RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 CXCL5P42830 114 aa8.18□□□□□ -1.1
PHF1-210ENST00000488767 UNQ6190/PRO20217Q6UXQ8 127 aa8.18□□□□□ -1.1
PHF1-210ENST00000488767 VPS13BQ7Z7G8 4022 aa8.16□□□□□ -1.1
PHF1-210ENST00000488767 KIAA0087Q14695 138 aa8.16□□□□□ -1.1
PHF1-210ENST00000488767 F8VRH5 84 aa8.15□□□□□ -1.1
PHF1-210ENST00000488767 TLX1NBP0CAT3 122 aa8.15□□□□□ -1.1
PHF1-210ENST00000488767 C10orf25Q5T742 122 aa8.15□□□□□ -1.1
PHF1-210ENST00000488767 C2orf82Q6UX34 121 aa8.15□□□□□ -1.1
PHF1-210ENST00000488767 C6orf48Q9UBA6 75 aa8.15□□□□□ -1.1
PHF1-210ENST00000488767 SMIM1B2RUZ4 78 aa8.14□□□□□ -1.11
PHF1-210ENST00000488767 NDUFC2-KCTD14E9PQ53 114 aa8.14□□□□□ -1.11
PHF1-210ENST00000488767 IGLC3P0DOY3 106 aa8.14□□□□□ -1.11
PHF1-210ENST00000488767 S100A1P23297 94 aa8.14□□□□□ -1.11
PHF1-210ENST00000488767 COX7B2Q8TF08 81 aa8.14□□□□□ -1.11
PHF1-210ENST00000488767 IFI27L1Q96BM0 104 aa8.14□□□□□ -1.11
PHF1-210ENST00000488767 SPINK8P0C7L1 97 aa8.13□□□□□ -1.11
PHF1-210ENST00000488767 GAGE2EQ4V326 116 aa8.13□□□□□ -1.11
PHF1-210ENST00000488767 GAGE2DQ9UEU5 116 aa8.13□□□□□ -1.11
PHF1-210ENST00000488767 TRAV12-1A0A0B4J245 112 aa8.12□□□□□ -1.11
PHF1-210ENST00000488767 C9orf116Q5BN46 136 aaPredicted RBP8.12□□□□□ -1.11
PHF1-210ENST00000488767 TMEM170BQ5T4T1 132 aa8.12□□□□□ -1.11
PHF1-210ENST00000488767 Q6ZRP5 223 aa8.12□□□□□ -1.11
PHF1-210ENST00000488767 CHTOPQ9Y3Y2 248 aaKnown RBP8.12□□□□□ -1.11
PHF1-210ENST00000488767 SCO1O75880 301 aa8.11□□□□□ -1.11
PHF1-210ENST00000488767 SERF1AO75920 110 aa8.11□□□□□ -1.11
PHF1-210ENST00000488767 LEPROTL1O95214 131 aa8.1□□□□□ -1.11
PHF1-210ENST00000488767 LINC00310P59036 64 aa8.1□□□□□ -1.11
PHF1-210ENST00000488767 SFTA2Q6UW10 78 aa8.1□□□□□ -1.11
PHF1-210ENST00000488767 FAM19A2Q8N3H0 131 aa8.1□□□□□ -1.11
PHF1-210ENST00000488767 HSPB8Q9UJY1 196 aa8.1□□□□□ -1.11
PHF1-210ENST00000488767 ZNF22P17026 224 aaPredicted RBP8.09□□□□□ -1.11
PHF1-210ENST00000488767 A0A1W2PNN7 141 aa8.08□□□□□ -1.12
PHF1-210ENST00000488767 C11orf86A6NJI1 115 aa8.08□□□□□ -1.12
PHF1-210ENST00000488767 H0Y8G0 127 aa8.08□□□□□ -1.12
PHF1-210ENST00000488767 J3QL48 77 aa8.08□□□□□ -1.12
PHF1-210ENST00000488767 HIST1H2BKO60814 126 aa8.08□□□□□ -1.12
PHF1-210ENST00000488767 HIST1H2BJP06899 126 aa8.08□□□□□ -1.12
PHF1-210ENST00000488767 HIST1H2BOP23527 126 aa8.08□□□□□ -1.12
PHF1-210ENST00000488767 HIST1H2BBP33778 126 aa8.08□□□□□ -1.12
PHF1-210ENST00000488767 HIST1H2BDP58876 126 aa8.08□□□□□ -1.12
PHF1-210ENST00000488767 KRTAP10-4P60372 401 aaPredicted RBP8.08□□□□□ -1.12
PHF1-210ENST00000488767 HIST1H2BCP62807 126 aa8.08□□□□□ -1.12
PHF1-210ENST00000488767 HIST2H2BEQ16778 126 aa8.08□□□□□ -1.12
PHF1-210ENST00000488767 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.08□□□□□ -1.12
PHF1-210ENST00000488767 FAM19A5Q7Z5A7 132 aaPredicted RBP8.08□□□□□ -1.12
PHF1-210ENST00000488767 HIST1H2BHQ93079 126 aa8.08□□□□□ -1.12
PHF1-210ENST00000488767 HIST1H2BNQ99877 126 aa8.08□□□□□ -1.12
PHF1-210ENST00000488767 HIST1H2BMQ99879 126 aa8.08□□□□□ -1.12
PHF1-210ENST00000488767 IGLV5-39A0A0G2JS06 123 aa8.07□□□□□ -1.12
PHF1-210ENST00000488767 PRR3P79522 188 aaKnown RBP8.07□□□□□ -1.12
PHF1-210ENST00000488767 ODF1Q14990 250 aa8.07□□□□□ -1.12
PHF1-210ENST00000488767 COA6Q5JTJ3 125 aaKnown RBP8.06□□□□□ -1.12
PHF1-210ENST00000488767 DMBT1Q9UGM3 2413 aaPredicted RBP8.05□□□□□ -1.12
PHF1-210ENST00000488767 FLG2Q5D862 2391 aaPredicted RBP8.05□□□□□ -1.12
PHF1-210ENST00000488767 M0QXV9 152 aa8.05□□□□□ -1.12
PHF1-210ENST00000488767 NUPR1O60356 82 aa8.05□□□□□ -1.12
PHF1-210ENST00000488767 FABP4P15090 132 aa8.05□□□□□ -1.12
PHF1-210ENST00000488767 UBE2BP63146 152 aa8.05□□□□□ -1.12
PHF1-210ENST00000488767 MYCBP2O75592 4640 aa8.05□□□□□ -1.12
PHF1-210ENST00000488767 FAM168BA1KXE4 195 aa8.04□□□□□ -1.12
PHF1-210ENST00000488767 ATP6V1G1O75348 118 aa8.04□□□□□ -1.12
PHF1-210ENST00000488767 PLNP26678 52 aa8.04□□□□□ -1.12
PHF1-210ENST00000488767 PHF5AQ7RTV0 110 aaKnown RBP8.04□□□□□ -1.12
PHF1-210ENST00000488767 MAP1LC3CQ9BXW4 147 aa8.04□□□□□ -1.12
PHF1-210ENST00000488767 OXTP01178 125 aa8.03□□□□□ -1.12
PHF1-210ENST00000488767 LBHQ53QV2 105 aaPredicted RBP8.03□□□□□ -1.12
PHF1-210ENST00000488767 C9orf129Q5T035 196 aaKnown RBP8.03□□□□□ -1.12
PHF1-210ENST00000488767 XAGE1AQ9HD64 81 aa8.03□□□□□ -1.12
PHF1-210ENST00000488767 TMEM223A0PJW6 202 aa8.02□□□□□ -1.13
PHF1-210ENST00000488767 KRTAP29-1A8MX34 341 aaPredicted RBP8.02□□□□□ -1.13
PHF1-210ENST00000488767 PFN2P35080 140 aa8.02□□□□□ -1.13
PHF1-210ENST00000488767 COX17Q14061 63 aa8.02□□□□□ -1.13
PHF1-210ENST00000488767 ERG28Q9UKR5 140 aa8.02□□□□□ -1.13
PHF1-210ENST00000488767 HERVK_113P61574 105 aa8.01□□□□□ -1.13
PHF1-210ENST00000488767 PSORS1C2Q9UIG4 136 aa8.01□□□□□ -1.13
PHF1-210ENST00000488767 DPM2O94777 84 aa8□□□□□ -1.13
PHF1-210ENST00000488767 HNRNPA3P51991 378 aaKnown RBP8□□□□□ -1.13
PHF1-210ENST00000488767 C1orf137Q5JT78 98 aa8□□□□□ -1.13
PHF1-210ENST00000488767 SPINK6Q6UWN8 80 aa8□□□□□ -1.13
PHF1-210ENST00000488767 LINC00587B1AMM8 73 aa7.99□□□□□ -1.13
PHF1-210ENST00000488767 REG3GQ6UW15 175 aa7.99□□□□□ -1.13
PHF1-210ENST00000488767 NKAPP1Q8N9T2 125 aa7.99□□□□□ -1.13
PHF1-210ENST00000488767 ZNF625Q96I27 306 aaPredicted RBP7.99□□□□□ -1.13
PHF1-210ENST00000488767 IGKCP01834 107 aa7.98□□□□□ -1.13
PHF1-210ENST00000488767 HERV-K104P63124 156 aa7.98□□□□□ -1.13
PHF1-210ENST00000488767 TP73-AS1Q9UF72 201 aa7.98□□□□□ -1.13
PHF1-210ENST00000488767 C22orf24Q9Y442 160 aa7.98□□□□□ -1.13
PHF1-210ENST00000488767 MYMXA0A1B0GTQ4 84 aa7.97□□□□□ -1.13
PHF1-210ENST00000488767 LINC00158P58513 81 aa7.97□□□□□ -1.13
PHF1-210ENST00000488767 RPL24P83731 157 aaKnown RBP7.97□□□□□ -1.13
PHF1-210ENST00000488767 MEIG1Q5JSS6 88 aa7.97□□□□□ -1.13
PHF1-210ENST00000488767 SERTAD4-AS1Q5TG53 156 aa7.97□□□□□ -1.13
PHF1-210ENST00000488767 MRPL55Q7Z7F7 128 aaKnown RBP7.97□□□□□ -1.13
PHF1-210ENST00000488767 PLEKHB2Q96CS7 222 aa7.97□□□□□ -1.13
PHF1-210ENST00000488767 PLA2G2DQ9UNK4 145 aa7.97□□□□□ -1.13
PHF1-210ENST00000488767 SYS1-DBNDD2H3BUS1 97 aa7.96□□□□□ -1.14
PHF1-210ENST00000488767 PMCHL2Q9BQD1 86 aa7.96□□□□□ -1.14
PHF1-210ENST00000488767 PET117Q6UWS5 81 aa7.95□□□□□ -1.14
PHF1-210ENST00000488767 KRTAP7-1Q8IUC3 87 aa7.95□□□□□ -1.14
PHF1-210ENST00000488767 SND1-IT1Q9HBX3 110 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms