RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 IGKV2-28A0A075B6P5 120 aa4.31□□□□□ -1.72
PDPN-205ENST00000487038 IGKV2D-28P01615 120 aa4.31□□□□□ -1.72
PDPN-205ENST00000487038 RAB5AP20339 215 aa4.31□□□□□ -1.72
PDPN-205ENST00000487038 MT1HP80294 61 aa4.31□□□□□ -1.72
PDPN-205ENST00000487038 PRLHP81277 87 aa4.31□□□□□ -1.72
PDPN-205ENST00000487038 FAM104BQ5XKR9 115 aa4.31□□□□□ -1.72
PDPN-205ENST00000487038 C3orf22Q8N5N4 141 aa4.31□□□□□ -1.72
PDPN-205ENST00000487038 IGLV5-37A0A075B6J1 123 aa4.3□□□□□ -1.72
PDPN-205ENST00000487038 CEBPGP53567 150 aa4.3□□□□□ -1.72
PDPN-205ENST00000487038 SEC11AP67812 179 aa4.3□□□□□ -1.72
PDPN-205ENST00000487038 GNB1LQ9BYB4 327 aa4.3□□□□□ -1.72
PDPN-205ENST00000487038 EIF5A2Q9GZV4 153 aaKnown RBP4.3□□□□□ -1.72
PDPN-205ENST00000487038 OSTCQ9NRP0 149 aa4.3□□□□□ -1.72
PDPN-205ENST00000487038 NAT8BQ9UHF3 227 aa4.3□□□□□ -1.72
PDPN-205ENST00000487038 A0A1B0GW15 77 aa4.29□□□□□ -1.72
PDPN-205ENST00000487038 D6R8Y8 96 aa4.29□□□□□ -1.72
PDPN-205ENST00000487038 SPINK1P00995 79 aa4.29□□□□□ -1.72
PDPN-205ENST00000487038 HERVK_113P63121 156 aa4.29□□□□□ -1.72
PDPN-205ENST00000487038 LCE2CQ5TA81 110 aa4.29□□□□□ -1.72
PDPN-205ENST00000487038 CBLN2Q8IUK8 224 aa4.29□□□□□ -1.72
PDPN-205ENST00000487038 TMEM126AQ9H061 195 aa4.29□□□□□ -1.72
PDPN-205ENST00000487038 ZNF706Q9Y5V0 76 aaPredicted RBP4.29□□□□□ -1.72
PDPN-205ENST00000487038 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.28□□□□□ -1.72
PDPN-205ENST00000487038 F8W036 122 aa4.28□□□□□ -1.72
PDPN-205ENST00000487038 S100A8P05109 93 aa4.28□□□□□ -1.72
PDPN-205ENST00000487038 LORP23490 312 aaPredicted RBP4.28□□□□□ -1.72
PDPN-205ENST00000487038 XP32Q5T750 250 aa4.28□□□□□ -1.72
PDPN-205ENST00000487038 LINC01551Q86U37 167 aa4.28□□□□□ -1.72
PDPN-205ENST00000487038 PLEKHB2Q96CS7 222 aa4.28□□□□□ -1.72
PDPN-205ENST00000487038 SMIM7Q9BQ49 75 aa4.28□□□□□ -1.72
PDPN-205ENST00000487038 VCX2Q9H322 139 aa4.28□□□□□ -1.72
PDPN-205ENST00000487038 NPYP01303 97 aa4.27□□□□□ -1.73
PDPN-205ENST00000487038 PPBPP02775 128 aa4.27□□□□□ -1.73
PDPN-205ENST00000487038 NPSP0C0P6 89 aa4.27□□□□□ -1.73
PDPN-205ENST00000487038 KRTAP10-6P60371 365 aaPredicted RBP4.27□□□□□ -1.73
PDPN-205ENST00000487038 FAM19A3Q7Z5A8 133 aa4.27□□□□□ -1.73
PDPN-205ENST00000487038 Q8NBF4 154 aa4.27□□□□□ -1.73
PDPN-205ENST00000487038 HIGD2AQ9BW72 106 aa4.27□□□□□ -1.73
PDPN-205ENST00000487038 GEMIN7Q9H840 131 aaKnown RBP4.27□□□□□ -1.73
PDPN-205ENST00000487038 CYSLTR1Q9Y271 337 aa4.27□□□□□ -1.73
PDPN-205ENST00000487038 V9GYV3 84 aa4.27□□□□□ -1.73
PDPN-205ENST00000487038 SSPOA2VEC9 5147 aa4.27□□□□□ -1.73
PDPN-205ENST00000487038 USH2AO75445 5202 aa4.27□□□□□ -1.73
PDPN-205ENST00000487038 M0R2T5 61 aa4.26□□□□□ -1.73
PDPN-205ENST00000487038 RPS29P62273 56 aaKnown RBP4.26□□□□□ -1.73
PDPN-205ENST00000487038 FAM74A3Q4VXF1 159 aa4.26□□□□□ -1.73
PDPN-205ENST00000487038 PAPPA-AS1Q5QFB9 102 aa4.26□□□□□ -1.73
PDPN-205ENST00000487038 AMELXQ99217 191 aa4.26□□□□□ -1.73
PDPN-205ENST00000487038 TMEM238C9JI98 176 aa4.25□□□□□ -1.73
PDPN-205ENST00000487038 RGS21Q2M5E4 152 aa4.25□□□□□ -1.73
PDPN-205ENST00000487038 KRTAP19-2Q3LHN2 52 aa4.25□□□□□ -1.73
PDPN-205ENST00000487038 C2orf66Q6UXQ4 117 aa4.25□□□□□ -1.73
PDPN-205ENST00000487038 ORMDL3Q8N138 153 aa4.25□□□□□ -1.73
PDPN-205ENST00000487038 COX7B2Q8TF08 81 aa4.25□□□□□ -1.73
PDPN-205ENST00000487038 SPRR4Q96PI1 79 aa4.25□□□□□ -1.73
PDPN-205ENST00000487038 CDKN2A-AS1Q9UH64 79 aa4.25□□□□□ -1.73
PDPN-205ENST00000487038 M0R378 163 aa4.24□□□□□ -1.73
PDPN-205ENST00000487038 RAB5BP61020 215 aa4.24□□□□□ -1.73
PDPN-205ENST00000487038 RPL24P83731 157 aaKnown RBP4.24□□□□□ -1.73
PDPN-205ENST00000487038 SLC51BQ86UW2 128 aa4.24□□□□□ -1.73
PDPN-205ENST00000487038 FCGBPQ9Y6R7 5405 aaPredicted RBP4.24□□□□□ -1.73
PDPN-205ENST00000487038 FLGP20930 4061 aaPredicted RBP4.24□□□□□ -1.73
PDPN-205ENST00000487038 IGLV8-61A0A075B6I0 122 aa4.23□□□□□ -1.73
PDPN-205ENST00000487038 SMIM27A0A1W2PRY6 76 aa4.23□□□□□ -1.73
PDPN-205ENST00000487038 SMIM1B2RUZ4 78 aa4.23□□□□□ -1.73
PDPN-205ENST00000487038 SLC25A20O43772 301 aa4.23□□□□□ -1.73
PDPN-205ENST00000487038 SCO1O75880 301 aa4.23□□□□□ -1.73
PDPN-205ENST00000487038 ATP5LO75964 103 aa4.23□□□□□ -1.73
PDPN-205ENST00000487038 BLOC1S1P78537 153 aa4.23□□□□□ -1.73
PDPN-205ENST00000487038 ORMDL2Q53FV1 153 aa4.23□□□□□ -1.73
PDPN-205ENST00000487038 PDZD11Q5EBL8 140 aa4.23□□□□□ -1.73
PDPN-205ENST00000487038 ZC2HC1BQ5TFG8 222 aa4.23□□□□□ -1.73
PDPN-205ENST00000487038 Q8N377 158 aa4.23□□□□□ -1.73
PDPN-205ENST00000487038 PRELID3AQ96N28 172 aa4.23□□□□□ -1.73
PDPN-205ENST00000487038 MAP1LC3AQ9H492 121 aa4.23□□□□□ -1.73
PDPN-205ENST00000487038 K7EMI3 77 aa4.22□□□□□ -1.73
PDPN-205ENST00000487038 G0S2P27469 103 aa4.22□□□□□ -1.73
PDPN-205ENST00000487038 MRPL54Q6P161 138 aaKnown RBP4.22□□□□□ -1.73
PDPN-205ENST00000487038 TMEM136Q6ZRR5 245 aa4.22□□□□□ -1.73
PDPN-205ENST00000487038 LAMTOR2Q9Y2Q5 125 aa4.22□□□□□ -1.73
PDPN-205ENST00000487038 LOC389332A0A1B0GUA5 103 aa4.21□□□□□ -1.74
PDPN-205ENST00000487038 PRSS47A8MTI9 375 aa4.21□□□□□ -1.74
PDPN-205ENST00000487038 VPREB1P12018 145 aa4.21□□□□□ -1.74
PDPN-205ENST00000487038 ADIRFQ15847 76 aa4.21□□□□□ -1.74
PDPN-205ENST00000487038 AKAP14Q86UN6 197 aa4.21□□□□□ -1.74
PDPN-205ENST00000487038 IGIPA6NJ69 53 aa4.2□□□□□ -1.74
PDPN-205ENST00000487038 PFN2P35080 140 aa4.2□□□□□ -1.74
PDPN-205ENST00000487038 PCOTHQ58A44 107 aa4.2□□□□□ -1.74
PDPN-205ENST00000487038 COX6B2Q6YFQ2 88 aa4.2□□□□□ -1.74
PDPN-205ENST00000487038 ATP5L2Q7Z4Y8 100 aa4.2□□□□□ -1.74
PDPN-205ENST00000487038 Q8N8P6 123 aa4.2□□□□□ -1.74
PDPN-205ENST00000487038 TIMM17AQ99595 171 aa4.2□□□□□ -1.74
PDPN-205ENST00000487038 TINCRA0A1B0GVN0 87 aa4.19□□□□□ -1.74
PDPN-205ENST00000487038 A0A1B0GXF2 115 aa4.19□□□□□ -1.74
PDPN-205ENST00000487038 RAB14P61106 215 aa4.19□□□□□ -1.74
PDPN-205ENST00000487038 RPL23P62829 140 aaKnown RBP4.19□□□□□ -1.74
PDPN-205ENST00000487038 MOBPQ13875 183 aa4.19□□□□□ -1.74
PDPN-205ENST00000487038 COX17Q14061 63 aa4.19□□□□□ -1.74
PDPN-205ENST00000487038 SND1-IT1Q9HBX3 110 aa4.19□□□□□ -1.74
PDPN-205ENST00000487038 IGLV5-45A0A087WSX0 123 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms