RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 PRSS47A8MTI9 375 aa6.41□□□□□ -1.38
HMGN1-215ENST00000485550 UBE2BP63146 152 aa6.41□□□□□ -1.38
HMGN1-215ENST00000485550 C2orf66Q6UXQ4 117 aa6.41□□□□□ -1.38
HMGN1-215ENST00000485550 Q8N8P6 123 aa6.41□□□□□ -1.38
HMGN1-215ENST00000485550 DIRC1Q969H9 104 aa6.41□□□□□ -1.38
HMGN1-215ENST00000485550 PACRGQ96M98 296 aaPredicted RBP6.41□□□□□ -1.38
HMGN1-215ENST00000485550 TOMM7Q9P0U1 55 aa6.41□□□□□ -1.38
HMGN1-215ENST00000485550 CYSLTR1Q9Y271 337 aa6.41□□□□□ -1.38
HMGN1-215ENST00000485550 M0QXV9 152 aa6.4□□□□□ -1.38
HMGN1-215ENST00000485550 MT-ND4LP03901 98 aa6.4□□□□□ -1.38
HMGN1-215ENST00000485550 Q6ZN92 141 aa6.4□□□□□ -1.38
HMGN1-215ENST00000485550 LINC00469Q8N7U9 141 aa6.4□□□□□ -1.38
HMGN1-215ENST00000485550 C2orf88Q9BSF0 95 aa6.4□□□□□ -1.38
HMGN1-215ENST00000485550 VCX2Q9H322 139 aa6.4□□□□□ -1.38
HMGN1-215ENST00000485550 LAMTOR2Q9Y2Q5 125 aa6.4□□□□□ -1.38
HMGN1-215ENST00000485550 TRBV30A0A0K0K1B3 111 aa6.39□□□□□ -1.39
HMGN1-215ENST00000485550 NDUFC2-KCTD14E9PQ53 114 aa6.39□□□□□ -1.39
HMGN1-215ENST00000485550 C9orf129Q5T035 196 aaKnown RBP6.39□□□□□ -1.39
HMGN1-215ENST00000485550 LINC00173Q6ZV60 143 aa6.39□□□□□ -1.39
HMGN1-215ENST00000485550 ANAPC16Q96DE5 110 aa6.39□□□□□ -1.39
HMGN1-215ENST00000485550 FAT4Q6V0I7 4981 aa6.38□□□□□ -1.39
HMGN1-215ENST00000485550 H0Y9J4 135 aa6.38□□□□□ -1.39
HMGN1-215ENST00000485550 PRSS2P07478 247 aa6.38□□□□□ -1.39
HMGN1-215ENST00000485550 PNRC1Q12796 327 aaPredicted RBP6.38□□□□□ -1.39
HMGN1-215ENST00000485550 ORMDL2Q53FV1 153 aa6.38□□□□□ -1.39
HMGN1-215ENST00000485550 C6orf226Q5I0X4 101 aa6.38□□□□□ -1.39
HMGN1-215ENST00000485550 AMELXQ99217 191 aa6.38□□□□□ -1.39
HMGN1-215ENST00000485550 IGIPA6NJ69 53 aa6.37□□□□□ -1.39
HMGN1-215ENST00000485550 CKS1BP61024 79 aa6.37□□□□□ -1.39
HMGN1-215ENST00000485550 RAB14P61106 215 aa6.37□□□□□ -1.39
HMGN1-215ENST00000485550 KIAA1644Q3SXP7 199 aa6.37□□□□□ -1.39
HMGN1-215ENST00000485550 LINC01561Q8N1V8 128 aa6.37□□□□□ -1.39
HMGN1-215ENST00000485550 CTDSP1Q9GZU7 261 aa6.37□□□□□ -1.39
HMGN1-215ENST00000485550 ALKBH7Q9BT30 221 aaPredicted RBP6.36□□□□□ -1.39
HMGN1-215ENST00000485550 XAGE1AQ9HD64 81 aa6.36□□□□□ -1.39
HMGN1-215ENST00000485550 CDKN2A-AS1Q9UH64 79 aa6.36□□□□□ -1.39
HMGN1-215ENST00000485550 KRTAP1-4P0C5Y4 121 aa6.35□□□□□ -1.39
HMGN1-215ENST00000485550 NXT2Q9NPJ8 142 aaKnown RBP6.35□□□□□ -1.39
HMGN1-215ENST00000485550 C22orf24Q9Y442 160 aa6.35□□□□□ -1.39
HMGN1-215ENST00000485550 HERVK_113P63121 156 aa6.34□□□□□ -1.39
HMGN1-215ENST00000485550 PRR4Q16378 134 aa6.34□□□□□ -1.39
HMGN1-215ENST00000485550 Q8IZM0 81 aa6.34□□□□□ -1.39
HMGN1-215ENST00000485550 GEMIN7Q9H840 131 aaKnown RBP6.34□□□□□ -1.39
HMGN1-215ENST00000485550 IGLV1-50A0A075B6I6 118 aa6.33□□□□□ -1.4
HMGN1-215ENST00000485550 K7EMI3 77 aa6.33□□□□□ -1.4
HMGN1-215ENST00000485550 NPSP0C0P6 89 aa6.33□□□□□ -1.4
HMGN1-215ENST00000485550 ADCYAP1P18509 176 aa6.33□□□□□ -1.4
HMGN1-215ENST00000485550 FAM19A3Q7Z5A8 133 aa6.33□□□□□ -1.4
HMGN1-215ENST00000485550 TOMM6Q96B49 74 aa6.33□□□□□ -1.4
HMGN1-215ENST00000485550 SEC11AP67812 179 aa6.32□□□□□ -1.4
HMGN1-215ENST00000485550 PAPPA-AS1Q5QFB9 102 aa6.32□□□□□ -1.4
HMGN1-215ENST00000485550 SCGB3A1Q96QR1 104 aa6.32□□□□□ -1.4
HMGN1-215ENST00000485550 TIMM17AQ99595 171 aa6.32□□□□□ -1.4
HMGN1-215ENST00000485550 F8VRH5 84 aa6.31□□□□□ -1.4
HMGN1-215ENST00000485550 ZNF861PO60384 105 aa6.31□□□□□ -1.4
HMGN1-215ENST00000485550 G0S2P27469 103 aa6.31□□□□□ -1.4
HMGN1-215ENST00000485550 LBHQ53QV2 105 aaPredicted RBP6.31□□□□□ -1.4
HMGN1-215ENST00000485550 ERASQ7Z444 233 aa6.31□□□□□ -1.4
HMGN1-215ENST00000485550 RAB5BP61020 215 aa6.3□□□□□ -1.4
HMGN1-215ENST00000485550 CLLU1Q5K131 121 aa6.3□□□□□ -1.4
HMGN1-215ENST00000485550 TMEM218A2RU14 115 aa6.29□□□□□ -1.4
HMGN1-215ENST00000485550 GAGE10A6NGK3 116 aa6.29□□□□□ -1.4
HMGN1-215ENST00000485550 RPL37AP8A6NKH3 93 aa6.29□□□□□ -1.4
HMGN1-215ENST00000485550 SMIM1B2RUZ4 78 aa6.29□□□□□ -1.4
HMGN1-215ENST00000485550 NUPR1O60356 82 aa6.29□□□□□ -1.4
HMGN1-215ENST00000485550 SPINK8P0C7L1 97 aa6.29□□□□□ -1.4
HMGN1-215ENST00000485550 MRPL55Q7Z7F7 128 aaKnown RBP6.29□□□□□ -1.4
HMGN1-215ENST00000485550 COX7B2Q8TF08 81 aa6.29□□□□□ -1.4
HMGN1-215ENST00000485550 TINCRA0A1B0GVN0 87 aa6.28□□□□□ -1.4
HMGN1-215ENST00000485550 TSPAN13O95857 204 aa6.28□□□□□ -1.4
HMGN1-215ENST00000485550 RPL13AP40429 203 aaKnown RBP6.28□□□□□ -1.4
HMGN1-215ENST00000485550 CXCL5P42830 114 aa6.28□□□□□ -1.4
HMGN1-215ENST00000485550 PDZD11Q5EBL8 140 aa6.28□□□□□ -1.4
HMGN1-215ENST00000485550 LINC00167Q96N53 147 aa6.28□□□□□ -1.4
HMGN1-215ENST00000485550 CST9LQ9H4G1 147 aa6.28□□□□□ -1.4
HMGN1-215ENST00000485550 CARHSP1Q9Y2V2 147 aaKnown RBP6.27□□□□□ -1.41
HMGN1-215ENST00000485550 TRAV9-1A0A075B6T8 112 aa6.26□□□□□ -1.41
HMGN1-215ENST00000485550 BCE1O60756 84 aa6.26□□□□□ -1.41
HMGN1-215ENST00000485550 S100PP25815 95 aa6.26□□□□□ -1.41
HMGN1-215ENST00000485550 RPL28P46779 137 aaKnown RBP6.26□□□□□ -1.41
HMGN1-215ENST00000485550 FA2HQ7L5A8 372 aa6.26□□□□□ -1.41
HMGN1-215ENST00000485550 GNB1LQ9BYB4 327 aa6.26□□□□□ -1.41
HMGN1-215ENST00000485550 ANAPC11Q9NYG5 84 aa6.26□□□□□ -1.41
HMGN1-215ENST00000485550 TP73-AS1Q9UF72 201 aa6.26□□□□□ -1.41
HMGN1-215ENST00000485550 IGLV5-45A0A087WSX0 123 aa6.25□□□□□ -1.41
HMGN1-215ENST00000485550 SCO1O75880 301 aa6.25□□□□□ -1.41
HMGN1-215ENST00000485550 FABP9Q0Z7S8 132 aa6.25□□□□□ -1.41
HMGN1-215ENST00000485550 PMVKQ15126 192 aa6.25□□□□□ -1.41
HMGN1-215ENST00000485550 UQCC3Q6UW78 93 aa6.25□□□□□ -1.41
HMGN1-215ENST00000485550 SMCO4Q9NRQ5 59 aa6.25□□□□□ -1.41
HMGN1-215ENST00000485550 A0A087X002 238 aa6.24□□□□□ -1.41
HMGN1-215ENST00000485550 LINC01546A6NGU7 62 aa6.24□□□□□ -1.41
HMGN1-215ENST00000485550 NDUFA6P56556 154 aa6.24□□□□□ -1.41
HMGN1-215ENST00000485550 IFITM2Q01629 132 aa6.24□□□□□ -1.41
HMGN1-215ENST00000485550 SEC11CQ9BY50 192 aa6.24□□□□□ -1.41
HMGN1-215ENST00000485550 IGKV2-28A0A075B6P5 120 aa6.23□□□□□ -1.41
HMGN1-215ENST00000485550 LINC01549A6NIU2 74 aa6.23□□□□□ -1.41
HMGN1-215ENST00000485550 IGKV2D-28P01615 120 aa6.23□□□□□ -1.41
HMGN1-215ENST00000485550 PFN2P35080 140 aa6.23□□□□□ -1.41
HMGN1-215ENST00000485550 NKAPP1Q8N9T2 125 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms