208ENST00000503004 DAZ2Q13117 558 aaKnown RBP3.7□□□□□ -1.82
CLDND1-208ENST00000503004 PAPPA-AS1Q5QFB9 102 aa3.7□□□□□ -1.82
CLDND1-208ENST00000503004 FAM104AQ969W3 186 aa3.7□□□□□ -1.82
CLDND1-208ENST00000503004 ESM1Q9NQ30 184 aa3.7□□□□□ -1.82
CLDND1-208ENST00000503004 DAZ3Q9NR90 486 aaKnown RBP3.7□□□□□ -1.82
CLDND1-208ENST00000503004 DNAJC9-AS1A6NH13 148 aa3.69□□□□□ -1.82
CLDND1-208ENST00000503004 H7BZZ5 65 aa3.69□□□□□ -1.82
CLDND1-208ENST00000503004 ODF3L2Q3SX64 289 aa3.69□□□□□ -1.82
CLDND1-208ENST00000503004 C20orf197Q8N268 126 aa3.69□□□□□ -1.82
CLDND1-208ENST00000503004 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.69□□□□□ -1.82
CLDND1-208ENST00000503004 IGKV2-29A2NJV5 120 aaPredicted RBP3.69□□□□□ -1.82
CLDND1-208ENST00000503004 XCL1P47992 114 aa3.69□□□□□ -1.82
CLDND1-208ENST00000503004 C11orf72Q8NBR9 251 aa3.69□□□□□ -1.82
CLDND1-208ENST00000503004 ZNF625Q96I27 306 aaPredicted RBP3.69□□□□□ -1.82
CLDND1-208ENST00000503004 PLA2G2DQ9UNK4 145 aa3.69□□□□□ -1.82
CLDND1-208ENST00000503004 HILS1P60008 231 aa3.68□□□□□ -1.82
CLDND1-208ENST00000503004 Q6JHZ5 121 aa3.68□□□□□ -1.82
CLDND1-208ENST00000503004 Q9HAA7 133 aa3.68□□□□□ -1.82
CLDND1-208ENST00000503004 TRRAPQ9Y4A5 3859 aa3.68□□□□□ -1.82
CLDND1-208ENST00000503004 A8MTW9 85 aa3.68□□□□□ -1.82
CLDND1-208ENST00000503004 LEPROTO15243 131 aa3.68□□□□□ -1.82
CLDND1-208ENST00000503004 IGHV3-30-3P0DP02 117 aa3.68□□□□□ -1.82
CLDND1-208ENST00000503004 CD164Q04900 197 aa3.68□□□□□ -1.82
CLDND1-208ENST00000503004 LITAFQ99732 161 aa3.68□□□□□ -1.82
CLDND1-208ENST00000503004 WFDC10AQ9H1F0 79 aa3.68□□□□□ -1.82
CLDND1-208ENST00000503004 ATRQ13535 2644 aa3.67□□□□□ -1.82
CLDND1-208ENST00000503004 INSP01308 110 aa3.67□□□□□ -1.82
CLDND1-208ENST00000503004 IGHV3-53P01767 116 aa3.67□□□□□ -1.82
CLDND1-208ENST00000503004 BAALC-AS2P0C853 105 aa3.67□□□□□ -1.82
CLDND1-208ENST00000503004 LINC00467Q9BRT7 94 aa3.67□□□□□ -1.82
CLDND1-208ENST00000503004 UBE2D4Q9Y2X8 147 aa3.67□□□□□ -1.82
CLDND1-208ENST00000503004 TRGV1A0A0A0MS02 117 aa3.67□□□□□ -1.82
CLDND1-208ENST00000503004 CCL24O00175 119 aa3.67□□□□□ -1.82
CLDND1-208ENST00000503004 BEAN1Q3B7T3 259 aa3.67□□□□□ -1.82
CLDND1-208ENST00000503004 C1orf158Q8N1D5 194 aa3.67□□□□□ -1.82
CLDND1-208ENST00000503004 WFDC9Q8NEX5 89 aa3.67□□□□□ -1.82
CLDND1-208ENST00000503004 CHCHD7Q9BUK0 85 aa3.67□□□□□ -1.82
CLDND1-208ENST00000503004 TRBV7-6A0A0J9YX20 115 aa3.66□□□□□ -1.82
CLDND1-208ENST00000503004 TIMM17BO60830 172 aa3.66□□□□□ -1.82
CLDND1-208ENST00000503004 RPL28P46779 137 aaKnown RBP3.66□□□□□ -1.82
CLDND1-208ENST00000503004 NDUFA12Q9UI09 145 aa3.66□□□□□ -1.82
CLDND1-208ENST00000503004 BAHCC1Q9P281 2608 aa3.66□□□□□ -1.82
CLDND1-208ENST00000503004 NSD1Q96L73 2696 aaPredicted RBP3.66□□□□□ -1.82
CLDND1-208ENST00000503004 CCKP06307 115 aa3.66□□□□□ -1.82
CLDND1-208ENST00000503004 MRPS36P82909 103 aaKnown RBP3.66□□□□□ -1.82
CLDND1-208ENST00000503004 FAM229BQ4G0N7 80 aa3.66□□□□□ -1.82
CLDND1-208ENST00000503004 Q6ZTI0 123 aa3.66□□□□□ -1.82
CLDND1-208ENST00000503004 LINC00846Q9NV44 126 aa3.66□□□□□ -1.82
CLDND1-208ENST00000503004 PAX4O43316 350 aa3.66□□□□□ -1.82
CLDND1-208ENST00000503004 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.66□□□□□ -1.82
CLDND1-208ENST00000503004 LINC01006Q8NI28 216 aa3.66□□□□□ -1.82
CLDND1-208ENST00000503004 C14orf132Q9NPU4 83 aa3.66□□□□□ -1.82
CLDND1-208ENST00000503004 PLA2G2AP14555 144 aa3.65□□□□□ -1.82
CLDND1-208ENST00000503004 KRTAP1-1Q07627 177 aa3.65□□□□□ -1.82
CLDND1-208ENST00000503004 C9orf129Q5T035 196 aaKnown RBP3.65□□□□□ -1.82
CLDND1-208ENST00000503004 KRTAP9-8Q9BYQ0 159 aa3.65□□□□□ -1.82
CLDND1-208ENST00000503004 CDKN2A-AS1Q9UH64 79 aa3.65□□□□□ -1.82
CLDND1-208ENST00000503004 TRAV23DV6A0A075B6W5 121 aa3.65□□□□□ -1.83
CLDND1-208ENST00000503004 RBM3P98179 157 aaKnown RBP3.65□□□□□ -1.83
CLDND1-208ENST00000503004 SOSTDC1Q6X4U4 206 aa3.65□□□□□ -1.83
CLDND1-208ENST00000503004 Q6ZRU5 148 aa3.65□□□□□ -1.83
CLDND1-208ENST00000503004 PRR15Q8IV56 129 aa3.65□□□□□ -1.83
CLDND1-208ENST00000503004 MPLKIPQ8TAP9 179 aa3.65□□□□□ -1.83
CLDND1-208ENST00000503004 FAM218AQ96MZ4 157 aa3.65□□□□□ -1.83
CLDND1-208ENST00000503004 SMR3AQ99954 134 aa3.65□□□□□ -1.83
CLDND1-208ENST00000503004 NOP10Q9NPE3 64 aaKnown RBP3.65□□□□□ -1.83
CLDND1-208ENST00000503004 IGHV1-58A0A0C4DH39 117 aa3.64□□□□□ -1.83
CLDND1-208ENST00000503004 DNAL4O96015 105 aa3.64□□□□□ -1.83
CLDND1-208ENST00000503004 PIK3CD-AS1Q5SR53 167 aa3.64□□□□□ -1.83
CLDND1-208ENST00000503004 RMI2Q96E14 147 aa3.64□□□□□ -1.83
CLDND1-208ENST00000503004 TEP1Q99973 2627 aaKnown RBP3.64□□□□□ -1.83
CLDND1-208ENST00000503004 COX7A2LO14548 114 aa3.64□□□□□ -1.83
CLDND1-208ENST00000503004 GIG44P09565 113 aaPredicted RBP3.64□□□□□ -1.83
CLDND1-208ENST00000503004 INAFM2P0DMQ5 153 aa3.64□□□□□ -1.83
CLDND1-208ENST00000503004 COX6A2Q02221 97 aa3.64□□□□□ -1.83
CLDND1-208ENST00000503004 MIAQ16674 131 aa3.64□□□□□ -1.83
CLDND1-208ENST00000503004 C11orf45Q8TAV5 145 aa3.64□□□□□ -1.83
CLDND1-208ENST00000503004 VSIG2Q96IQ7 327 aa3.64□□□□□ -1.83
CLDND1-208ENST00000503004 HIVEP1P15822 2718 aa3.63□□□□□ -1.83
CLDND1-208ENST00000503004 F8WEM9 126 aa3.63□□□□□ -1.83
CLDND1-208ENST00000503004 NTM-AS1Q6ZSK4 140 aa3.63□□□□□ -1.83
CLDND1-208ENST00000503004 SNURFQ9Y675 71 aa3.63□□□□□ -1.83
CLDND1-208ENST00000503004 LOC100131303A0A0U1RQF7 123 aa3.63□□□□□ -1.83
CLDND1-208ENST00000503004 FAM222AQ5U5X8 452 aa3.63□□□□□ -1.83
CLDND1-208ENST00000503004 C6orf223Q8N319 242 aa3.62□□□□□ -1.83
CLDND1-208ENST00000503004 FLNBO75369 2602 aaKnown RBP3.62□□□□□ -1.83
CLDND1-208ENST00000503004 TRGV2A0A075B6R0 118 aa3.62□□□□□ -1.83
CLDND1-208ENST00000503004 PLAC8L1A1L4L8 177 aa3.62□□□□□ -1.83
CLDND1-208ENST00000503004 K7EQD1 137 aa3.62□□□□□ -1.83
CLDND1-208ENST00000503004 RPL36AP83881 106 aaKnown RBP3.62□□□□□ -1.83
CLDND1-208ENST00000503004 S100A7L2Q5SY68 101 aa3.62□□□□□ -1.83
CLDND1-208ENST00000503004 LINC00242Q5T6M2 205 aa3.62□□□□□ -1.83
CLDND1-208ENST00000503004 RPL36ALQ969Q0 106 aaKnown RBP3.62□□□□□ -1.83
CLDND1-208ENST00000503004 NCR3O14931 201 aa3.62□□□□□ -1.83
CLDND1-208ENST00000503004 SLPIP03973 132 aa3.62□□□□□ -1.83
CLDND1-208ENST00000503004 RNASE1P07998 156 aaKnown RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 143.6 ms