RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 RNASE13Q5GAN3 156 aaKnown RBP6.55□□□□□ -1.36
BRCA1-219ENST00000491747 ZNF415Q09FC8 603 aa6.54□□□□□ -1.36
BRCA1-219ENST00000491747 DAZ2Q13117 558 aaKnown RBP6.54□□□□□ -1.36
BRCA1-219ENST00000491747 Q6ZTI0 123 aa6.54□□□□□ -1.36
BRCA1-219ENST00000491747 FAM240AA0A1B0GVK7 77 aa6.54□□□□□ -1.36
BRCA1-219ENST00000491747 LST1O00453 97 aa6.54□□□□□ -1.36
BRCA1-219ENST00000491747 GAGE7O76087 117 aa6.54□□□□□ -1.36
BRCA1-219ENST00000491747 GAGE12FP0CL80 117 aa6.54□□□□□ -1.36
BRCA1-219ENST00000491747 GAGE12GP0CL81 117 aa6.54□□□□□ -1.36
BRCA1-219ENST00000491747 GAGE12IP0CL82 117 aa6.54□□□□□ -1.36
BRCA1-219ENST00000491747 CIRBPQ14011 172 aaKnown RBP6.54□□□□□ -1.36
BRCA1-219ENST00000491747 MRPL23Q16540 153 aaKnown RBP6.54□□□□□ -1.36
BRCA1-219ENST00000491747 C15orf53Q8NAA6 179 aa6.54□□□□□ -1.36
BRCA1-219ENST00000491747 CHCHD7Q9BUK0 85 aa6.54□□□□□ -1.36
BRCA1-219ENST00000491747 KMT2AQ03164 3969 aa6.53□□□□□ -1.36
BRCA1-219ENST00000491747 DNAJC30Q96LL9 226 aa6.53□□□□□ -1.36
BRCA1-219ENST00000491747 NPC2P61916 151 aa6.53□□□□□ -1.36
BRCA1-219ENST00000491747 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-219ENST00000491747 IGKV2-29A2NJV5 120 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-219ENST00000491747 GAGE12JA6NER3 117 aa6.52□□□□□ -1.37
BRCA1-219ENST00000491747 F5H768 121 aa6.52□□□□□ -1.37
BRCA1-219ENST00000491747 NDUFA1O15239 70 aa6.52□□□□□ -1.37
BRCA1-219ENST00000491747 ATP5G1P05496 136 aa6.52□□□□□ -1.37
BRCA1-219ENST00000491747 GAGE4Q13068 117 aa6.52□□□□□ -1.37
BRCA1-219ENST00000491747 CLEC2BQ92478 149 aa6.52□□□□□ -1.37
BRCA1-219ENST00000491747 B5MCH6 92 aa6.52□□□□□ -1.37
BRCA1-219ENST00000491747 TIRAPP58753 221 aa6.52□□□□□ -1.37
BRCA1-219ENST00000491747 COPS9Q8WXC6 57 aa6.52□□□□□ -1.37
BRCA1-219ENST00000491747 IGLV5-45A0A087WSX0 123 aa6.51□□□□□ -1.37
BRCA1-219ENST00000491747 TRGV1A0A0A0MS02 117 aa6.51□□□□□ -1.37
BRCA1-219ENST00000491747 IGHV3-53P01767 116 aa6.51□□□□□ -1.37
BRCA1-219ENST00000491747 DGAT2L7PQ6IED9 249 aa6.51□□□□□ -1.37
BRCA1-219ENST00000491747 CDKN2A-AS1Q9UH64 79 aa6.51□□□□□ -1.37
BRCA1-219ENST00000491747 SS18L2Q9UHA2 77 aa6.51□□□□□ -1.37
BRCA1-219ENST00000491747 HERVK_113P63121 156 aa6.5□□□□□ -1.37
BRCA1-219ENST00000491747 Q6ZSN1 163 aa6.5□□□□□ -1.37
BRCA1-219ENST00000491747 TMEM101Q96IK0 257 aa6.5□□□□□ -1.37
BRCA1-219ENST00000491747 Q9UF83 564 aa6.5□□□□□ -1.37
BRCA1-219ENST00000491747 DNAH6Q9C0G6 4158 aa6.5□□□□□ -1.37
BRCA1-219ENST00000491747 NACAE9PAV3 2078 aa6.5□□□□□ -1.37
BRCA1-219ENST00000491747 DAND5Q8N907 189 aa6.5□□□□□ -1.37
BRCA1-219ENST00000491747 TRGV2A0A075B6R0 118 aa6.49□□□□□ -1.37
BRCA1-219ENST00000491747 IGHV3-38A0A0C4DH36 116 aa6.49□□□□□ -1.37
BRCA1-219ENST00000491747 ACYP1P07311 99 aa6.49□□□□□ -1.37
BRCA1-219ENST00000491747 LINC00308Q8TCZ7 52 aa6.49□□□□□ -1.37
BRCA1-219ENST00000491747 Q9H8V8 135 aa6.49□□□□□ -1.37
BRCA1-219ENST00000491747 COX7A2LO14548 114 aa6.48□□□□□ -1.37
BRCA1-219ENST00000491747 IGLV5-39A0A0G2JS06 123 aa6.47□□□□□ -1.37
BRCA1-219ENST00000491747 TRBV7-7A0A0K0K1E9 115 aa6.47□□□□□ -1.37
BRCA1-219ENST00000491747 CCDC179H3BU77 68 aa6.47□□□□□ -1.37
BRCA1-219ENST00000491747 RS1O15537 224 aa6.47□□□□□ -1.37
BRCA1-219ENST00000491747 FHL2Q14192 279 aa6.47□□□□□ -1.37
BRCA1-219ENST00000491747 LINC00242Q5T6M2 205 aa6.46□□□□□ -1.37
BRCA1-219ENST00000491747 COX6A2Q02221 97 aa6.46□□□□□ -1.38
BRCA1-219ENST00000491747 CSDC2Q9Y534 153 aaKnown RBP6.46□□□□□ -1.38
BRCA1-219ENST00000491747 MEIG1Q5JSS6 88 aa6.45□□□□□ -1.38
BRCA1-219ENST00000491747 FAM19A3Q7Z5A8 133 aa6.45□□□□□ -1.38
BRCA1-219ENST00000491747 ZNF625Q96I27 306 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-219ENST00000491747 IMUPQ9GZP8 106 aa6.45□□□□□ -1.38
BRCA1-219ENST00000491747 SMIM1B2RUZ4 78 aa6.45□□□□□ -1.38
BRCA1-219ENST00000491747 HERV-K104P63124 156 aa6.45□□□□□ -1.38
BRCA1-219ENST00000491747 DNAH10Q8IVF4 4471 aa6.45□□□□□ -1.38
BRCA1-219ENST00000491747 A0A096LPF7 62 aa6.44□□□□□ -1.38
BRCA1-219ENST00000491747 A0A0U1RRA0 63 aa6.44□□□□□ -1.38
BRCA1-219ENST00000491747 H3BNG1 76 aa6.44□□□□□ -1.38
BRCA1-219ENST00000491747 TRACP01848 142 aa6.44□□□□□ -1.38
BRCA1-219ENST00000491747 RPL36AP83881 106 aaKnown RBP6.44□□□□□ -1.38
BRCA1-219ENST00000491747 UBE2DNLQ8IWF7 75 aa6.44□□□□□ -1.38
BRCA1-219ENST00000491747 RPL36ALQ969Q0 106 aaKnown RBP6.44□□□□□ -1.38
BRCA1-219ENST00000491747 PPDPFQ9H3Y8 114 aa6.44□□□□□ -1.38
BRCA1-219ENST00000491747 LINC00588Q9Y4M8 146 aa6.44□□□□□ -1.38
BRCA1-219ENST00000491747 FRAS1Q86XX4 4008 aa6.44□□□□□ -1.38
BRCA1-219ENST00000491747 TRBV10-1A0A0K0K1A3 114 aa6.44□□□□□ -1.38
BRCA1-219ENST00000491747 DAZ4Q86SG3 579 aaKnown RBP6.44□□□□□ -1.38
BRCA1-219ENST00000491747 DAZ3Q9NR90 486 aaKnown RBP6.44□□□□□ -1.38
BRCA1-219ENST00000491747 DNAH2Q9P225 4427 aa6.43□□□□□ -1.38
BRCA1-219ENST00000491747 EPPK1P58107 5090 aaKnown RBP6.43□□□□□ -1.38
BRCA1-219ENST00000491747 TRAV13-1A0A0B4J241 112 aa6.43□□□□□ -1.38
BRCA1-219ENST00000491747 M0R2N4 97 aa6.43□□□□□ -1.38
BRCA1-219ENST00000491747 PAX4O43316 350 aa6.43□□□□□ -1.38
BRCA1-219ENST00000491747 ESRGQ1W209 222 aa6.43□□□□□ -1.38
BRCA1-219ENST00000491747 PRO0255Q9UI72 69 aa6.43□□□□□ -1.38
BRCA1-219ENST00000491747 TRGV4A0A0C4DH28 118 aa6.43□□□□□ -1.38
BRCA1-219ENST00000491747 LINC00694P0DN24 101 aa6.43□□□□□ -1.38
BRCA1-219ENST00000491747 SOSTDC1Q6X4U4 206 aa6.43□□□□□ -1.38
BRCA1-219ENST00000491747 LINC00643Q86TS7 51 aa6.42□□□□□ -1.38
BRCA1-219ENST00000491747 LOC100131303A0A0U1RQF7 123 aa6.42□□□□□ -1.38
BRCA1-219ENST00000491747 K7EQD1 137 aa6.42□□□□□ -1.38
BRCA1-219ENST00000491747 CHCHD5Q9BSY4 110 aa6.42□□□□□ -1.38
BRCA1-219ENST00000491747 CDC42SE2Q9NRR3 84 aa6.42□□□□□ -1.38
BRCA1-219ENST00000491747 TRAV13-2A0A0B4J235 113 aa6.41□□□□□ -1.38
BRCA1-219ENST00000491747 BAALC-AS2P0C853 105 aa6.41□□□□□ -1.38
BRCA1-219ENST00000491747 INAFM2P0DMQ5 153 aa6.41□□□□□ -1.38
BRCA1-219ENST00000491747 CCL18P55774 89 aa6.41□□□□□ -1.38
BRCA1-219ENST00000491747 FAM236AA0A1B0GUQ0 79 aa6.4□□□□□ -1.38
BRCA1-219ENST00000491747 FAM236BA0A1B0GV22 79 aa6.4□□□□□ -1.38
BRCA1-219ENST00000491747 UBE2L6O14933 153 aa6.4□□□□□ -1.38
BRCA1-219ENST00000491747 Q6ZR54 194 aa6.4□□□□□ -1.38
BRCA1-219ENST00000491747 NTM-AS1Q6ZSK4 140 aa6.4□□□□□ -1.39
BRCA1-219ENST00000491747 CRPP02741 224 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms