RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 LINC01545Q5VT33 79 aa2.2□□□□□ -2.06
HMGB1P3-201ENST00000502802 LINC00311Q8N616 119 aa2.2□□□□□ -2.06
HMGB1P3-201ENST00000502802 Q8N6K4 173 aa2.2□□□□□ -2.06
HMGB1P3-201ENST00000502802 ZNF431Q8TF32 576 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P3-201ENST00000502802 CIB3Q96Q77 187 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P3-201ENST00000502802 VAMP8Q9BV40 100 aa2.2□□□□□ -2.06
HMGB1P3-201ENST00000502802 SEC11CQ9BY50 192 aa2.2□□□□□ -2.06
HMGB1P3-201ENST00000502802 KRTAP4-4Q9BYR3 166 aa2.2□□□□□ -2.06
HMGB1P3-201ENST00000502802 PRO1933Q9H354 126 aa2.2□□□□□ -2.06
HMGB1P3-201ENST00000502802 EPPK1P58107 5090 aaKnown RBP2.19□□□□□ -2.06
HMGB1P3-201ENST00000502802 A0A087WXM4 84 aa2.19□□□□□ -2.06
HMGB1P3-201ENST00000502802 IGHV1-58A0A0C4DH39 117 aa2.19□□□□□ -2.06
HMGB1P3-201ENST00000502802 LOC107984640A0A0U1RRK4 108 aa2.19□□□□□ -2.06
HMGB1P3-201ENST00000502802 OR2T8A6NH00 312 aa2.19□□□□□ -2.06
HMGB1P3-201ENST00000502802 GABARAPH6UMI1 98 aa2.19□□□□□ -2.06
HMGB1P3-201ENST00000502802 GEMIN2O14893 280 aaKnown RBP2.19□□□□□ -2.06
HMGB1P3-201ENST00000502802 UQCRQO14949 82 aa2.19□□□□□ -2.06
HMGB1P3-201ENST00000502802 CST7O76096 145 aa2.19□□□□□ -2.06
HMGB1P3-201ENST00000502802 CRPP02741 224 aa2.19□□□□□ -2.06
HMGB1P3-201ENST00000502802 TRGC2P03986 189 aa2.19□□□□□ -2.06
HMGB1P3-201ENST00000502802 ZNF137PP52743 207 aa2.19□□□□□ -2.06
HMGB1P3-201ENST00000502802 Q1T7F1 81 aa2.19□□□□□ -2.06
HMGB1P3-201ENST00000502802 Q5BKY6 102 aa2.19□□□□□ -2.06
HMGB1P3-201ENST00000502802 LCE1CQ5T751 118 aa2.19□□□□□ -2.06
HMGB1P3-201ENST00000502802 LCE1BQ5T7P3 118 aa2.19□□□□□ -2.06
HMGB1P3-201ENST00000502802 KRTAP5-4Q6L8H1 288 aa2.19□□□□□ -2.06
HMGB1P3-201ENST00000502802 OR2T10Q8NGZ9 312 aa2.19□□□□□ -2.06
HMGB1P3-201ENST00000502802 ATP6V0E2Q8NHE4 81 aa2.19□□□□□ -2.06
HMGB1P3-201ENST00000502802 MYOZ3Q8TDC0 251 aa2.19□□□□□ -2.06
HMGB1P3-201ENST00000502802 FKBP11Q9NYL4 201 aa2.19□□□□□ -2.06
HMGB1P3-201ENST00000502802 TAS2R4Q9NYW5 299 aa2.19□□□□□ -2.06
HMGB1P3-201ENST00000502802 RABAC1Q9UI14 185 aa2.19□□□□□ -2.06
HMGB1P3-201ENST00000502802 TMEM30CPA0ZSE6 113 aa2.18□□□□□ -2.06
HMGB1P3-201ENST00000502802 A8MWV9 139 aa2.18□□□□□ -2.06
HMGB1P3-201ENST00000502802 G3V318 75 aa2.18□□□□□ -2.06
HMGB1P3-201ENST00000502802 PYYP10082 97 aa2.18□□□□□ -2.06
HMGB1P3-201ENST00000502802 RNASE4P34096 147 aaKnown RBP2.18□□□□□ -2.06
HMGB1P3-201ENST00000502802 FOXA3P55318 350 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P3-201ENST00000502802 LSM3P62310 102 aaKnown RBP2.18□□□□□ -2.06
HMGB1P3-201ENST00000502802 DEFA5Q01523 94 aa2.18□□□□□ -2.06
HMGB1P3-201ENST00000502802 CATR1Q13166 79 aa2.18□□□□□ -2.06
HMGB1P3-201ENST00000502802 MPV17LQ2QL34 196 aa2.18□□□□□ -2.06
HMGB1P3-201ENST00000502802 Q56UQ5 140 aa2.18□□□□□ -2.06
HMGB1P3-201ENST00000502802 SPANXN5Q5MJ07 72 aa2.18□□□□□ -2.06
HMGB1P3-201ENST00000502802 Q6AWC8 147 aa2.18□□□□□ -2.06
HMGB1P3-201ENST00000502802 SBSPONQ8IVN8 264 aa2.18□□□□□ -2.06
HMGB1P3-201ENST00000502802 C4orf3Q8WVX3 66 aa2.18□□□□□ -2.06
HMGB1P3-201ENST00000502802 ZNF625Q96I27 306 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P3-201ENST00000502802 NABP2Q9BQ15 211 aa2.18□□□□□ -2.06
HMGB1P3-201ENST00000502802 ATG5Q9H1Y0 275 aa2.18□□□□□ -2.06
HMGB1P3-201ENST00000502802 NHP2Q9NX24 153 aaKnown RBP2.18□□□□□ -2.06
HMGB1P3-201ENST00000502802 UQCR10Q9UDW1 63 aa2.18□□□□□ -2.06
HMGB1P3-201ENST00000502802 ALMS1Q8TCU4 4167 aa2.18□□□□□ -2.06
HMGB1P3-201ENST00000502802 VPS13DQ5THJ4 4388 aa2.18□□□□□ -2.06
HMGB1P3-201ENST00000502802 DNAH10Q8IVF4 4471 aa2.18□□□□□ -2.06
HMGB1P3-201ENST00000502802 KMT2AQ03164 3969 aa2.17□□□□□ -2.06
HMGB1P3-201ENST00000502802 TRAV12-2A0A075B6T6 113 aa2.17□□□□□ -2.06
HMGB1P3-201ENST00000502802 TRAV13-1A0A0B4J241 112 aa2.17□□□□□ -2.06
HMGB1P3-201ENST00000502802 C3orf85A0A1B0GTC6 90 aa2.17□□□□□ -2.06
HMGB1P3-201ENST00000502802 MCRIP1C9JLW8 97 aa2.17□□□□□ -2.06
HMGB1P3-201ENST00000502802 F8W1H4 67 aa2.17□□□□□ -2.06
HMGB1P3-201ENST00000502802 H3BQ15 152 aa2.17□□□□□ -2.06
HMGB1P3-201ENST00000502802 M0R2P5 195 aa2.17□□□□□ -2.06
HMGB1P3-201ENST00000502802 TAX1BP3O14907 124 aa2.17□□□□□ -2.06
HMGB1P3-201ENST00000502802 YPEL1O60688 119 aa2.17□□□□□ -2.06
HMGB1P3-201ENST00000502802 NDUFA3O95167 84 aa2.17□□□□□ -2.06
HMGB1P3-201ENST00000502802 MRPS36P82909 103 aaKnown RBP2.17□□□□□ -2.06
HMGB1P3-201ENST00000502802 Q0VG73 95 aa2.17□□□□□ -2.06
HMGB1P3-201ENST00000502802 INSL4Q14641 139 aa2.17□□□□□ -2.06
HMGB1P3-201ENST00000502802 IZUMO2Q6UXV1 221 aa2.17□□□□□ -2.06
HMGB1P3-201ENST00000502802 ZNF833PQ6ZTB9 187 aa2.17□□□□□ -2.06
HMGB1P3-201ENST00000502802 PHF5AQ7RTV0 110 aaKnown RBP2.17□□□□□ -2.06
HMGB1P3-201ENST00000502802 LINC00305Q7Z4B0 112 aa2.17□□□□□ -2.06
HMGB1P3-201ENST00000502802 OR4B1Q8NGF8 309 aa2.17□□□□□ -2.06
HMGB1P3-201ENST00000502802 LINC00526Q96FQ7 95 aa2.17□□□□□ -2.06
HMGB1P3-201ENST00000502802 DPH3Q96FX2 82 aa2.17□□□□□ -2.06
HMGB1P3-201ENST00000502802 CARD19Q96LW7 228 aa2.17□□□□□ -2.06
HMGB1P3-201ENST00000502802 YPEL2Q96QA6 119 aa2.17□□□□□ -2.06
HMGB1P3-201ENST00000502802 SLC50A1Q9BRV3 221 aa2.17□□□□□ -2.06
HMGB1P3-201ENST00000502802 OTORQ9NRC9 128 aa2.17□□□□□ -2.06
HMGB1P3-201ENST00000502802 BIRC6Q9NR09 4857 aa2.17□□□□□ -2.06
HMGB1P3-201ENST00000502802 ZNF727A8MUV8 499 aa2.16□□□□□ -2.06
HMGB1P3-201ENST00000502802 H3BMG7 143 aa2.16□□□□□ -2.06
HMGB1P3-201ENST00000502802 CCDC179H3BU77 68 aa2.16□□□□□ -2.06
HMGB1P3-201ENST00000502802 NMBP08949 121 aa2.16□□□□□ -2.06
HMGB1P3-201ENST00000502802 ZNF705BP0CI00 300 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P3-201ENST00000502802 SAA2P0DJI9 122 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P3-201ENST00000502802 FABP4P15090 132 aa2.16□□□□□ -2.06
HMGB1P3-201ENST00000502802 ASIPP42127 132 aa2.16□□□□□ -2.06
HMGB1P3-201ENST00000502802 INSL3P51460 131 aa2.16□□□□□ -2.06
HMGB1P3-201ENST00000502802 RPL39P5Q59GN2 51 aa2.16□□□□□ -2.06
HMGB1P3-201ENST00000502802 Q6ZUT4 128 aa2.16□□□□□ -2.06
HMGB1P3-201ENST00000502802 FP248Q71RG6 208 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P3-201ENST00000502802 C6orf201Q7Z4U5 140 aa2.16□□□□□ -2.06
HMGB1P3-201ENST00000502802 FAM103A1Q9BTL3 118 aaKnown RBP2.16□□□□□ -2.06
HMGB1P3-201ENST00000502802 TRGV2A0A075B6R0 118 aa2.15□□□□□ -2.07
HMGB1P3-201ENST00000502802 TRBV27A0A0K0K1C4 114 aa2.15□□□□□ -2.07
HMGB1P3-201ENST00000502802 TMEM14DPA8MWL7 114 aa2.15□□□□□ -2.07
HMGB1P3-201ENST00000502802 K7EP34 96 aa2.15□□□□□ -2.07
HMGB1P3-201ENST00000502802 SSSCA1O60232 199 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms