RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 LINC00518Q8N0U6 118 aa11.05□□□□□ -0.64
SNX17-209ENST00000494893 C9orf163Q8N9P6 203 aa11.05□□□□□ -0.64
SNX17-209ENST00000494893 PCLOQ9Y6V0 5065 aa11.04□□□□□ -0.64
SNX17-209ENST00000494893 A0A087WZ39 114 aa11.04□□□□□ -0.64
SNX17-209ENST00000494893 GVQW2A0A096LPI5 108 aaPredicted RBP11.04□□□□□ -0.64
SNX17-209ENST00000494893 S100A12P80511 92 aa11.04□□□□□ -0.64
SNX17-209ENST00000494893 C12orf57Q99622 126 aa11.04□□□□□ -0.64
SNX17-209ENST00000494893 HERVK_113P61574 105 aa11.03□□□□□ -0.64
SNX17-209ENST00000494893 ANKRD39Q53RE8 183 aa11.03□□□□□ -0.64
SNX17-209ENST00000494893 C5orf38Q86SI9 138 aa11.03□□□□□ -0.64
SNX17-209ENST00000494893 PAM16Q9Y3D7 125 aa11.03□□□□□ -0.64
SNX17-209ENST00000494893 CFAP161Q6P656 301 aa11.02□□□□□ -0.65
SNX17-209ENST00000494893 LINC01561Q8N1V8 128 aa11.02□□□□□ -0.65
SNX17-209ENST00000494893 E9PLD3 99 aa11.01□□□□□ -0.65
SNX17-209ENST00000494893 COX7A2LO14548 114 aa11.01□□□□□ -0.65
SNX17-209ENST00000494893 SMR3BP02814 79 aaPredicted RBP11.01□□□□□ -0.65
SNX17-209ENST00000494893 SPINK8P0C7L1 97 aa11.01□□□□□ -0.65
SNX17-209ENST00000494893 SPATA45Q537H7 98 aa11.01□□□□□ -0.65
SNX17-209ENST00000494893 SDIM1Q6ZPB5 146 aa11.01□□□□□ -0.65
SNX17-209ENST00000494893 VPS13BQ7Z7G8 4022 aa11□□□□□ -0.65
SNX17-209ENST00000494893 IGHV1-58A0A0C4DH39 117 aa11□□□□□ -0.65
SNX17-209ENST00000494893 SMIM1B2RUZ4 78 aa11□□□□□ -0.65
SNX17-209ENST00000494893 PANO1I0J062 215 aa11□□□□□ -0.65
SNX17-209ENST00000494893 LINC00526Q96FQ7 95 aa11□□□□□ -0.65
SNX17-209ENST00000494893 IGLV5-39A0A0G2JS06 123 aa10.99□□□□□ -0.65
SNX17-209ENST00000494893 SCXQ7RTU7 201 aa10.99□□□□□ -0.65
SNX17-209ENST00000494893 IGHV3-64A0A075B6Q5 118 aa10.98□□□□□ -0.65
SNX17-209ENST00000494893 IGKV2D-26A0A0A0MRZ7 120 aa10.98□□□□□ -0.65
SNX17-209ENST00000494893 LEPROTO15243 131 aa10.98□□□□□ -0.65
SNX17-209ENST00000494893 PLEKHB2Q96CS7 222 aa10.98□□□□□ -0.65
SNX17-209ENST00000494893 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.98□□□□□ -0.65
SNX17-209ENST00000494893 MALP21145 153 aa10.97□□□□□ -0.65
SNX17-209ENST00000494893 CIRBP-AS1Q8TBR5 109 aa10.97□□□□□ -0.65
SNX17-209ENST00000494893 APOMO95445 188 aa10.96□□□□□ -0.65
SNX17-209ENST00000494893 NMUP48645 174 aa10.96□□□□□ -0.65
SNX17-209ENST00000494893 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.95□□□□□ -0.66
SNX17-209ENST00000494893 J3QQQ9 107 aa10.95□□□□□ -0.66
SNX17-209ENST00000494893 TSPEAR-AS2P59090 65 aa10.94□□□□□ -0.66
SNX17-209ENST00000494893 Q5VSD8 79 aa10.94□□□□□ -0.66
SNX17-209ENST00000494893 CHTF8P0CG12 524 aa10.93□□□□□ -0.66
SNX17-209ENST00000494893 COX8AP10176 69 aa10.93□□□□□ -0.66
SNX17-209ENST00000494893 LGALS3P17931 250 aaKnown RBP10.93□□□□□ -0.66
SNX17-209ENST00000494893 CIRBPQ14011 172 aaKnown RBP10.93□□□□□ -0.66
SNX17-209ENST00000494893 PCP2Q8IVA1 136 aa10.93□□□□□ -0.66
SNX17-209ENST00000494893 COX7B2Q8TF08 81 aa10.93□□□□□ -0.66
SNX17-209ENST00000494893 ORAOV1Q8WV07 137 aa10.93□□□□□ -0.66
SNX17-209ENST00000494893 C14orf144Q96I85 54 aa10.93□□□□□ -0.66
SNX17-209ENST00000494893 EPM2AB3EWF7 344 aa10.92□□□□□ -0.66
SNX17-209ENST00000494893 ZNF561-AS1K7EIQ3 104 aa10.91□□□□□ -0.66
SNX17-209ENST00000494893 Q8IZM0 81 aa10.91□□□□□ -0.66
SNX17-209ENST00000494893 TTTY13Q9BZ97 58 aa10.91□□□□□ -0.66
SNX17-209ENST00000494893 TOMM7Q9P0U1 55 aa10.91□□□□□ -0.66
SNX17-209ENST00000494893 SRRM2Q9UQ35 2752 aaKnown RBP10.9□□□□□ -0.66
SNX17-209ENST00000494893 DLEU1O43261 78 aa10.9□□□□□ -0.66
SNX17-209ENST00000494893 PRSS2P07478 247 aa10.9□□□□□ -0.66
SNX17-209ENST00000494893 SYCNQ0VAF6 134 aa10.9□□□□□ -0.66
SNX17-209ENST00000494893 KIAA0087Q14695 138 aa10.9□□□□□ -0.66
SNX17-209ENST00000494893 Q6ZRU5 148 aa10.9□□□□□ -0.66
SNX17-209ENST00000494893 BOD1L2Q8IYS8 172 aa10.9□□□□□ -0.66
SNX17-209ENST00000494893 CARD19Q96LW7 228 aa10.9□□□□□ -0.66
SNX17-209ENST00000494893 PRO1933Q9H354 126 aa10.9□□□□□ -0.66
SNX17-209ENST00000494893 MYMXA0A1B0GTQ4 84 aa10.89□□□□□ -0.67
SNX17-209ENST00000494893 SPAG11BQ08648 103 aa10.89□□□□□ -0.67
SNX17-209ENST00000494893 C6orf226Q5I0X4 101 aa10.89□□□□□ -0.67
SNX17-209ENST00000494893 LINC00528Q8N1L1 170 aa10.89□□□□□ -0.67
SNX17-209ENST00000494893 SPACA4Q8TDM5 124 aa10.89□□□□□ -0.67
SNX17-209ENST00000494893 NDUFA12Q9UI09 145 aa10.89□□□□□ -0.67
SNX17-209ENST00000494893 ZNF815PA8K554 130 aa10.88□□□□□ -0.67
SNX17-209ENST00000494893 NDUFA1O15239 70 aa10.88□□□□□ -0.67
SNX17-209ENST00000494893 SLC25A34Q6PIV7 304 aa10.88□□□□□ -0.67
SNX17-209ENST00000494893 C2orf48Q96LS8 159 aa10.88□□□□□ -0.67
SNX17-209ENST00000494893 UQCR10Q9UDW1 63 aa10.88□□□□□ -0.67
SNX17-209ENST00000494893 A0A096LNI7 61 aa10.87□□□□□ -0.67
SNX17-209ENST00000494893 TSTD3H0UI37 97 aa10.87□□□□□ -0.67
SNX17-209ENST00000494893 ZNF625Q96I27 306 aaPredicted RBP10.87□□□□□ -0.67
SNX17-209ENST00000494893 FAM229AH3BQW9 127 aa10.86□□□□□ -0.67
SNX17-209ENST00000494893 CXCL5P42830 114 aa10.86□□□□□ -0.67
SNX17-209ENST00000494893 KRTAP10-4P60372 401 aaPredicted RBP10.86□□□□□ -0.67
SNX17-209ENST00000494893 CAMK2N2Q96S95 79 aa10.86□□□□□ -0.67
SNX17-209ENST00000494893 A0A087WYN8 130 aa10.85□□□□□ -0.67
SNX17-209ENST00000494893 CKS1BP61024 79 aa10.85□□□□□ -0.67
SNX17-209ENST00000494893 C10orf25Q5T742 122 aa10.85□□□□□ -0.67
SNX17-209ENST00000494893 SFTA2Q6UW10 78 aa10.85□□□□□ -0.67
SNX17-209ENST00000494893 MIEN1Q9BRT3 115 aa10.85□□□□□ -0.67
SNX17-209ENST00000494893 TP73-AS1Q9UF72 201 aa10.85□□□□□ -0.67
SNX17-209ENST00000494893 IGKV2-24A0A0C4DH68 120 aa10.84□□□□□ -0.67
SNX17-209ENST00000494893 F8WDY8 70 aa10.84□□□□□ -0.67
SNX17-209ENST00000494893 HERV-K104P63124 156 aa10.84□□□□□ -0.67
SNX17-209ENST00000494893 C2orf82Q6UX34 121 aa10.83□□□□□ -0.68
SNX17-209ENST00000494893 PLAC8Q9NZF1 115 aa10.83□□□□□ -0.68
SNX17-209ENST00000494893 A0A0J9YXY3 114 aa10.82□□□□□ -0.68
SNX17-209ENST00000494893 UNQ6190/PRO20217Q6UXQ8 127 aa10.82□□□□□ -0.68
SNX17-209ENST00000494893 SCGB1D4Q6XE38 83 aa10.81□□□□□ -0.68
SNX17-209ENST00000494893 C2orf91Q6ZV80 131 aa10.81□□□□□ -0.68
SNX17-209ENST00000494893 INAFM2P0DMQ5 153 aa10.8□□□□□ -0.68
SNX17-209ENST00000494893 RNF151Q2KHN1 245 aa10.8□□□□□ -0.68
SNX17-209ENST00000494893 HIGD1BQ9P298 99 aa10.8□□□□□ -0.68
SNX17-209ENST00000494893 C6orf48Q9UBA6 75 aa10.8□□□□□ -0.68
SNX17-209ENST00000494893 LOC107984640A0A0U1RRK4 108 aa10.79□□□□□ -0.68
SNX17-209ENST00000494893 PTTG1IPP53801 180 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms