RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 A8MZ25 164 aa8.1□□□□□ -1.11
RFC4-214ENST00000494047 GAGE7O76087 117 aa8.1□□□□□ -1.11
RFC4-214ENST00000494047 GAGE12FP0CL80 117 aa8.1□□□□□ -1.11
RFC4-214ENST00000494047 GAGE12GP0CL81 117 aa8.1□□□□□ -1.11
RFC4-214ENST00000494047 GAGE12IP0CL82 117 aa8.1□□□□□ -1.11
RFC4-214ENST00000494047 COX17Q14061 63 aa8.1□□□□□ -1.11
RFC4-214ENST00000494047 CHCHD5Q9BSY4 110 aa8.1□□□□□ -1.11
RFC4-214ENST00000494047 SND1-IT1Q9HBX3 110 aa8.1□□□□□ -1.11
RFC4-214ENST00000494047 WNK1Q9H4A3 2382 aa8.1□□□□□ -1.11
RFC4-214ENST00000494047 FHL2Q14192 279 aa8.1□□□□□ -1.11
RFC4-214ENST00000494047 Q8IZM0 81 aa8.1□□□□□ -1.11
RFC4-214ENST00000494047 C19orf73Q9NVV2 129 aa8.1□□□□□ -1.11
RFC4-214ENST00000494047 H3BQ85 93 aa8.09□□□□□ -1.12
RFC4-214ENST00000494047 PRM2P04554 102 aa8.09□□□□□ -1.12
RFC4-214ENST00000494047 GIG44P09565 113 aaPredicted RBP8.09□□□□□ -1.12
RFC4-214ENST00000494047 MIR7-3HGQ8N6C7 128 aa8.09□□□□□ -1.12
RFC4-214ENST00000494047 BAALC-AS2P0C853 105 aa8.08□□□□□ -1.12
RFC4-214ENST00000494047 LINC00158P58513 81 aa8.08□□□□□ -1.12
RFC4-214ENST00000494047 SOSTDC1Q6X4U4 206 aa8.08□□□□□ -1.12
RFC4-214ENST00000494047 PRO0255Q9UI72 69 aa8.08□□□□□ -1.12
RFC4-214ENST00000494047 TRRAPQ9Y4A5 3859 aa8.08□□□□□ -1.12
RFC4-214ENST00000494047 NDUFC2O95298 119 aa8.07□□□□□ -1.12
RFC4-214ENST00000494047 MALP21145 153 aa8.07□□□□□ -1.12
RFC4-214ENST00000494047 SDIM1Q6ZPB5 146 aa8.07□□□□□ -1.12
RFC4-214ENST00000494047 S100A7L2Q5SY68 101 aa8.06□□□□□ -1.12
RFC4-214ENST00000494047 LINC00959A0A1B0GUT2 108 aa8.05□□□□□ -1.12
RFC4-214ENST00000494047 RPL35AP18077 110 aaKnown RBP8.05□□□□□ -1.12
RFC4-214ENST00000494047 KRTAP10-3P60369 221 aa8.05□□□□□ -1.12
RFC4-214ENST00000494047 C6orf226Q5I0X4 101 aa8.05□□□□□ -1.12
RFC4-214ENST00000494047 TOMM7Q9P0U1 55 aa8.05□□□□□ -1.12
RFC4-214ENST00000494047 GHRHP01286 108 aa8.04□□□□□ -1.12
RFC4-214ENST00000494047 APOC4P55056 127 aa8.04□□□□□ -1.12
RFC4-214ENST00000494047 C9orf66Q5T8R8 295 aa8.04□□□□□ -1.12
RFC4-214ENST00000494047 JMJD7-PLA2G4BH0Y9G9 81 aa8.03□□□□□ -1.12
RFC4-214ENST00000494047 CFAP161Q6P656 301 aa8.03□□□□□ -1.12
RFC4-214ENST00000494047 PKD1L1Q8TDX9 2849 aa8.02□□□□□ -1.13
RFC4-214ENST00000494047 A0A0U1RRA0 63 aa8.02□□□□□ -1.13
RFC4-214ENST00000494047 GYPEP15421 78 aa8.02□□□□□ -1.13
RFC4-214ENST00000494047 CCL18P55774 89 aa8.02□□□□□ -1.13
RFC4-214ENST00000494047 CD164L2Q6UWJ8 174 aa8.02□□□□□ -1.13
RFC4-214ENST00000494047 TMEM126AQ9H061 195 aa8.02□□□□□ -1.13
RFC4-214ENST00000494047 IGHV4-28A0A0C4DH34 117 aa8.01□□□□□ -1.13
RFC4-214ENST00000494047 PAX4O43316 350 aa8.01□□□□□ -1.13
RFC4-214ENST00000494047 ATP5EP2Q5VTU8 51 aa8.01□□□□□ -1.13
RFC4-214ENST00000494047 LINC00337Q8N6G1 96 aa8.01□□□□□ -1.13
RFC4-214ENST00000494047 OBSCN-AS1Q96MR7 158 aa8.01□□□□□ -1.13
RFC4-214ENST00000494047 ORMDL1Q9P0S3 153 aa8.01□□□□□ -1.13
RFC4-214ENST00000494047 IGLV4-60A0A075B6I1 120 aa8□□□□□ -1.13
RFC4-214ENST00000494047 IGKV2-28A0A075B6P5 120 aa8□□□□□ -1.13
RFC4-214ENST00000494047 IGKV2D-28P01615 120 aa8□□□□□ -1.13
RFC4-214ENST00000494047 LINC00482Q8N8I6 264 aa8□□□□□ -1.13
RFC4-214ENST00000494047 SMIM11BQ8TCY0 68 aa8□□□□□ -1.13
RFC4-214ENST00000494047 TMEM256-PLSCR3K7ERE1 68 aa7.99□□□□□ -1.13
RFC4-214ENST00000494047 LCE2DQ5TA82 110 aaPredicted RBP7.99□□□□□ -1.13
RFC4-214ENST00000494047 LOC100131303A0A0U1RQF7 123 aa7.98□□□□□ -1.13
RFC4-214ENST00000494047 ATOX1O00244 68 aa7.98□□□□□ -1.13
RFC4-214ENST00000494047 NHLRC4P0CG21 123 aaPredicted RBP7.98□□□□□ -1.13
RFC4-214ENST00000494047 MIFP14174 115 aa7.98□□□□□ -1.13
RFC4-214ENST00000494047 LINC00167Q96N53 147 aa7.98□□□□□ -1.13
RFC4-214ENST00000494047 NOTCH3Q9UM47 2321 aa7.98□□□□□ -1.13
RFC4-214ENST00000494047 DEFB130BP0DP73 79 aa7.97□□□□□ -1.13
RFC4-214ENST00000494047 DEFB130AP0DP74 79 aa7.97□□□□□ -1.13
RFC4-214ENST00000494047 Q6JHZ5 121 aa7.97□□□□□ -1.13
RFC4-214ENST00000494047 KLK5Q9Y337 293 aaPredicted RBP7.97□□□□□ -1.13
RFC4-214ENST00000494047 CMYA5Q8N3K9 4069 aa7.97□□□□□ -1.13
RFC4-214ENST00000494047 UQCRQO14949 82 aa7.97□□□□□ -1.13
RFC4-214ENST00000494047 GAGE2AQ6NT46 116 aa7.97□□□□□ -1.13
RFC4-214ENST00000494047 C5orf38Q86SI9 138 aa7.97□□□□□ -1.13
RFC4-214ENST00000494047 OR13C6PQ8NH95 151 aa7.97□□□□□ -1.13
RFC4-214ENST00000494047 FAM218AQ96MZ4 157 aa7.97□□□□□ -1.13
RFC4-214ENST00000494047 X6R8D5 127 aa7.97□□□□□ -1.13
RFC4-214ENST00000494047 NOTCH1P46531 2555 aa7.96□□□□□ -1.13
RFC4-214ENST00000494047 IGKV3OR2-268A0A0C4DH90 116 aa7.96□□□□□ -1.14
RFC4-214ENST00000494047 FAM236AA0A1B0GUQ0 79 aa7.96□□□□□ -1.14
RFC4-214ENST00000494047 FAM236BA0A1B0GV22 79 aa7.96□□□□□ -1.14
RFC4-214ENST00000494047 WFDC10AQ9H1F0 79 aa7.96□□□□□ -1.14
RFC4-214ENST00000494047 VWFP04275 2813 aa7.96□□□□□ -1.14
RFC4-214ENST00000494047 PDE6GP18545 87 aa7.95□□□□□ -1.14
RFC4-214ENST00000494047 PFN2P35080 140 aa7.95□□□□□ -1.14
RFC4-214ENST00000494047 XCL1P47992 114 aa7.95□□□□□ -1.14
RFC4-214ENST00000494047 WFDC9Q8NEX5 89 aa7.95□□□□□ -1.14
RFC4-214ENST00000494047 B5MCH6 92 aa7.94□□□□□ -1.14
RFC4-214ENST00000494047 LECT2O14960 151 aa7.94□□□□□ -1.14
RFC4-214ENST00000494047 DAD1P61803 113 aa7.94□□□□□ -1.14
RFC4-214ENST00000494047 LELP1Q5T871 98 aa7.94□□□□□ -1.14
RFC4-214ENST00000494047 GVQW2A0A096LPI5 108 aaPredicted RBP7.93□□□□□ -1.14
RFC4-214ENST00000494047 REG3AQ06141 175 aa7.93□□□□□ -1.14
RFC4-214ENST00000494047 A0A087WYN8 130 aa7.92□□□□□ -1.14
RFC4-214ENST00000494047 TRBV10-3A0A0K0K1G6 114 aa7.92□□□□□ -1.14
RFC4-214ENST00000494047 F8WDY8 70 aa7.92□□□□□ -1.14
RFC4-214ENST00000494047 SPART-AS1P0CW21 52 aa7.92□□□□□ -1.14
RFC4-214ENST00000494047 CHCHD10Q8WYQ3 142 aaPredicted RBP7.92□□□□□ -1.14
RFC4-214ENST00000494047 A0A0J9YWU9 116 aa7.91□□□□□ -1.14
RFC4-214ENST00000494047 H3BNG1 76 aa7.91□□□□□ -1.14
RFC4-214ENST00000494047 CCKP06307 115 aa7.91□□□□□ -1.14
RFC4-214ENST00000494047 IGHV4-30-4P0DP06 118 aa7.91□□□□□ -1.14
RFC4-214ENST00000494047 HIST1H4AP62805 103 aaKnown RBP7.91□□□□□ -1.14
RFC4-214ENST00000494047 KPRPQ5T749 579 aaPredicted RBP7.91□□□□□ -1.14
RFC4-214ENST00000494047 C3orf22Q8N5N4 141 aa7.91□□□□□ -1.14
RFC4-214ENST00000494047 Q9HAA7 133 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms