RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 Q8N2B8 174 aa12.31□□□□□ -0.44
HMGXB3-201ENST00000502717 FAM19A1Q7Z5A9 133 aa12.31□□□□□ -0.44
HMGXB3-201ENST00000502717 NHLRC4P0CG21 123 aaPredicted RBP12.3□□□□□ -0.44
HMGXB3-201ENST00000502717 UBE2AP49459 152 aa12.3□□□□□ -0.44
HMGXB3-201ENST00000502717 KRTAP10-9P60411 292 aa12.3□□□□□ -0.44
HMGXB3-201ENST00000502717 IGLV5-45A0A087WSX0 123 aa12.3□□□□□ -0.44
HMGXB3-201ENST00000502717 NDUFS5O43920 106 aa12.29□□□□□ -0.44
HMGXB3-201ENST00000502717 C18orf65Q6ZTR6 163 aa12.29□□□□□ -0.44
HMGXB3-201ENST00000502717 ZNF73O43830 326 aaPredicted RBP12.28□□□□□ -0.44
HMGXB3-201ENST00000502717 BBC3Q96PG8 261 aaPredicted RBP12.28□□□□□ -0.44
HMGXB3-201ENST00000502717 AVPP01185 164 aa12.28□□□□□ -0.44
HMGXB3-201ENST00000502717 ODF3L2Q3SX64 289 aa12.28□□□□□ -0.44
HMGXB3-201ENST00000502717 IGLV4-60A0A075B6I1 120 aa12.27□□□□□ -0.44
HMGXB3-201ENST00000502717 C3orf84H3BNL1 204 aa12.27□□□□□ -0.44
HMGXB3-201ENST00000502717 Q8N3U1 123 aa12.27□□□□□ -0.44
HMGXB3-201ENST00000502717 SMR3AQ99954 134 aa12.27□□□□□ -0.44
HMGXB3-201ENST00000502717 M0R378 163 aa12.27□□□□□ -0.45
HMGXB3-201ENST00000502717 LY6G6CO95867 125 aa12.27□□□□□ -0.45
HMGXB3-201ENST00000502717 CHD9Q3L8U1 2897 aa12.26□□□□□ -0.45
HMGXB3-201ENST00000502717 C1orf158Q8N1D5 194 aa12.26□□□□□ -0.45
HMGXB3-201ENST00000502717 LITAFQ99732 161 aa12.26□□□□□ -0.45
HMGXB3-201ENST00000502717 LINC00482Q8N8I6 264 aa12.25□□□□□ -0.45
HMGXB3-201ENST00000502717 PRR3P79522 188 aaKnown RBP12.24□□□□□ -0.45
HMGXB3-201ENST00000502717 KLK9Q2XQG4 91 aa12.24□□□□□ -0.45
HMGXB3-201ENST00000502717 MRPL55Q7Z7F7 128 aaKnown RBP12.23□□□□□ -0.45
HMGXB3-201ENST00000502717 KIR2DL5BQ8NHK3 375 aa12.23□□□□□ -0.45
HMGXB3-201ENST00000502717 FAM218AQ96MZ4 157 aa12.23□□□□□ -0.45
HMGXB3-201ENST00000502717 PRRC2CQ9Y520 2896 aaKnown RBP12.23□□□□□ -0.45
HMGXB3-201ENST00000502717 SOSTDC1Q6X4U4 206 aa12.23□□□□□ -0.45
HMGXB3-201ENST00000502717 BCE1O60756 84 aa12.22□□□□□ -0.45
HMGXB3-201ENST00000502717 SPTSSBQ8NFR3 76 aa12.22□□□□□ -0.45
HMGXB3-201ENST00000502717 OXLD1Q5BKU9 147 aa12.22□□□□□ -0.45
HMGXB3-201ENST00000502717 Q6ZVQ6 151 aa12.22□□□□□ -0.45
HMGXB3-201ENST00000502717 PRO0628Q9UI54 55 aa12.22□□□□□ -0.45
HMGXB3-201ENST00000502717 CYSRT1A8MQ03 144 aa12.21□□□□□ -0.45
HMGXB3-201ENST00000502717 LINC01547P58512 204 aaPredicted RBP12.2□□□□□ -0.46
HMGXB3-201ENST00000502717 PCSK5Q92824 1860 aa12.2□□□□□ -0.46
HMGXB3-201ENST00000502717 PRYO14603 147 aa12.2□□□□□ -0.46
HMGXB3-201ENST00000502717 LINC00575Q6W349 94 aa12.2□□□□□ -0.46
HMGXB3-201ENST00000502717 C7orf33Q8WU49 177 aa12.2□□□□□ -0.46
HMGXB3-201ENST00000502717 UNQ6190/PRO20217Q6UXQ8 127 aa12.19□□□□□ -0.46
HMGXB3-201ENST00000502717 C11orf72Q8NBR9 251 aa12.19□□□□□ -0.46
HMGXB3-201ENST00000502717 WFDC10AQ9H1F0 79 aa12.19□□□□□ -0.46
HMGXB3-201ENST00000502717 DHRS4-AS1Q9P1J3 65 aa12.19□□□□□ -0.46
HMGXB3-201ENST00000502717 LELP1Q5T871 98 aa12.19□□□□□ -0.46
HMGXB3-201ENST00000502717 LINC01561Q8N1V8 128 aa12.19□□□□□ -0.46
HMGXB3-201ENST00000502717 NUPR2A6NF83 97 aa12.18□□□□□ -0.46
HMGXB3-201ENST00000502717 C9orf116Q5BN46 136 aaPredicted RBP12.18□□□□□ -0.46
HMGXB3-201ENST00000502717 CXCL6P80162 114 aa12.18□□□□□ -0.46
HMGXB3-201ENST00000502717 TMEM254Q8TBM7 123 aa12.17□□□□□ -0.46
HMGXB3-201ENST00000502717 FHL2Q14192 279 aa12.17□□□□□ -0.46
HMGXB3-201ENST00000502717 IGKV2-24A0A0C4DH68 120 aa12.17□□□□□ -0.46
HMGXB3-201ENST00000502717 SYCNQ0VAF6 134 aa12.17□□□□□ -0.46
HMGXB3-201ENST00000502717 A0A1B0GUV1 79 aa12.16□□□□□ -0.46
HMGXB3-201ENST00000502717 TRBV7-6A0A0J9YX20 115 aa12.16□□□□□ -0.46
HMGXB3-201ENST00000502717 H0Y9J4 135 aa12.16□□□□□ -0.46
HMGXB3-201ENST00000502717 C5orf42Q9H799 3197 aa12.16□□□□□ -0.46
HMGXB3-201ENST00000502717 SMCR5Q8TEV8 140 aa12.16□□□□□ -0.46
HMGXB3-201ENST00000502717 PKD1L2Q7Z442 2459 aa12.15□□□□□ -0.46
HMGXB3-201ENST00000502717 C4orf26Q17RF5 130 aa12.15□□□□□ -0.46
HMGXB3-201ENST00000502717 IGHV3OR16-9A0A0B4J2B5 98 aa12.15□□□□□ -0.46
HMGXB3-201ENST00000502717 FAM30AQ9NZY2 134 aa12.15□□□□□ -0.46
HMGXB3-201ENST00000502717 CHKB-CPT1BH3BT56 60 aa12.13□□□□□ -0.47
HMGXB3-201ENST00000502717 B9D2Q9BPU9 175 aa12.13□□□□□ -0.47
HMGXB3-201ENST00000502717 RANBP2P49792 3224 aaKnown RBP12.13□□□□□ -0.47
HMGXB3-201ENST00000502717 CELA1Q9UNI1 258 aa12.12□□□□□ -0.47
HMGXB3-201ENST00000502717 F8P00451 2351 aa12.12□□□□□ -0.47
HMGXB3-201ENST00000502717 IGKV2-28A0A075B6P5 120 aa12.12□□□□□ -0.47
HMGXB3-201ENST00000502717 IGKV2D-28P01615 120 aa12.12□□□□□ -0.47
HMGXB3-201ENST00000502717 WFDC10BQ8IUB3 73 aa12.11□□□□□ -0.47
HMGXB3-201ENST00000502717 PRR4Q16378 134 aa12.11□□□□□ -0.47
HMGXB3-201ENST00000502717 IGHV4-30-4P0DP06 118 aa12.1□□□□□ -0.47
HMGXB3-201ENST00000502717 HIGD2AQ9BW72 106 aa12.1□□□□□ -0.47
HMGXB3-201ENST00000502717 Q9UF83 564 aa12.1□□□□□ -0.47
HMGXB3-201ENST00000502717 M0R2N4 97 aa12.1□□□□□ -0.47
HMGXB3-201ENST00000502717 LRCOL1A6NCL2 159 aa12.1□□□□□ -0.47
HMGXB3-201ENST00000502717 EGFEM1PQ0D2K5 195 aa12.1□□□□□ -0.47
HMGXB3-201ENST00000502717 TRANK1O15050 2925 aa12.09□□□□□ -0.47
HMGXB3-201ENST00000502717 WFDC13Q8IUB5 93 aa12.08□□□□□ -0.48
HMGXB3-201ENST00000502717 KPRPQ5T749 579 aaPredicted RBP12.07□□□□□ -0.48
HMGXB3-201ENST00000502717 ESRGQ1W209 222 aa12.07□□□□□ -0.48
HMGXB3-201ENST00000502717 COL27A1Q8IZC6 1860 aaPredicted RBP12.06□□□□□ -0.48
HMGXB3-201ENST00000502717 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.05□□□□□ -0.48
HMGXB3-201ENST00000502717 A8MTW9 85 aa12.05□□□□□ -0.48
HMGXB3-201ENST00000502717 C16orf95Q9H693 158 aa12.05□□□□□ -0.48
HMGXB3-201ENST00000502717 IGLV1-51P01701 117 aa12.04□□□□□ -0.48
HMGXB3-201ENST00000502717 A6NED7 52 aa12.04□□□□□ -0.48
HMGXB3-201ENST00000502717 C1orf137Q5JT78 98 aa12.03□□□□□ -0.48
HMGXB3-201ENST00000502717 LINC01600Q96MT4 127 aa12.02□□□□□ -0.48
HMGXB3-201ENST00000502717 IGKV4-1P06312 121 aa12.02□□□□□ -0.48
HMGXB3-201ENST00000502717 A0A0J9YWU9 116 aa12.02□□□□□ -0.49
HMGXB3-201ENST00000502717 SPATA3Q8NHX4 192 aa12.02□□□□□ -0.49
HMGXB3-201ENST00000502717 ACANP16112 2415 aa12.01□□□□□ -0.49
HMGXB3-201ENST00000502717 LOC110117498A0A087WWA1 95 aa12.01□□□□□ -0.49
HMGXB3-201ENST00000502717 EIF4EBP3O60516 100 aaPredicted RBP12.01□□□□□ -0.49
HMGXB3-201ENST00000502717 Q6ZQT0 140 aa12.01□□□□□ -0.49
HMGXB3-201ENST00000502717 FSHBP01225 129 aa12□□□□□ -0.49
HMGXB3-201ENST00000502717 C6orf223Q8N319 242 aa12□□□□□ -0.49
HMGXB3-201ENST00000502717 A0A0C4DFX4 3053 aa12□□□□□ -0.49
HMGXB3-201ENST00000502717 PMAIP1Q13794 54 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms