RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 SDIM1Q6ZPB5 146 aa11.16□□□□□ -0.62
SEMA4D-220ENST00000492386 SS18Q15532 418 aa11.15□□□□□ -0.62
SEMA4D-220ENST00000492386 PRO0255Q9UI72 69 aa11.15□□□□□ -0.62
SEMA4D-220ENST00000492386 CCDC179H3BU77 68 aa11.14□□□□□ -0.63
SEMA4D-220ENST00000492386 PAX4O43316 350 aa11.14□□□□□ -0.63
SEMA4D-220ENST00000492386 SMIM9A6NGZ8 99 aa11.14□□□□□ -0.63
SEMA4D-220ENST00000492386 H0YGX0 51 aa11.14□□□□□ -0.63
SEMA4D-220ENST00000492386 CLPSL2Q6UWE3 100 aa11.14□□□□□ -0.63
SEMA4D-220ENST00000492386 Q8IZM0 81 aa11.14□□□□□ -0.63
SEMA4D-220ENST00000492386 SMR3AQ99954 134 aa11.14□□□□□ -0.63
SEMA4D-220ENST00000492386 NBEAL2Q6ZNJ1 2754 aa11.14□□□□□ -0.63
SEMA4D-220ENST00000492386 A0A096LPF7 62 aa11.13□□□□□ -0.63
SEMA4D-220ENST00000492386 INAFM2P0DMQ5 153 aa11.13□□□□□ -0.63
SEMA4D-220ENST00000492386 UNC79Q9P2D8 2635 aa11.13□□□□□ -0.63
SEMA4D-220ENST00000492386 B5MCH6 92 aa11.13□□□□□ -0.63
SEMA4D-220ENST00000492386 LINC00643Q86TS7 51 aa11.12□□□□□ -0.63
SEMA4D-220ENST00000492386 LY6G6DO95868 133 aa11.12□□□□□ -0.63
SEMA4D-220ENST00000492386 DNAL4O96015 105 aa11.12□□□□□ -0.63
SEMA4D-220ENST00000492386 ATP5G1P05496 136 aa11.11□□□□□ -0.63
SEMA4D-220ENST00000492386 LINC01561Q8N1V8 128 aa11.11□□□□□ -0.63
SEMA4D-220ENST00000492386 SPATA3Q8NHX4 192 aa11.11□□□□□ -0.63
SEMA4D-220ENST00000492386 IMUPQ9GZP8 106 aa11.11□□□□□ -0.63
SEMA4D-220ENST00000492386 C9orf129Q5T035 196 aaKnown RBP11.11□□□□□ -0.63
SEMA4D-220ENST00000492386 OR13C6PQ8NH95 151 aa11.11□□□□□ -0.63
SEMA4D-220ENST00000492386 VWFP04275 2813 aa11.11□□□□□ -0.63
SEMA4D-220ENST00000492386 HIVEP2P31629 2446 aa11.1□□□□□ -0.63
SEMA4D-220ENST00000492386 GAGE2AQ6NT46 116 aa11.1□□□□□ -0.63
SEMA4D-220ENST00000492386 LYRM9A8MSI8 78 aa11.09□□□□□ -0.63
SEMA4D-220ENST00000492386 LECT2O14960 151 aa11.09□□□□□ -0.63
SEMA4D-220ENST00000492386 OBSCN-AS1Q96MR7 158 aa11.09□□□□□ -0.63
SEMA4D-220ENST00000492386 SS18L2Q9UHA2 77 aa11.09□□□□□ -0.63
SEMA4D-220ENST00000492386 KIAA0087Q14695 138 aa11.08□□□□□ -0.64
SEMA4D-220ENST00000492386 LINC00269Q8N2A0 174 aa11.08□□□□□ -0.64
SEMA4D-220ENST00000492386 HELZ2Q9BYK8 2649 aaKnown RBP11.08□□□□□ -0.64
SEMA4D-220ENST00000492386 DEFB4AO15263 64 aa11.07□□□□□ -0.64
SEMA4D-220ENST00000492386 Q8N3U1 123 aa11.07□□□□□ -0.64
SEMA4D-220ENST00000492386 CD164L2Q6UWJ8 174 aa11.06□□□□□ -0.64
SEMA4D-220ENST00000492386 FAM236AA0A1B0GUQ0 79 aa11.06□□□□□ -0.64
SEMA4D-220ENST00000492386 FAM236BA0A1B0GV22 79 aa11.06□□□□□ -0.64
SEMA4D-220ENST00000492386 DEFB135Q30KP9 77 aa11.06□□□□□ -0.64
SEMA4D-220ENST00000492386 FASNP49327 2511 aaKnown RBP11.06□□□□□ -0.64
SEMA4D-220ENST00000492386 CHCHD10Q8WYQ3 142 aaPredicted RBP11.05□□□□□ -0.64
SEMA4D-220ENST00000492386 C14orf132Q9NPU4 83 aa11.05□□□□□ -0.64
SEMA4D-220ENST00000492386 J3QKU1 62 aa11.05□□□□□ -0.64
SEMA4D-220ENST00000492386 NANOS2P60321 138 aaKnown RBP11.05□□□□□ -0.64
SEMA4D-220ENST00000492386 SLPIP03973 132 aa11.04□□□□□ -0.64
SEMA4D-220ENST00000492386 PRR3P79522 188 aaKnown RBP11.04□□□□□ -0.64
SEMA4D-220ENST00000492386 C9orf66Q5T8R8 295 aa11.04□□□□□ -0.64
SEMA4D-220ENST00000492386 IGLV10-54A0A075B6I4 117 aa11.03□□□□□ -0.64
SEMA4D-220ENST00000492386 IGHV4-28A0A0C4DH34 117 aa11.03□□□□□ -0.64
SEMA4D-220ENST00000492386 REG3AQ06141 175 aa11.03□□□□□ -0.64
SEMA4D-220ENST00000492386 ANGP03950 147 aaKnown RBP11.03□□□□□ -0.64
SEMA4D-220ENST00000492386 COX17Q14061 63 aa11.03□□□□□ -0.64
SEMA4D-220ENST00000492386 KLK5Q9Y337 293 aaPredicted RBP11.03□□□□□ -0.64
SEMA4D-220ENST00000492386 CXCL5P42830 114 aa11.02□□□□□ -0.65
SEMA4D-220ENST00000492386 CFAP161Q6P656 301 aa11.02□□□□□ -0.65
SEMA4D-220ENST00000492386 NDUFC2O95298 119 aa11.02□□□□□ -0.65
SEMA4D-220ENST00000492386 NCR3O14931 201 aa11.01□□□□□ -0.65
SEMA4D-220ENST00000492386 LINC00167Q96N53 147 aa11.01□□□□□ -0.65
SEMA4D-220ENST00000492386 DAD1P61803 113 aa11.01□□□□□ -0.65
SEMA4D-220ENST00000492386 C9orf116Q5BN46 136 aaPredicted RBP11.01□□□□□ -0.65
SEMA4D-220ENST00000492386 ORMDL1Q9P0S3 153 aa11.01□□□□□ -0.65
SEMA4D-220ENST00000492386 CELA1Q9UNI1 258 aa11.01□□□□□ -0.65
SEMA4D-220ENST00000492386 APOC4P55056 127 aa10.99□□□□□ -0.65
SEMA4D-220ENST00000492386 TENM1Q9UKZ4 2725 aa10.99□□□□□ -0.65
SEMA4D-220ENST00000492386 Q8NAQ8 132 aa10.98□□□□□ -0.65
SEMA4D-220ENST00000492386 Q8NDZ9 215 aa10.98□□□□□ -0.65
SEMA4D-220ENST00000492386 Q8N814 137 aa10.98□□□□□ -0.65
SEMA4D-220ENST00000492386 A0A1B0GX51 115 aa10.97□□□□□ -0.65
SEMA4D-220ENST00000492386 TMEM126AQ9H061 195 aa10.97□□□□□ -0.65
SEMA4D-220ENST00000492386 LINC00846Q9NV44 126 aa10.97□□□□□ -0.65
SEMA4D-220ENST00000492386 KMT2BQ9UMN6 2715 aaPredicted RBP10.97□□□□□ -0.65
SEMA4D-220ENST00000492386 MIFP14174 115 aa10.95□□□□□ -0.66
SEMA4D-220ENST00000492386 C10orf25Q5T742 122 aa10.94□□□□□ -0.66
SEMA4D-220ENST00000492386 C6orf223Q8N319 242 aa10.94□□□□□ -0.66
SEMA4D-220ENST00000492386 HIST1H4AP62805 103 aaKnown RBP10.94□□□□□ -0.66
SEMA4D-220ENST00000492386 LELP1Q5T871 98 aa10.94□□□□□ -0.66
SEMA4D-220ENST00000492386 NSD1Q96L73 2696 aaPredicted RBP10.93□□□□□ -0.66
SEMA4D-220ENST00000492386 INAFM1C9JVW0 142 aa10.93□□□□□ -0.66
SEMA4D-220ENST00000492386 Q6JHZ5 121 aa10.93□□□□□ -0.66
SEMA4D-220ENST00000492386 UNQ6190/PRO20217Q6UXQ8 127 aa10.93□□□□□ -0.66
SEMA4D-220ENST00000492386 NOTCH2Q04721 2471 aa10.93□□□□□ -0.66
SEMA4D-220ENST00000492386 CCKP06307 115 aa10.92□□□□□ -0.66
SEMA4D-220ENST00000492386 SPART-AS1P0CW21 52 aa10.92□□□□□ -0.66
SEMA4D-220ENST00000492386 HTN3P15516 51 aa10.92□□□□□ -0.66
SEMA4D-220ENST00000492386 SPAG11BQ08648 103 aa10.92□□□□□ -0.66
SEMA4D-220ENST00000492386 C6orf99Q4VX62 202 aa10.92□□□□□ -0.66
SEMA4D-220ENST00000492386 OTOGQ6ZRI0 2925 aa10.92□□□□□ -0.66
SEMA4D-220ENST00000492386 PRR34Q9NV39 138 aa10.91□□□□□ -0.66
SEMA4D-220ENST00000492386 LINC00526Q96FQ7 95 aa10.91□□□□□ -0.66
SEMA4D-220ENST00000492386 IGKV3D-7A0A0C4DH55 119 aa10.9□□□□□ -0.66
SEMA4D-220ENST00000492386 TMEM256-PLSCR3K7ERE1 68 aa10.9□□□□□ -0.66
SEMA4D-220ENST00000492386 C3orf22Q8N5N4 141 aa10.9□□□□□ -0.66
SEMA4D-220ENST00000492386 A0A0J9YWU9 116 aa10.9□□□□□ -0.66
SEMA4D-220ENST00000492386 JMJD7-PLA2G4BH0Y9G9 81 aa10.9□□□□□ -0.66
SEMA4D-220ENST00000492386 IGHV4-30-4P0DP06 118 aa10.9□□□□□ -0.66
SEMA4D-220ENST00000492386 CYSRT1A8MQ03 144 aa10.89□□□□□ -0.67
SEMA4D-220ENST00000492386 C3orf56Q8N813 242 aa10.89□□□□□ -0.67
SEMA4D-220ENST00000492386 KLK12Q9UKR0 248 aa10.89□□□□□ -0.67
SEMA4D-220ENST00000492386 HECTD1Q9ULT8 2610 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms