RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 C6orf226Q5I0X4 101 aa9.28□□□□□ -0.92
USP11-212ENST00000497179 C10orf25Q5T742 122 aa9.28□□□□□ -0.92
USP11-212ENST00000497179 PET117Q6UWS5 81 aa9.28□□□□□ -0.92
USP11-212ENST00000497179 C2orf82Q6UX34 121 aa9.28□□□□□ -0.92
USP11-212ENST00000497179 UNQ6190/PRO20217Q6UXQ8 127 aa9.28□□□□□ -0.92
USP11-212ENST00000497179 FAM30AQ9NZY2 134 aa9.28□□□□□ -0.92
USP11-212ENST00000497179 PKIGQ9Y2B9 76 aa9.28□□□□□ -0.92
USP11-212ENST00000497179 TMEM223A0PJW6 202 aa9.27□□□□□ -0.93
USP11-212ENST00000497179 CXCL5P42830 114 aa9.27□□□□□ -0.93
USP11-212ENST00000497179 CKS1BP61024 79 aa9.27□□□□□ -0.93
USP11-212ENST00000497179 LINC01545Q5VT33 79 aa9.27□□□□□ -0.93
USP11-212ENST00000497179 PMCHL2Q9BQD1 86 aa9.27□□□□□ -0.93
USP11-212ENST00000497179 C6orf48Q9UBA6 75 aa9.27□□□□□ -0.93
USP11-212ENST00000497179 HSPG2P98160 4391 aa9.26□□□□□ -0.93
USP11-212ENST00000497179 TRBV30A0A0K0K1B3 111 aa9.26□□□□□ -0.93
USP11-212ENST00000497179 IGKCP01834 107 aa9.26□□□□□ -0.93
USP11-212ENST00000497179 S100A2P29034 98 aa9.26□□□□□ -0.93
USP11-212ENST00000497179 HIST1H2BLQ99880 126 aa9.26□□□□□ -0.93
USP11-212ENST00000497179 HERC2O95714 4834 aa9.25□□□□□ -0.93
USP11-212ENST00000497179 LOC107984640A0A0U1RRK4 108 aa9.25□□□□□ -0.93
USP11-212ENST00000497179 KRTDAPP60985 99 aa9.25□□□□□ -0.93
USP11-212ENST00000497179 SNRPEP62304 92 aaKnown RBP9.25□□□□□ -0.93
USP11-212ENST00000497179 C5orf52A6NGY3 159 aa9.24□□□□□ -0.93
USP11-212ENST00000497179 XGP55808 180 aa9.24□□□□□ -0.93
USP11-212ENST00000497179 CIRBPQ14011 172 aaKnown RBP9.24□□□□□ -0.93
USP11-212ENST00000497179 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.24□□□□□ -0.93
USP11-212ENST00000497179 A0A096LNI7 61 aa9.23□□□□□ -0.93
USP11-212ENST00000497179 PANO1I0J062 215 aa9.23□□□□□ -0.93
USP11-212ENST00000497179 TLX1NBP0CAT3 122 aa9.23□□□□□ -0.93
USP11-212ENST00000497179 CHTF8P0CG12 524 aa9.22□□□□□ -0.93
USP11-212ENST00000497179 SPACA4Q8TDM5 124 aa9.22□□□□□ -0.93
USP11-212ENST00000497179 IGKV2-24A0A0C4DH68 120 aa9.21□□□□□ -0.94
USP11-212ENST00000497179 C20orf202A1L168 122 aa9.21□□□□□ -0.94
USP11-212ENST00000497179 PTTG1IPP53801 180 aa9.21□□□□□ -0.94
USP11-212ENST00000497179 HERVK_113P61574 105 aa9.21□□□□□ -0.94
USP11-212ENST00000497179 SCXQ7RTU7 201 aa9.21□□□□□ -0.94
USP11-212ENST00000497179 LINC00474Q9P2X8 69 aa9.21□□□□□ -0.94
USP11-212ENST00000497179 HAMPP81172 84 aa9.2□□□□□ -0.94
USP11-212ENST00000497179 RPL18AQ02543 176 aaKnown RBP9.2□□□□□ -0.94
USP11-212ENST00000497179 C9orf116Q5BN46 136 aaPredicted RBP9.2□□□□□ -0.94
USP11-212ENST00000497179 SFTA2Q6UW10 78 aa9.2□□□□□ -0.94
USP11-212ENST00000497179 NDUFC2-KCTD14E9PQ53 114 aa9.19□□□□□ -0.94
USP11-212ENST00000497179 LEPROTO15243 131 aa9.19□□□□□ -0.94
USP11-212ENST00000497179 GAGE2BQ13066 116 aa9.19□□□□□ -0.94
USP11-212ENST00000497179 CIRBP-AS1Q8TBR5 109 aa9.19□□□□□ -0.94
USP11-212ENST00000497179 ZNF625Q96I27 306 aaPredicted RBP9.19□□□□□ -0.94
USP11-212ENST00000497179 MAJINQ3KP22 176 aa9.18□□□□□ -0.94
USP11-212ENST00000497179 Q6ZRP5 223 aa9.18□□□□□ -0.94
USP11-212ENST00000497179 PLEKHB2Q96CS7 222 aa9.18□□□□□ -0.94
USP11-212ENST00000497179 AKR1D1P51857 326 aa9.17□□□□□ -0.94
USP11-212ENST00000497179 TSPEAR-AS2P59090 65 aa9.17□□□□□ -0.94
USP11-212ENST00000497179 FAT1Q14517 4588 aa9.16□□□□□ -0.94
USP11-212ENST00000497179 A0A087WYN8 130 aa9.16□□□□□ -0.94
USP11-212ENST00000497179 E9PLD3 99 aa9.16□□□□□ -0.94
USP11-212ENST00000497179 PLAC8Q9NZF1 115 aa9.16□□□□□ -0.94
USP11-212ENST00000497179 J3QQQ9 107 aa9.15□□□□□ -0.94
USP11-212ENST00000497179 STPG4Q8N801 248 aa9.15□□□□□ -0.94
USP11-212ENST00000497179 NDUFA12Q9UI09 145 aa9.15□□□□□ -0.94
USP11-212ENST00000497179 TMA7Q9Y2S6 64 aaKnown RBP9.15□□□□□ -0.94
USP11-212ENST00000497179 GAGE2EQ4V326 116 aa9.14□□□□□ -0.95
USP11-212ENST00000497179 DPH3Q96FX2 82 aa9.14□□□□□ -0.95
USP11-212ENST00000497179 GAGE2DQ9UEU5 116 aa9.14□□□□□ -0.95
USP11-212ENST00000497179 ERG28Q9UKR5 140 aa9.14□□□□□ -0.95
USP11-212ENST00000497179 MYMXA0A1B0GTQ4 84 aa9.13□□□□□ -0.95
USP11-212ENST00000497179 EPM2AB3EWF7 344 aa9.13□□□□□ -0.95
USP11-212ENST00000497179 LGALS3P17931 250 aaKnown RBP9.13□□□□□ -0.95
USP11-212ENST00000497179 NMUP48645 174 aa9.13□□□□□ -0.95
USP11-212ENST00000497179 HERV-K104P63124 156 aa9.13□□□□□ -0.95
USP11-212ENST00000497179 COX17Q14061 63 aa9.13□□□□□ -0.95
USP11-212ENST00000497179 C9orf129Q5T035 196 aaKnown RBP9.12□□□□□ -0.95
USP11-212ENST00000497179 ATOH7Q8N100 152 aa9.12□□□□□ -0.95
USP11-212ENST00000497179 A0A1W2PNN7 141 aa9.11□□□□□ -0.95
USP11-212ENST00000497179 PFN2P35080 140 aa9.11□□□□□ -0.95
USP11-212ENST00000497179 VPS13BQ7Z7G8 4022 aa9.1□□□□□ -0.95
USP11-212ENST00000497179 IGKV2D-26A0A0A0MRZ7 120 aa9.1□□□□□ -0.95
USP11-212ENST00000497179 SMR3BP02814 79 aaPredicted RBP9.1□□□□□ -0.95
USP11-212ENST00000497179 Q8N1X5 172 aa9.1□□□□□ -0.95
USP11-212ENST00000497179 KRTAP17-1Q9BYP8 105 aa9.1□□□□□ -0.95
USP11-212ENST00000497179 XAGE1AQ9HD64 81 aa9.1□□□□□ -0.95
USP11-212ENST00000497179 FAM168BA1KXE4 195 aa9.09□□□□□ -0.95
USP11-212ENST00000497179 ANKRD39Q53RE8 183 aa9.09□□□□□ -0.95
USP11-212ENST00000497179 LINC00528Q8N1L1 170 aa9.09□□□□□ -0.95
USP11-212ENST00000497179 LINC00587B1AMM8 73 aa9.08□□□□□ -0.96
USP11-212ENST00000497179 SCGB1D1O95968 90 aa9.08□□□□□ -0.96
USP11-212ENST00000497179 SMIM13P0DJ93 91 aa9.08□□□□□ -0.96
USP11-212ENST00000497179 MEIG1Q5JSS6 88 aa9.08□□□□□ -0.96
USP11-212ENST00000497179 LINC00158P58513 81 aa9.07□□□□□ -0.96
USP11-212ENST00000497179 FAM19A5Q7Z5A7 132 aaPredicted RBP9.07□□□□□ -0.96
USP11-212ENST00000497179 KRTAP7-1Q8IUC3 87 aa9.07□□□□□ -0.96
USP11-212ENST00000497179 SND1-IT1Q9HBX3 110 aa9.07□□□□□ -0.96
USP11-212ENST00000497179 SRRM2Q9UQ35 2752 aaKnown RBP9.07□□□□□ -0.96
USP11-212ENST00000497179 PLA2G2DQ9UNK4 145 aa9.06□□□□□ -0.96
USP11-212ENST00000497179 A0A0J9YXY3 114 aa9.05□□□□□ -0.96
USP11-212ENST00000497179 A0A0U1RRA0 63 aa9.05□□□□□ -0.96
USP11-212ENST00000497179 ZNF815PA8K554 130 aa9.05□□□□□ -0.96
USP11-212ENST00000497179 HSBP1L1C9JCN9 74 aa9.05□□□□□ -0.96
USP11-212ENST00000497179 FAM229AH3BQW9 127 aa9.05□□□□□ -0.96
USP11-212ENST00000497179 SERTAD4-AS1Q5TG53 156 aa9.05□□□□□ -0.96
USP11-212ENST00000497179 Q5VSD8 79 aa9.05□□□□□ -0.96
USP11-212ENST00000497179 C7orf33Q8WU49 177 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms