RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 F2Z2F3 143 aa4.38□□□□□ -1.71
GARNL3-219ENST00000495172 PAGE4O60829 102 aa4.38□□□□□ -1.71
GARNL3-219ENST00000495172 IFNA1P01562 189 aa4.38□□□□□ -1.71
GARNL3-219ENST00000495172 RAB5BP61020 215 aa4.38□□□□□ -1.71
GARNL3-219ENST00000495172 TRIQKQ629K1 86 aa4.38□□□□□ -1.71
GARNL3-219ENST00000495172 Q8N9P0 234 aaPredicted RBP4.38□□□□□ -1.71
GARNL3-219ENST00000495172 Q8NDZ9 215 aa4.38□□□□□ -1.71
GARNL3-219ENST00000495172 SMCR5Q8TEV8 140 aa4.38□□□□□ -1.71
GARNL3-219ENST00000495172 TRBV27A0A0K0K1C4 114 aa4.37□□□□□ -1.71
GARNL3-219ENST00000495172 RAB19A4D1S5 217 aa4.37□□□□□ -1.71
GARNL3-219ENST00000495172 PLA2G10O15496 165 aa4.37□□□□□ -1.71
GARNL3-219ENST00000495172 PRSS2P07478 247 aa4.37□□□□□ -1.71
GARNL3-219ENST00000495172 H2BFSP57053 126 aa4.37□□□□□ -1.71
GARNL3-219ENST00000495172 ZC2HC1BQ5TFG8 222 aa4.37□□□□□ -1.71
GARNL3-219ENST00000495172 NKX6-2Q9C056 277 aaPredicted RBP4.37□□□□□ -1.71
GARNL3-219ENST00000495172 CTXND1A0A1B0GTU2 59 aa4.36□□□□□ -1.71
GARNL3-219ENST00000495172 MPC2O95563 127 aa4.36□□□□□ -1.71
GARNL3-219ENST00000495172 LINC00483Q53H64 154 aa4.36□□□□□ -1.71
GARNL3-219ENST00000495172 C6orf226Q5I0X4 101 aa4.36□□□□□ -1.71
GARNL3-219ENST00000495172 C9orf62Q8N4C0 152 aa4.36□□□□□ -1.71
GARNL3-219ENST00000495172 ZNF706Q9Y5V0 76 aaPredicted RBP4.36□□□□□ -1.71
GARNL3-219ENST00000495172 A0A1B0GV50 99 aa4.35□□□□□ -1.71
GARNL3-219ENST00000495172 NOL3O60936 208 aaKnown RBP4.35□□□□□ -1.71
GARNL3-219ENST00000495172 RPL35P42766 123 aaKnown RBP4.35□□□□□ -1.71
GARNL3-219ENST00000495172 HBBP68871 147 aa4.35□□□□□ -1.71
GARNL3-219ENST00000495172 TMUB2Q71RG4 321 aa4.35□□□□□ -1.71
GARNL3-219ENST00000495172 SSBP3-AS1Q7Z2R9 100 aa4.35□□□□□ -1.71
GARNL3-219ENST00000495172 FAM19A3Q7Z5A8 133 aa4.35□□□□□ -1.71
GARNL3-219ENST00000495172 PSMG3Q9BT73 122 aaPredicted RBP4.35□□□□□ -1.71
GARNL3-219ENST00000495172 TNFSF18Q9UNG2 199 aa4.35□□□□□ -1.71
GARNL3-219ENST00000495172 MAP1LC3B2A6NCE7 125 aa4.34□□□□□ -1.71
GARNL3-219ENST00000495172 A6NN06 94 aa4.34□□□□□ -1.71
GARNL3-219ENST00000495172 MBP02144 154 aa4.34□□□□□ -1.71
GARNL3-219ENST00000495172 GIPP09681 153 aaPredicted RBP4.34□□□□□ -1.71
GARNL3-219ENST00000495172 ALKBH7Q9BT30 221 aaPredicted RBP4.34□□□□□ -1.71
GARNL3-219ENST00000495172 TIMM21Q9BVV7 248 aa4.34□□□□□ -1.71
GARNL3-219ENST00000495172 MAP1LC3BQ9GZQ8 125 aa4.34□□□□□ -1.71
GARNL3-219ENST00000495172 NDUFA13Q9P0J0 144 aa4.34□□□□□ -1.71
GARNL3-219ENST00000495172 CENPXA8MT69 81 aa4.33□□□□□ -1.72
GARNL3-219ENST00000495172 F8VRH5 84 aa4.33□□□□□ -1.72
GARNL3-219ENST00000495172 ERC2-IT1O76042 136 aa4.33□□□□□ -1.72
GARNL3-219ENST00000495172 VPREB1P12018 145 aa4.33□□□□□ -1.72
GARNL3-219ENST00000495172 CENPWQ5EE01 88 aa4.33□□□□□ -1.72
GARNL3-219ENST00000495172 C9orf153Q5TBE3 101 aa4.33□□□□□ -1.72
GARNL3-219ENST00000495172 TEX261Q6UWH6 196 aa4.33□□□□□ -1.72
GARNL3-219ENST00000495172 FAM231DQ6ZW35 169 aa4.33□□□□□ -1.72
GARNL3-219ENST00000495172 LINC01551Q86U37 167 aa4.33□□□□□ -1.72
GARNL3-219ENST00000495172 CNFNQ9BYD5 112 aa4.33□□□□□ -1.72
GARNL3-219ENST00000495172 GEMIN7Q9H840 131 aaKnown RBP4.33□□□□□ -1.72
GARNL3-219ENST00000495172 BATF3Q9NR55 127 aa4.33□□□□□ -1.72
GARNL3-219ENST00000495172 IL7P13232 177 aa4.32□□□□□ -1.72
GARNL3-219ENST00000495172 SERF2P84101 59 aa4.32□□□□□ -1.72
GARNL3-219ENST00000495172 VCYO14598 125 aa4.31□□□□□ -1.72
GARNL3-219ENST00000495172 LYRM1O43325 122 aa4.31□□□□□ -1.72
GARNL3-219ENST00000495172 TRIAP1O43715 76 aa4.31□□□□□ -1.72
GARNL3-219ENST00000495172 S100A9P06702 114 aaKnown RBP4.31□□□□□ -1.72
GARNL3-219ENST00000495172 AKAP14Q86UN6 197 aa4.31□□□□□ -1.72
GARNL3-219ENST00000495172 Q8IZM0 81 aa4.31□□□□□ -1.72
GARNL3-219ENST00000495172 CNPY1Q3B7I2 92 aa4.3□□□□□ -1.72
GARNL3-219ENST00000495172 SMIM15Q7Z3B0 74 aa4.3□□□□□ -1.72
GARNL3-219ENST00000495172 TCEAL7Q9BRU2 100 aa4.3□□□□□ -1.72
GARNL3-219ENST00000495172 XKRY2A2RUG3 117 aa4.29□□□□□ -1.72
GARNL3-219ENST00000495172 H7C2G1 150 aa4.29□□□□□ -1.72
GARNL3-219ENST00000495172 RAB14P61106 215 aa4.29□□□□□ -1.72
GARNL3-219ENST00000495172 MRPS36P82909 103 aaKnown RBP4.29□□□□□ -1.72
GARNL3-219ENST00000495172 SMAGPQ0VAQ4 97 aa4.29□□□□□ -1.72
GARNL3-219ENST00000495172 RPL7L1Q6DKI1 246 aaKnown RBP4.29□□□□□ -1.72
GARNL3-219ENST00000495172 Q6ZN92 141 aa4.29□□□□□ -1.72
GARNL3-219ENST00000495172 AMN1Q8IY45 258 aa4.29□□□□□ -1.72
GARNL3-219ENST00000495172 NRACQ8N912 160 aa4.29□□□□□ -1.72
GARNL3-219ENST00000495172 FAM210AQ96ND0 272 aa4.29□□□□□ -1.72
GARNL3-219ENST00000495172 SPRR2FQ96RM1 72 aa4.29□□□□□ -1.72
GARNL3-219ENST00000495172 TRBV20OR9-2A0A075B6H5 130 aa4.28□□□□□ -1.72
GARNL3-219ENST00000495172 RAB4AP20338 218 aa4.28□□□□□ -1.72
GARNL3-219ENST00000495172 S100A5P33763 92 aa4.28□□□□□ -1.72
GARNL3-219ENST00000495172 IGLV4-3A0A075B6K6 122 aa4.27□□□□□ -1.73
GARNL3-219ENST00000495172 FAM236DA0A1B0GTK5 79 aa4.27□□□□□ -1.73
GARNL3-219ENST00000495172 FAM236CP0DP71 79 aa4.27□□□□□ -1.73
GARNL3-219ENST00000495172 RAB5AP20339 215 aa4.27□□□□□ -1.73
GARNL3-219ENST00000495172 SUMO2P61956 95 aaKnown RBP4.27□□□□□ -1.73
GARNL3-219ENST00000495172 SPANXA1Q9NS26 97 aa4.27□□□□□ -1.73
GARNL3-219ENST00000495172 SPRR2DP22532 72 aa4.26□□□□□ -1.73
GARNL3-219ENST00000495172 TMEM18Q96B42 140 aa4.26□□□□□ -1.73
GARNL3-219ENST00000495172 A8MWL6 223 aa4.25□□□□□ -1.73
GARNL3-219ENST00000495172 TCAPO15273 167 aa4.25□□□□□ -1.73
GARNL3-219ENST00000495172 PFN2P35080 140 aa4.25□□□□□ -1.73
GARNL3-219ENST00000495172 DSTQ03001 7570 aaKnown RBP4.25□□□□□ -1.73
GARNL3-219ENST00000495172 C1orf195Q5TG92 126 aa4.25□□□□□ -1.73
GARNL3-219ENST00000495172 ATP11AUNQ6ZP68 121 aa4.25□□□□□ -1.73
GARNL3-219ENST00000495172 LINC01561Q8N1V8 128 aa4.25□□□□□ -1.73
GARNL3-219ENST00000495172 LIMD2Q9BT23 127 aa4.25□□□□□ -1.73
GARNL3-219ENST00000495172 CDKN2A-AS1Q9UH64 79 aa4.25□□□□□ -1.73
GARNL3-219ENST00000495172 PFDN1O60925 122 aa4.24□□□□□ -1.73
GARNL3-219ENST00000495172 PET100P0DJ07 73 aa4.24□□□□□ -1.73
GARNL3-219ENST00000495172 AKR1C8PQ5T2L2 129 aa4.24□□□□□ -1.73
GARNL3-219ENST00000495172 LCE1AQ5T7P2 110 aa4.24□□□□□ -1.73
GARNL3-219ENST00000495172 LINC00299Q6ZSB3 139 aa4.24□□□□□ -1.73
GARNL3-219ENST00000495172 SND1-IT1Q9HBX3 110 aa4.24□□□□□ -1.73
GARNL3-219ENST00000495172 GNG4P50150 75 aa4.23□□□□□ -1.73
GARNL3-219ENST00000495172 TMEM191AQ9H0A3 160 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 184.9 ms