RNA–Protein interactions for RNA: ENST00000485820.1

YIF1A-208, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 653 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-208ENST00000485820 C6orf226Q5I0X4 101 aa9.29□□□□□ -0.92
YIF1A-208ENST00000485820 Q8IZM0 81 aa9.29□□□□□ -0.92
YIF1A-208ENST00000485820 TOMM7Q9P0U1 55 aa9.29□□□□□ -0.92
YIF1A-208ENST00000485820 PRSS2P07478 247 aa9.28□□□□□ -0.92
YIF1A-208ENST00000485820 PMVKQ15126 192 aa9.28□□□□□ -0.92
YIF1A-208ENST00000485820 IGLV5-45A0A087WSX0 123 aa9.27□□□□□ -0.93
YIF1A-208ENST00000485820 FAM168BA1KXE4 195 aa9.27□□□□□ -0.93
YIF1A-208ENST00000485820 NDUFC2-KCTD14E9PQ53 114 aa9.27□□□□□ -0.93
YIF1A-208ENST00000485820 SRSF9Q13242 221 aaKnown RBP eCLIP9.27□□□□□ -0.93
YIF1A-208ENST00000485820 GAGE2EQ4V326 116 aa9.27□□□□□ -0.93
YIF1A-208ENST00000485820 KRTAP7-1Q8IUC3 87 aa9.27□□□□□ -0.93
YIF1A-208ENST00000485820 PACRGQ96M98 296 aaPredicted RBP9.27□□□□□ -0.93
YIF1A-208ENST00000485820 GAGE2DQ9UEU5 116 aa9.27□□□□□ -0.93
YIF1A-208ENST00000485820 MT1HL1P0DM35 61 aa9.26□□□□□ -0.93
YIF1A-208ENST00000485820 CKS1BP61024 79 aa9.26□□□□□ -0.93
YIF1A-208ENST00000485820 PHF5AQ7RTV0 110 aaKnown RBP9.26□□□□□ -0.93
YIF1A-208ENST00000485820 LINC00469Q8N7U9 141 aa9.26□□□□□ -0.93
YIF1A-208ENST00000485820 SMIM1B2RUZ4 78 aa9.25□□□□□ -0.93
YIF1A-208ENST00000485820 PDZD11Q5EBL8 140 aa9.25□□□□□ -0.93
YIF1A-208ENST00000485820 RAB5BP61020 215 aa9.24□□□□□ -0.93
YIF1A-208ENST00000485820 PMCHL1Q16048 86 aa9.24□□□□□ -0.93
YIF1A-208ENST00000485820 C9orf129Q5T035 196 aaKnown RBP9.24□□□□□ -0.93
YIF1A-208ENST00000485820 SLC7A5P1Q8MH63 180 aa9.24□□□□□ -0.93
YIF1A-208ENST00000485820 PSORS1C2Q9UIG4 136 aa9.24□□□□□ -0.93
YIF1A-208ENST00000485820 HBDP02042 147 aa9.23□□□□□ -0.93
YIF1A-208ENST00000485820 SPINK6Q6UWN8 80 aa9.23□□□□□ -0.93
YIF1A-208ENST00000485820 F8VRH5 84 aa9.22□□□□□ -0.93
YIF1A-208ENST00000485820 IGLC3P0DOY3 106 aa9.22□□□□□ -0.93
YIF1A-208ENST00000485820 KRTAP11-1Q8IUC1 163 aa9.22□□□□□ -0.93
YIF1A-208ENST00000485820 CBLN2Q8IUK8 224 aa9.22□□□□□ -0.93
YIF1A-208ENST00000485820 SPINK8P0C7L1 97 aa9.21□□□□□ -0.94
YIF1A-208ENST00000485820 NDUFA6P56556 154 aa9.21□□□□□ -0.94
YIF1A-208ENST00000485820 FAM19A5Q7Z5A7 132 aaPredicted RBP9.21□□□□□ -0.94
YIF1A-208ENST00000485820 COX7B2Q8TF08 81 aa9.21□□□□□ -0.94
YIF1A-208ENST00000485820 ATP5LO75964 103 aa9.2□□□□□ -0.94
YIF1A-208ENST00000485820 CXCL5P42830 114 aa9.2□□□□□ -0.94
YIF1A-208ENST00000485820 LINC01600Q96MT4 127 aa9.2□□□□□ -0.94
YIF1A-208ENST00000485820 SERTAD4-AS1Q5TG53 156 aa9.19□□□□□ -0.94
YIF1A-208ENST00000485820 H3BRM9 83 aa9.18□□□□□ -0.94
YIF1A-208ENST00000485820 ZNF22P17026 224 aaPredicted RBP9.18□□□□□ -0.94
YIF1A-208ENST00000485820 C1orf137Q5JT78 98 aa9.18□□□□□ -0.94
YIF1A-208ENST00000485820 BAGE3Q86Y29 109 aa9.18□□□□□ -0.94
YIF1A-208ENST00000485820 CHCHD1Q96BP2 118 aaKnown RBP9.18□□□□□ -0.94
YIF1A-208ENST00000485820 IGLV5-39A0A0G2JS06 123 aa9.17□□□□□ -0.94
YIF1A-208ENST00000485820 XAGE1AQ9HD64 81 aa9.17□□□□□ -0.94
YIF1A-208ENST00000485820 M0QXV9 152 aa9.16□□□□□ -0.94
YIF1A-208ENST00000485820 C11orf86A6NJI1 115 aa9.15□□□□□ -0.94
YIF1A-208ENST00000485820 TRGC2P03986 189 aa9.15□□□□□ -0.94
YIF1A-208ENST00000485820 IGLV7-43P04211 117 aa9.15□□□□□ -0.94
YIF1A-208ENST00000485820 REG3GQ6UW15 175 aa9.15□□□□□ -0.94
YIF1A-208ENST00000485820 C22orf24Q9Y442 160 aa9.15□□□□□ -0.94
YIF1A-208ENST00000485820 TNXBP22105 4242 aa9.14□□□□□ -0.95
YIF1A-208ENST00000485820 KRTAP10-8P60410 259 aa9.14□□□□□ -0.95
YIF1A-208ENST00000485820 IFI27L1Q96BM0 104 aa9.14□□□□□ -0.95
YIF1A-208ENST00000485820 COLCA2A8K830 154 aa9.13□□□□□ -0.95
YIF1A-208ENST00000485820 ODF1Q14990 250 aa9.13□□□□□ -0.95
YIF1A-208ENST00000485820 CHTOPQ9Y3Y2 248 aaKnown RBP9.13□□□□□ -0.95
YIF1A-208ENST00000485820 TRAV12-1A0A0B4J245 112 aa9.12□□□□□ -0.95
YIF1A-208ENST00000485820 UBE2BP63146 152 aa9.12□□□□□ -0.95
YIF1A-208ENST00000485820 FAM19A2Q8N3H0 131 aa9.12□□□□□ -0.95
YIF1A-208ENST00000485820 HSBP1O75506 76 aa9.11□□□□□ -0.95
YIF1A-208ENST00000485820 TMEM170BQ5T4T1 132 aa9.11□□□□□ -0.95
YIF1A-208ENST00000485820 PLA2G2DQ9UNK4 145 aa9.11□□□□□ -0.95
YIF1A-208ENST00000485820 LINC00310P59036 64 aa9.1□□□□□ -0.95
YIF1A-208ENST00000485820 LBHQ53QV2 105 aaPredicted RBP9.1□□□□□ -0.95
YIF1A-208ENST00000485820 TP73-AS1Q9UF72 201 aa9.1□□□□□ -0.95
YIF1A-208ENST00000485820 TMEM223A0PJW6 202 aa9.08□□□□□ -0.96
YIF1A-208ENST00000485820 NUPR1O60356 82 aa9.08□□□□□ -0.96
YIF1A-208ENST00000485820 SERF1AO75920 110 aa9.08□□□□□ -0.96
YIF1A-208ENST00000485820 PFN2P35080 140 aa9.08□□□□□ -0.96
YIF1A-208ENST00000485820 MRPL55Q7Z7F7 128 aaKnown RBP9.08□□□□□ -0.96
YIF1A-208ENST00000485820 DIRC1Q969H9 104 aa9.08□□□□□ -0.96
YIF1A-208ENST00000485820 ZNF625Q96I27 306 aaPredicted RBP9.07□□□□□ -0.96
YIF1A-208ENST00000485820 LINC00167Q96N53 147 aa9.07□□□□□ -0.96
YIF1A-208ENST00000485820 ERG28Q9UKR5 140 aa9.07□□□□□ -0.96
YIF1A-208ENST00000485820 IGLV5-37A0A075B6J1 123 aa9.06□□□□□ -0.96
YIF1A-208ENST00000485820 H0Y9J4 135 aa9.06□□□□□ -0.96
YIF1A-208ENST00000485820 COX17Q14061 63 aa9.06□□□□□ -0.96
YIF1A-208ENST00000485820 HMCN2Q8NDA2 5059 aa9.05□□□□□ -0.96
YIF1A-208ENST00000485820 SND1-IT1Q9HBX3 110 aa9.05□□□□□ -0.96
YIF1A-208ENST00000485820 LEPROTL1O95214 131 aa9.04□□□□□ -0.96
YIF1A-208ENST00000485820 SFTA2Q6UW10 78 aa9.04□□□□□ -0.96
YIF1A-208ENST00000485820 RPL37AP8A6NKH3 93 aa9.03□□□□□ -0.96
YIF1A-208ENST00000485820 ZNF861PO60384 105 aa9.03□□□□□ -0.96
YIF1A-208ENST00000485820 GAGE10A6NGK3 116 aa9.02□□□□□ -0.97
YIF1A-208ENST00000485820 SCO1O75880 301 aa9.02□□□□□ -0.97
YIF1A-208ENST00000485820 KRTAP1-4P0C5Y4 121 aa9.02□□□□□ -0.97
YIF1A-208ENST00000485820 VPREB1P12018 145 aa9.01□□□□□ -0.97
YIF1A-208ENST00000485820 PRR26Q8N8Z3 221 aa9.01□□□□□ -0.97
YIF1A-208ENST00000485820 H0Y8G0 127 aa9□□□□□ -0.97
YIF1A-208ENST00000485820 BCE1O60756 84 aa9□□□□□ -0.97
YIF1A-208ENST00000485820 FABP4P15090 132 aa9□□□□□ -0.97
YIF1A-208ENST00000485820 NKAPP1Q8N9T2 125 aa9□□□□□ -0.97
YIF1A-208ENST00000485820 Q8NDZ9 215 aa9□□□□□ -0.97
YIF1A-208ENST00000485820 LINC00158P58513 81 aa8.99□□□□□ -0.97
YIF1A-208ENST00000485820 HSPB8Q9UJY1 196 aa8.99□□□□□ -0.97
YIF1A-208ENST00000485820 RPL24P83731 157 aaKnown RBP8.98□□□□□ -0.97
YIF1A-208ENST00000485820 IGLV1-50A0A075B6I6 118 aa8.97□□□□□ -0.97
YIF1A-208ENST00000485820 A0A0U1RRA0 63 aa8.97□□□□□ -0.97
YIF1A-208ENST00000485820 HIST1H2BKO60814 126 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms