RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 UBE2L6O14933 153 aa12.94□□□□□ -0.34
TSPAN4-212ENST00000494815 DEFB121Q5J5C9 76 aa12.94□□□□□ -0.34
TSPAN4-212ENST00000494815 PAX4O43316 350 aa12.93□□□□□ -0.34
TSPAN4-212ENST00000494815 FAM240AA0A1B0GVK7 77 aa12.93□□□□□ -0.34
TSPAN4-212ENST00000494815 DNAH3Q8TD57 4116 aa12.92□□□□□ -0.34
TSPAN4-212ENST00000494815 NDUFA1O15239 70 aa12.9□□□□□ -0.34
TSPAN4-212ENST00000494815 TMEM101Q96IK0 257 aa12.9□□□□□ -0.34
TSPAN4-212ENST00000494815 CDC42SE2Q9NRR3 84 aa12.9□□□□□ -0.34
TSPAN4-212ENST00000494815 IGLV5-45A0A087WSX0 123 aa12.89□□□□□ -0.35
TSPAN4-212ENST00000494815 TIRAPP58753 221 aa12.89□□□□□ -0.35
TSPAN4-212ENST00000494815 RETNQ9HD89 108 aa12.88□□□□□ -0.35
TSPAN4-212ENST00000494815 CDKN2A-AS1Q9UH64 79 aa12.88□□□□□ -0.35
TSPAN4-212ENST00000494815 C11orf68Q9H3H3 251 aaKnown RBP12.88□□□□□ -0.35
TSPAN4-212ENST00000494815 FAM19A3Q7Z5A8 133 aa12.87□□□□□ -0.35
TSPAN4-212ENST00000494815 DAND5Q8N907 189 aa12.87□□□□□ -0.35
TSPAN4-212ENST00000494815 NOTCH1P46531 2555 aa12.87□□□□□ -0.35
TSPAN4-212ENST00000494815 CIRBPQ14011 172 aaKnown RBP12.87□□□□□ -0.35
TSPAN4-212ENST00000494815 CHCHD5Q9BSY4 110 aa12.87□□□□□ -0.35
TSPAN4-212ENST00000494815 F5H768 121 aa12.86□□□□□ -0.35
TSPAN4-212ENST00000494815 LOC107984640A0A0U1RRK4 108 aa12.86□□□□□ -0.35
TSPAN4-212ENST00000494815 HERVK_113P63121 156 aa12.85□□□□□ -0.35
TSPAN4-212ENST00000494815 LINC00242Q5T6M2 205 aa12.84□□□□□ -0.35
TSPAN4-212ENST00000494815 LINC00308Q8TCZ7 52 aa12.84□□□□□ -0.35
TSPAN4-212ENST00000494815 IGLV5-39A0A0G2JS06 123 aa12.83□□□□□ -0.36
TSPAN4-212ENST00000494815 TRBV7-7A0A0K0K1E9 115 aa12.83□□□□□ -0.36
TSPAN4-212ENST00000494815 HTN3P15516 51 aa12.83□□□□□ -0.36
TSPAN4-212ENST00000494815 MDFIQ99750 246 aa12.83□□□□□ -0.36
TSPAN4-212ENST00000494815 NBEAL1Q6ZS30 2694 aa12.82□□□□□ -0.36
TSPAN4-212ENST00000494815 TRAV13-1A0A0B4J241 112 aa12.82□□□□□ -0.36
TSPAN4-212ENST00000494815 COX6A2Q02221 97 aa12.82□□□□□ -0.36
TSPAN4-212ENST00000494815 KPRPQ5T749 579 aaPredicted RBP12.82□□□□□ -0.36
TSPAN4-212ENST00000494815 Q9H8V8 135 aa12.82□□□□□ -0.36
TSPAN4-212ENST00000494815 COX7A2LO14548 114 aa12.81□□□□□ -0.36
TSPAN4-212ENST00000494815 A0A096LPF7 62 aa12.81□□□□□ -0.36
TSPAN4-212ENST00000494815 COPS9Q8WXC6 57 aa12.81□□□□□ -0.36
TSPAN4-212ENST00000494815 A0A1B0GUV1 79 aa12.8□□□□□ -0.36
TSPAN4-212ENST00000494815 ACYP1P07311 99 aa12.8□□□□□ -0.36
TSPAN4-212ENST00000494815 FAM19A5Q7Z5A7 132 aaPredicted RBP12.8□□□□□ -0.36
TSPAN4-212ENST00000494815 IGLV4-60A0A075B6I1 120 aa12.8□□□□□ -0.36
TSPAN4-212ENST00000494815 MGAM2Q2M2H8 2515 aa12.79□□□□□ -0.36
TSPAN4-212ENST00000494815 J3KT08 172 aa12.79□□□□□ -0.36
TSPAN4-212ENST00000494815 H3BNG1 76 aa12.78□□□□□ -0.36
TSPAN4-212ENST00000494815 K7EIL1 84 aa12.78□□□□□ -0.36
TSPAN4-212ENST00000494815 A0A1B0GX51 115 aa12.77□□□□□ -0.37
TSPAN4-212ENST00000494815 PRB2P02812 416 aaPredicted RBP12.77□□□□□ -0.37
TSPAN4-212ENST00000494815 SOSTDC1Q6X4U4 206 aa12.77□□□□□ -0.37
TSPAN4-212ENST00000494815 ZNF625Q96I27 306 aaPredicted RBP12.77□□□□□ -0.37
TSPAN4-212ENST00000494815 A0A0J9YWU9 116 aa12.76□□□□□ -0.37
TSPAN4-212ENST00000494815 SMIM1B2RUZ4 78 aa12.76□□□□□ -0.37
TSPAN4-212ENST00000494815 TM2D3Q9BRN9 247 aa12.76□□□□□ -0.37
TSPAN4-212ENST00000494815 IMUPQ9GZP8 106 aa12.76□□□□□ -0.37
TSPAN4-212ENST00000494815 C9orf153Q5TBE3 101 aa12.75□□□□□ -0.37
TSPAN4-212ENST00000494815 Q6ZTC4 211 aa12.75□□□□□ -0.37
TSPAN4-212ENST00000494815 A0A0U1RRA0 63 aa12.74□□□□□ -0.37
TSPAN4-212ENST00000494815 TRACP01848 142 aa12.74□□□□□ -0.37
TSPAN4-212ENST00000494815 C3orf22Q8N5N4 141 aa12.74□□□□□ -0.37
TSPAN4-212ENST00000494815 LELP1Q5T871 98 aa12.74□□□□□ -0.37
TSPAN4-212ENST00000494815 TENM3Q9P273 2699 aa12.74□□□□□ -0.37
TSPAN4-212ENST00000494815 C11orf45Q8TAV5 145 aa12.73□□□□□ -0.37
TSPAN4-212ENST00000494815 FAM236AA0A1B0GUQ0 79 aa12.72□□□□□ -0.37
TSPAN4-212ENST00000494815 FAM236BA0A1B0GV22 79 aa12.72□□□□□ -0.37
TSPAN4-212ENST00000494815 IGKV3OR2-268A0A0C4DH90 116 aa12.71□□□□□ -0.37
TSPAN4-212ENST00000494815 KLK5Q9Y337 293 aaPredicted RBP12.71□□□□□ -0.37
TSPAN4-212ENST00000494815 LINC00959A0A1B0GUT2 108 aa12.7□□□□□ -0.38
TSPAN4-212ENST00000494815 LINC00643Q86TS7 51 aa12.7□□□□□ -0.38
TSPAN4-212ENST00000494815 SMCR5Q8TEV8 140 aa12.7□□□□□ -0.38
TSPAN4-212ENST00000494815 OR13C6PQ8NH95 151 aa12.7□□□□□ -0.38
TSPAN4-212ENST00000494815 LINC00526Q96FQ7 95 aa12.7□□□□□ -0.38
TSPAN4-212ENST00000494815 IGHV3OR16-9A0A0B4J2B5 98 aa12.69□□□□□ -0.38
TSPAN4-212ENST00000494815 UQCRQO14949 82 aa12.69□□□□□ -0.38
TSPAN4-212ENST00000494815 BAALC-AS2P0C853 105 aa12.69□□□□□ -0.38
TSPAN4-212ENST00000494815 NANOS2P60321 138 aaKnown RBP12.69□□□□□ -0.38
TSPAN4-212ENST00000494815 RPS28P62857 69 aaKnown RBP12.69□□□□□ -0.38
TSPAN4-212ENST00000494815 SDIM1Q6ZPB5 146 aa12.69□□□□□ -0.38
TSPAN4-212ENST00000494815 LYPD5Q6UWN5 251 aa12.68□□□□□ -0.38
TSPAN4-212ENST00000494815 SS18Q15532 418 aa12.67□□□□□ -0.38
TSPAN4-212ENST00000494815 KRTAP21-3Q3LHN1 58 aa12.67□□□□□ -0.38
TSPAN4-212ENST00000494815 MRAPQ8TCY5 172 aa12.67□□□□□ -0.38
TSPAN4-212ENST00000494815 C22orf24Q9Y442 160 aa12.67□□□□□ -0.38
TSPAN4-212ENST00000494815 DEFB131BA0A096LNP1 70 aa12.67□□□□□ -0.38
TSPAN4-212ENST00000494815 FAM218AQ96MZ4 157 aa12.67□□□□□ -0.38
TSPAN4-212ENST00000494815 A0A087WZ39 114 aa12.66□□□□□ -0.38
TSPAN4-212ENST00000494815 LINC00269Q8N2A0 174 aa12.65□□□□□ -0.38
TSPAN4-212ENST00000494815 TRAV13-2A0A0B4J235 113 aa12.64□□□□□ -0.39
TSPAN4-212ENST00000494815 ANGP03950 147 aaKnown RBP12.64□□□□□ -0.39
TSPAN4-212ENST00000494815 INAFM2P0DMQ5 153 aa12.64□□□□□ -0.39
TSPAN4-212ENST00000494815 RPL28P46779 137 aaKnown RBP12.64□□□□□ -0.39
TSPAN4-212ENST00000494815 REG3AQ06141 175 aa12.63□□□□□ -0.39
TSPAN4-212ENST00000494815 Q8N3U1 123 aa12.63□□□□□ -0.39
TSPAN4-212ENST00000494815 CRPP02741 224 aa12.62□□□□□ -0.39
TSPAN4-212ENST00000494815 CXCL5P42830 114 aa12.62□□□□□ -0.39
TSPAN4-212ENST00000494815 CLPSL2Q6UWE3 100 aa12.62□□□□□ -0.39
TSPAN4-212ENST00000494815 XCL1P47992 114 aa12.62□□□□□ -0.39
TSPAN4-212ENST00000494815 LINC01561Q8N1V8 128 aa12.62□□□□□ -0.39
TSPAN4-212ENST00000494815 HUWE1Q7Z6Z7 4374 aaKnown RBP12.61□□□□□ -0.39
TSPAN4-212ENST00000494815 TRAV10A0A0B4J240 114 aa12.61□□□□□ -0.39
TSPAN4-212ENST00000494815 MALP21145 153 aa12.61□□□□□ -0.39
TSPAN4-212ENST00000494815 COX7B2Q8TF08 81 aa12.6□□□□□ -0.39
TSPAN4-212ENST00000494815 CD164L2Q6UWJ8 174 aa12.6□□□□□ -0.39
TSPAN4-212ENST00000494815 C5orf38Q86SI9 138 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms