RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 MAP1LC3CQ9BXW4 147 aa16.84■□□□□ 0.29
GTF3C4-202ENST00000483873 MRPL35Q9NZE8 188 aaKnown RBP16.84■□□□□ 0.29
GTF3C4-202ENST00000483873 SRRM2Q9UQ35 2752 aaKnown RBP16.83■□□□□ 0.28
GTF3C4-202ENST00000483873 A0A087WYN8 130 aa16.83■□□□□ 0.28
GTF3C4-202ENST00000483873 KIAA0087Q14695 138 aa16.83■□□□□ 0.28
GTF3C4-202ENST00000483873 ODF1Q14990 250 aa16.83■□□□□ 0.28
GTF3C4-202ENST00000483873 LINC00469Q8N7U9 141 aa16.83■□□□□ 0.28
GTF3C4-202ENST00000483873 DPH3Q96FX2 82 aa16.83■□□□□ 0.28
GTF3C4-202ENST00000483873 C11orf86A6NJI1 115 aa16.82■□□□□ 0.28
GTF3C4-202ENST00000483873 SNRPEP62304 92 aaKnown RBP16.82■□□□□ 0.28
GTF3C4-202ENST00000483873 LINC01561Q8N1V8 128 aa16.82■□□□□ 0.28
GTF3C4-202ENST00000483873 F8VRH5 84 aa16.81■□□□□ 0.28
GTF3C4-202ENST00000483873 MAJINQ3KP22 176 aa16.81■□□□□ 0.28
GTF3C4-202ENST00000483873 C10orf25Q5T742 122 aa16.81■□□□□ 0.28
GTF3C4-202ENST00000483873 ZNF22P17026 224 aaPredicted RBP16.8■□□□□ 0.28
GTF3C4-202ENST00000483873 UNQ6190/PRO20217Q6UXQ8 127 aa16.79■□□□□ 0.28
GTF3C4-202ENST00000483873 C5orf52A6NGY3 159 aa16.79■□□□□ 0.28
GTF3C4-202ENST00000483873 SYS1-DBNDD2H3BUS1 97 aa16.79■□□□□ 0.28
GTF3C4-202ENST00000483873 NDUFA1O15239 70 aa16.79■□□□□ 0.28
GTF3C4-202ENST00000483873 LOC107984640A0A0U1RRK4 108 aa16.78■□□□□ 0.28
GTF3C4-202ENST00000483873 C3orf79P0CE67 100 aa16.78■□□□□ 0.28
GTF3C4-202ENST00000483873 S100A2P29034 98 aa16.78■□□□□ 0.28
GTF3C4-202ENST00000483873 HIST1H2BLQ99880 126 aa16.78■□□□□ 0.28
GTF3C4-202ENST00000483873 PMCHL2Q9BQD1 86 aa16.78■□□□□ 0.28
GTF3C4-202ENST00000483873 PKIGQ9Y2B9 76 aa16.78■□□□□ 0.28
GTF3C4-202ENST00000483873 F8WDY8 70 aa16.77■□□□□ 0.27
GTF3C4-202ENST00000483873 PLAC8Q9NZF1 115 aa16.77■□□□□ 0.27
GTF3C4-202ENST00000483873 SMIM1B2RUZ4 78 aa16.76■□□□□ 0.27
GTF3C4-202ENST00000483873 GAGE2BQ13066 116 aa16.76■□□□□ 0.27
GTF3C4-202ENST00000483873 RNF151Q2KHN1 245 aa16.76■□□□□ 0.27
GTF3C4-202ENST00000483873 C2orf82Q6UX34 121 aa16.76■□□□□ 0.27
GTF3C4-202ENST00000483873 TOMM7Q9P0U1 55 aa16.76■□□□□ 0.27
GTF3C4-202ENST00000483873 C6orf48Q9UBA6 75 aa16.76■□□□□ 0.27
GTF3C4-202ENST00000483873 PLA2G1BP04054 148 aaKnown RBP16.75■□□□□ 0.27
GTF3C4-202ENST00000483873 SPINK8P0C7L1 97 aa16.75■□□□□ 0.27
GTF3C4-202ENST00000483873 PTTG1IPP53801 180 aa16.75■□□□□ 0.27
GTF3C4-202ENST00000483873 STPG4Q8N801 248 aa16.75■□□□□ 0.27
GTF3C4-202ENST00000483873 INAFM2P0DMQ5 153 aa16.74■□□□□ 0.27
GTF3C4-202ENST00000483873 KRTDAPP60985 99 aa16.74■□□□□ 0.27
GTF3C4-202ENST00000483873 TMEM170BQ5T4T1 132 aa16.74■□□□□ 0.27
GTF3C4-202ENST00000483873 TMA7Q9Y2S6 64 aaKnown RBP16.74■□□□□ 0.27
GTF3C4-202ENST00000483873 H3BRM9 83 aa16.73■□□□□ 0.27
GTF3C4-202ENST00000483873 KRTAP10-4P60372 401 aaPredicted RBP16.73■□□□□ 0.27
GTF3C4-202ENST00000483873 RPL18AQ02543 176 aaKnown RBP16.73■□□□□ 0.27
GTF3C4-202ENST00000483873 PET117Q6UWS5 81 aa16.72■□□□□ 0.27
GTF3C4-202ENST00000483873 PRSS2P07478 247 aa16.71■□□□□ 0.27
GTF3C4-202ENST00000483873 LINC00474Q9P2X8 69 aa16.71■□□□□ 0.27
GTF3C4-202ENST00000483873 DPM2O94777 84 aa16.7■□□□□ 0.26
GTF3C4-202ENST00000483873 LINC01545Q5VT33 79 aa16.7■□□□□ 0.26
GTF3C4-202ENST00000483873 Q8IZM0 81 aa16.7■□□□□ 0.26
GTF3C4-202ENST00000483873 PLNP26678 52 aa16.69■□□□□ 0.26
GTF3C4-202ENST00000483873 C6orf226Q5I0X4 101 aa16.69■□□□□ 0.26
GTF3C4-202ENST00000483873 TMEM223A0PJW6 202 aa16.68■□□□□ 0.26
GTF3C4-202ENST00000483873 IGKCP01834 107 aa16.68■□□□□ 0.26
GTF3C4-202ENST00000483873 RPL37AP61513 92 aaKnown RBP16.68■□□□□ 0.26
GTF3C4-202ENST00000483873 IGLV5-39A0A0G2JS06 123 aa16.67■□□□□ 0.26
GTF3C4-202ENST00000483873 C9orf116Q5BN46 136 aaPredicted RBP16.67■□□□□ 0.26
GTF3C4-202ENST00000483873 TRBV30A0A0K0K1B3 111 aa16.66■□□□□ 0.26
GTF3C4-202ENST00000483873 CKS1BP61024 79 aa16.66■□□□□ 0.26
GTF3C4-202ENST00000483873 Q6ZRP5 223 aa16.66■□□□□ 0.26
GTF3C4-202ENST00000483873 TLX1NBP0CAT3 122 aa16.65■□□□□ 0.26
GTF3C4-202ENST00000483873 COX7B2Q8TF08 81 aa16.65■□□□□ 0.26
GTF3C4-202ENST00000483873 PKHD1L1Q86WI1 4243 aa16.64■□□□□ 0.25
GTF3C4-202ENST00000483873 FLG2Q5D862 2391 aaPredicted RBP16.63■□□□□ 0.25
GTF3C4-202ENST00000483873 A0A1W2PNN7 141 aa16.63■□□□□ 0.25
GTF3C4-202ENST00000483873 MYCBP2O75592 4640 aa16.61■□□□□ 0.25
GTF3C4-202ENST00000483873 GAGE2EQ4V326 116 aa16.61■□□□□ 0.25
GTF3C4-202ENST00000483873 GAGE2DQ9UEU5 116 aa16.61■□□□□ 0.25
GTF3C4-202ENST00000483873 C20orf202A1L168 122 aa16.59■□□□□ 0.25
GTF3C4-202ENST00000483873 C7orf33Q8WU49 177 aa16.59■□□□□ 0.25
GTF3C4-202ENST00000483873 NDUFC2-KCTD14E9PQ53 114 aa16.58■□□□□ 0.24
GTF3C4-202ENST00000483873 CXCL5P42830 114 aa16.58■□□□□ 0.24
GTF3C4-202ENST00000483873 HNRNPA3P51991 378 aaKnown RBP16.57■□□□□ 0.24
GTF3C4-202ENST00000483873 FAM168BA1KXE4 195 aa16.56■□□□□ 0.24
GTF3C4-202ENST00000483873 HERVK_113P61574 105 aa16.54■□□□□ 0.24
GTF3C4-202ENST00000483873 ATOH7Q8N100 152 aa16.53■□□□□ 0.24
GTF3C4-202ENST00000483873 C9orf129Q5T035 196 aaKnown RBP16.53■□□□□ 0.24
GTF3C4-202ENST00000483873 LEPROTO15243 131 aa16.52■□□□□ 0.23
GTF3C4-202ENST00000483873 TSPEAR-AS2P59090 65 aa16.52■□□□□ 0.23
GTF3C4-202ENST00000483873 DMBT1Q9UGM3 2413 aaPredicted RBP16.51■□□□□ 0.23
GTF3C4-202ENST00000483873 PHF5AQ7RTV0 110 aaKnown RBP16.51■□□□□ 0.23
GTF3C4-202ENST00000483873 FAM19A5Q7Z5A7 132 aaPredicted RBP16.51■□□□□ 0.23
GTF3C4-202ENST00000483873 KRTAP7-1Q8IUC3 87 aa16.5■□□□□ 0.23
GTF3C4-202ENST00000483873 E9PLD3 99 aa16.49■□□□□ 0.23
GTF3C4-202ENST00000483873 ZNF625Q96I27 306 aaPredicted RBP16.49■□□□□ 0.23
GTF3C4-202ENST00000483873 HERC1Q15751 4861 aa16.49■□□□□ 0.23
GTF3C4-202ENST00000483873 PRR3P79522 188 aaKnown RBP16.48■□□□□ 0.23
GTF3C4-202ENST00000483873 PLEKHB2Q96CS7 222 aa16.48■□□□□ 0.23
GTF3C4-202ENST00000483873 AKR1D1P51857 326 aa16.47■□□□□ 0.23
GTF3C4-202ENST00000483873 XAGE1AQ9HD64 81 aa16.47■□□□□ 0.23
GTF3C4-202ENST00000483873 J3QQQ9 107 aa16.46■□□□□ 0.23
GTF3C4-202ENST00000483873 SCGB1D1O95968 90 aa16.46■□□□□ 0.23
GTF3C4-202ENST00000483873 LRP1Q07954 4544 aaKnown RBP16.46■□□□□ 0.22
GTF3C4-202ENST00000483873 NDUFA12Q9UI09 145 aa16.45■□□□□ 0.22
GTF3C4-202ENST00000483873 FAT3Q8TDW7 4589 aa16.44■□□□□ 0.22
GTF3C4-202ENST00000483873 IGKV2D-26A0A0A0MRZ7 120 aa16.44■□□□□ 0.22
GTF3C4-202ENST00000483873 ANKRD39Q53RE8 183 aa16.44■□□□□ 0.22
GTF3C4-202ENST00000483873 LGALS3P17931 250 aaKnown RBP16.43■□□□□ 0.22
GTF3C4-202ENST00000483873 SFTA2Q6UW10 78 aa16.43■□□□□ 0.22
GTF3C4-202ENST00000483873 SERTAD4-AS1Q5TG53 156 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms