RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 TLX1NBP0CAT3 122 aa12.19□□□□□ -0.46
CTDSP1-213ENST00000496785 IGLC3P0DOY3 106 aa12.19□□□□□ -0.46
CTDSP1-213ENST00000496785 RPL37AP61513 92 aaKnown RBP12.19□□□□□ -0.46
CTDSP1-213ENST00000496785 C6orf48Q9UBA6 75 aa12.19□□□□□ -0.46
CTDSP1-213ENST00000496785 SMIM1B2RUZ4 78 aa12.18□□□□□ -0.46
CTDSP1-213ENST00000496785 C10orf25Q5T742 122 aa12.18□□□□□ -0.46
CTDSP1-213ENST00000496785 C2orf82Q6UX34 121 aa12.17□□□□□ -0.46
CTDSP1-213ENST00000496785 IFI27L1Q96BM0 104 aa12.17□□□□□ -0.46
CTDSP1-213ENST00000496785 F8VRH5 84 aa12.15□□□□□ -0.46
CTDSP1-213ENST00000496785 COX7B2Q8TF08 81 aa12.15□□□□□ -0.46
CTDSP1-213ENST00000496785 TRAV12-1A0A0B4J245 112 aa12.14□□□□□ -0.47
CTDSP1-213ENST00000496785 NDUFC2-KCTD14E9PQ53 114 aa12.14□□□□□ -0.47
CTDSP1-213ENST00000496785 SCO1O75880 301 aa12.14□□□□□ -0.47
CTDSP1-213ENST00000496785 SERF1AO75920 110 aa12.14□□□□□ -0.47
CTDSP1-213ENST00000496785 CHTOPQ9Y3Y2 248 aaKnown RBP12.14□□□□□ -0.47
CTDSP1-213ENST00000496785 FAT1Q14517 4588 aa12.13□□□□□ -0.47
CTDSP1-213ENST00000496785 SPINK8P0C7L1 97 aa12.13□□□□□ -0.47
CTDSP1-213ENST00000496785 ZNF22P17026 224 aaPredicted RBP12.13□□□□□ -0.47
CTDSP1-213ENST00000496785 FAM19A2Q8N3H0 131 aa12.13□□□□□ -0.47
CTDSP1-213ENST00000496785 LEPROTL1O95214 131 aa12.12□□□□□ -0.47
CTDSP1-213ENST00000496785 Q6ZRP5 223 aa12.12□□□□□ -0.47
CTDSP1-213ENST00000496785 KRTAP10-4P60372 401 aaPredicted RBP12.1□□□□□ -0.47
CTDSP1-213ENST00000496785 GAGE2EQ4V326 116 aa12.1□□□□□ -0.47
CTDSP1-213ENST00000496785 C9orf116Q5BN46 136 aaPredicted RBP12.1□□□□□ -0.47
CTDSP1-213ENST00000496785 TMEM170BQ5T4T1 132 aa12.1□□□□□ -0.47
CTDSP1-213ENST00000496785 GAGE2DQ9UEU5 116 aa12.1□□□□□ -0.47
CTDSP1-213ENST00000496785 HSPB8Q9UJY1 196 aa12.1□□□□□ -0.47
CTDSP1-213ENST00000496785 VPS13BQ7Z7G8 4022 aa12.09□□□□□ -0.47
CTDSP1-213ENST00000496785 C11orf86A6NJI1 115 aa12.09□□□□□ -0.47
CTDSP1-213ENST00000496785 IGLV5-39A0A0G2JS06 123 aa12.08□□□□□ -0.48
CTDSP1-213ENST00000496785 S100A1P23297 94 aa12.08□□□□□ -0.48
CTDSP1-213ENST00000496785 LINC00310P59036 64 aa12.08□□□□□ -0.48
CTDSP1-213ENST00000496785 SFTA2Q6UW10 78 aa12.08□□□□□ -0.48
CTDSP1-213ENST00000496785 SRRM2Q9UQ35 2752 aaKnown RBP12.08□□□□□ -0.48
CTDSP1-213ENST00000496785 A0A1W2PNN7 141 aa12.06□□□□□ -0.48
CTDSP1-213ENST00000496785 HIST1H2BKO60814 126 aa12.05□□□□□ -0.48
CTDSP1-213ENST00000496785 HIST1H2BJP06899 126 aa12.05□□□□□ -0.48
CTDSP1-213ENST00000496785 HIST1H2BOP23527 126 aa12.05□□□□□ -0.48
CTDSP1-213ENST00000496785 HIST1H2BBP33778 126 aa12.05□□□□□ -0.48
CTDSP1-213ENST00000496785 HIST1H2BDP58876 126 aa12.05□□□□□ -0.48
CTDSP1-213ENST00000496785 HIST1H2BCP62807 126 aa12.05□□□□□ -0.48
CTDSP1-213ENST00000496785 HIST2H2BEQ16778 126 aa12.05□□□□□ -0.48
CTDSP1-213ENST00000496785 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.05□□□□□ -0.48
CTDSP1-213ENST00000496785 HIST1H2BHQ93079 126 aa12.05□□□□□ -0.48
CTDSP1-213ENST00000496785 HIST1H2BNQ99877 126 aa12.05□□□□□ -0.48
CTDSP1-213ENST00000496785 HIST1H2BMQ99879 126 aa12.05□□□□□ -0.48
CTDSP1-213ENST00000496785 H0Y8G0 127 aa12.03□□□□□ -0.48
CTDSP1-213ENST00000496785 FABP4P15090 132 aa12.03□□□□□ -0.48
CTDSP1-213ENST00000496785 NUPR1O60356 82 aa12.02□□□□□ -0.49
CTDSP1-213ENST00000496785 PRR3P79522 188 aaKnown RBP12.02□□□□□ -0.49
CTDSP1-213ENST00000496785 ODF1Q14990 250 aa12.02□□□□□ -0.49
CTDSP1-213ENST00000496785 FAM19A5Q7Z5A7 132 aaPredicted RBP12.02□□□□□ -0.49
CTDSP1-213ENST00000496785 PLNP26678 52 aa12.01□□□□□ -0.49
CTDSP1-213ENST00000496785 MAP1LC3CQ9BXW4 147 aa12.01□□□□□ -0.49
CTDSP1-213ENST00000496785 TMEM223A0PJW6 202 aa12□□□□□ -0.49
CTDSP1-213ENST00000496785 C9orf129Q5T035 196 aaKnown RBP12□□□□□ -0.49
CTDSP1-213ENST00000496785 FAM168BA1KXE4 195 aa11.99□□□□□ -0.49
CTDSP1-213ENST00000496785 M0QXV9 152 aa11.98□□□□□ -0.49
CTDSP1-213ENST00000496785 COX17Q14061 63 aa11.98□□□□□ -0.49
CTDSP1-213ENST00000496785 PHF5AQ7RTV0 110 aaKnown RBP11.98□□□□□ -0.49
CTDSP1-213ENST00000496785 XAGE1AQ9HD64 81 aa11.98□□□□□ -0.49
CTDSP1-213ENST00000496785 ATP6V1G1O75348 118 aa11.97□□□□□ -0.49
CTDSP1-213ENST00000496785 DPM2O94777 84 aa11.96□□□□□ -0.49
CTDSP1-213ENST00000496785 ERG28Q9UKR5 140 aa11.96□□□□□ -0.49
CTDSP1-213ENST00000496785 FLG2Q5D862 2391 aaPredicted RBP11.96□□□□□ -0.5
CTDSP1-213ENST00000496785 KRTAP29-1A8MX34 341 aaPredicted RBP11.95□□□□□ -0.5
CTDSP1-213ENST00000496785 OXTP01178 125 aa11.95□□□□□ -0.5
CTDSP1-213ENST00000496785 HERVK_113P61574 105 aa11.95□□□□□ -0.5
CTDSP1-213ENST00000496785 UBE2BP63146 152 aa11.95□□□□□ -0.5
CTDSP1-213ENST00000496785 J3QL48 77 aa11.94□□□□□ -0.5
CTDSP1-213ENST00000496785 PFN2P35080 140 aa11.94□□□□□ -0.5
CTDSP1-213ENST00000496785 HNRNPA3P51991 378 aaKnown RBP11.94□□□□□ -0.5
CTDSP1-213ENST00000496785 LBHQ53QV2 105 aaPredicted RBP11.94□□□□□ -0.5
CTDSP1-213ENST00000496785 COA6Q5JTJ3 125 aaKnown RBP11.94□□□□□ -0.5
CTDSP1-213ENST00000496785 IGKCP01834 107 aa11.93□□□□□ -0.5
CTDSP1-213ENST00000496785 ZNF625Q96I27 306 aaPredicted RBP11.93□□□□□ -0.5
CTDSP1-213ENST00000496785 TP73-AS1Q9UF72 201 aa11.93□□□□□ -0.5
CTDSP1-213ENST00000496785 PSORS1C2Q9UIG4 136 aa11.93□□□□□ -0.5
CTDSP1-213ENST00000496785 HERV-K104P63124 156 aa11.92□□□□□ -0.5
CTDSP1-213ENST00000496785 PLA2G2DQ9UNK4 145 aa11.92□□□□□ -0.5
CTDSP1-213ENST00000496785 LINC00587B1AMM8 73 aa11.91□□□□□ -0.5
CTDSP1-213ENST00000496785 SERTAD4-AS1Q5TG53 156 aa11.91□□□□□ -0.5
CTDSP1-213ENST00000496785 SPINK6Q6UWN8 80 aa11.91□□□□□ -0.5
CTDSP1-213ENST00000496785 KRTAP7-1Q8IUC3 87 aa11.91□□□□□ -0.5
CTDSP1-213ENST00000496785 PLEKHB2Q96CS7 222 aa11.91□□□□□ -0.5
CTDSP1-213ENST00000496785 C22orf24Q9Y442 160 aa11.91□□□□□ -0.5
CTDSP1-213ENST00000496785 SYS1-DBNDD2H3BUS1 97 aa11.9□□□□□ -0.5
CTDSP1-213ENST00000496785 C1orf137Q5JT78 98 aa11.9□□□□□ -0.5
CTDSP1-213ENST00000496785 MYMXA0A1B0GTQ4 84 aa11.89□□□□□ -0.51
CTDSP1-213ENST00000496785 PMCHL2Q9BQD1 86 aa11.89□□□□□ -0.51
CTDSP1-213ENST00000496785 LEPROTO15243 131 aa11.88□□□□□ -0.51
CTDSP1-213ENST00000496785 LINC00158P58513 81 aa11.88□□□□□ -0.51
CTDSP1-213ENST00000496785 PET117Q6UWS5 81 aa11.88□□□□□ -0.51
CTDSP1-213ENST00000496785 MRPL55Q7Z7F7 128 aaKnown RBP11.88□□□□□ -0.51
CTDSP1-213ENST00000496785 NKAPP1Q8N9T2 125 aa11.88□□□□□ -0.51
CTDSP1-213ENST00000496785 NDUFA12Q9UI09 145 aa11.88□□□□□ -0.51
CTDSP1-213ENST00000496785 IGLV5-37A0A075B6J1 123 aa11.87□□□□□ -0.51
CTDSP1-213ENST00000496785 MEIG1Q5JSS6 88 aa11.87□□□□□ -0.51
CTDSP1-213ENST00000496785 SND1-IT1Q9HBX3 110 aa11.87□□□□□ -0.51
CTDSP1-213ENST00000496785 RPL24P83731 157 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms