RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 PACRGQ96M98 296 aaPredicted RBP6.41□□□□□ -1.38
SPTLC1-206ENST00000482632 PKIGQ9Y2B9 76 aa6.41□□□□□ -1.38
SPTLC1-206ENST00000482632 A0A087WZ39 114 aa6.4□□□□□ -1.38
SPTLC1-206ENST00000482632 A0A0J9YXV3 536 aa6.4□□□□□ -1.38
SPTLC1-206ENST00000482632 PRSS2P07478 247 aa6.4□□□□□ -1.38
SPTLC1-206ENST00000482632 HERVK_113P63121 156 aa6.4□□□□□ -1.38
SPTLC1-206ENST00000482632 SEC11AP67812 179 aa6.4□□□□□ -1.38
SPTLC1-206ENST00000482632 RPL18AQ02543 176 aaKnown RBP6.4□□□□□ -1.38
SPTLC1-206ENST00000482632 GAGE2BQ13066 116 aa6.4□□□□□ -1.38
SPTLC1-206ENST00000482632 LINC00469Q8N7U9 141 aa6.4□□□□□ -1.38
SPTLC1-206ENST00000482632 URB1-AS1Q96HZ7 61 aa6.4□□□□□ -1.38
SPTLC1-206ENST00000482632 A0A096LNI7 61 aa6.39□□□□□ -1.39
SPTLC1-206ENST00000482632 LOC107984640A0A0U1RRK4 108 aa6.39□□□□□ -1.39
SPTLC1-206ENST00000482632 NDUFA1O15239 70 aa6.39□□□□□ -1.39
SPTLC1-206ENST00000482632 PMVKQ15126 192 aa6.39□□□□□ -1.39
SPTLC1-206ENST00000482632 C2orf48Q96LS8 159 aa6.39□□□□□ -1.39
SPTLC1-206ENST00000482632 A0A096LNJ9 63 aa6.38□□□□□ -1.39
SPTLC1-206ENST00000482632 HSBP1O75506 76 aa6.38□□□□□ -1.39
SPTLC1-206ENST00000482632 STPG4Q8N801 248 aa6.38□□□□□ -1.39
SPTLC1-206ENST00000482632 SPACA4Q8TDM5 124 aa6.38□□□□□ -1.39
SPTLC1-206ENST00000482632 CST9LQ9H4G1 147 aa6.38□□□□□ -1.39
SPTLC1-206ENST00000482632 CDKN2A-AS1Q9UH64 79 aa6.38□□□□□ -1.39
SPTLC1-206ENST00000482632 DMBT1Q9UGM3 2413 aaPredicted RBP6.38□□□□□ -1.39
SPTLC1-206ENST00000482632 A0A087WYN8 130 aa6.37□□□□□ -1.39
SPTLC1-206ENST00000482632 ATP5LO75964 103 aa6.37□□□□□ -1.39
SPTLC1-206ENST00000482632 CKS1BP61024 79 aa6.37□□□□□ -1.39
SPTLC1-206ENST00000482632 C6orf226Q5I0X4 101 aa6.37□□□□□ -1.39
SPTLC1-206ENST00000482632 LCE5AQ5TCM9 118 aa6.37□□□□□ -1.39
SPTLC1-206ENST00000482632 C2orf82Q6UX34 121 aa6.37□□□□□ -1.39
SPTLC1-206ENST00000482632 UNQ6190/PRO20217Q6UXQ8 127 aa6.37□□□□□ -1.39
SPTLC1-206ENST00000482632 CHCHD1Q96BP2 118 aaKnown RBP6.37□□□□□ -1.39
SPTLC1-206ENST00000482632 TINCRA0A1B0GVN0 87 aa6.36□□□□□ -1.39
SPTLC1-206ENST00000482632 KRTAP23-1A1A580 65 aa6.36□□□□□ -1.39
SPTLC1-206ENST00000482632 COLCA2A8K830 154 aa6.36□□□□□ -1.39
SPTLC1-206ENST00000482632 SPINK8P0C7L1 97 aa6.36□□□□□ -1.39
SPTLC1-206ENST00000482632 INAFM2P0DMQ5 153 aa6.36□□□□□ -1.39
SPTLC1-206ENST00000482632 C10orf25Q5T742 122 aa6.36□□□□□ -1.39
SPTLC1-206ENST00000482632 FAM19A2Q8N3H0 131 aa6.36□□□□□ -1.39
SPTLC1-206ENST00000482632 MYCBP2O75592 4640 aa6.36□□□□□ -1.39
SPTLC1-206ENST00000482632 DNAH8Q96JB1 4490 aa6.36□□□□□ -1.39
SPTLC1-206ENST00000482632 H0Y8G0 127 aa6.35□□□□□ -1.39
SPTLC1-206ENST00000482632 H3BRM9 83 aa6.35□□□□□ -1.39
SPTLC1-206ENST00000482632 RPL37AP61513 92 aaKnown RBP6.35□□□□□ -1.39
SPTLC1-206ENST00000482632 PDZD11Q5EBL8 140 aa6.35□□□□□ -1.39
SPTLC1-206ENST00000482632 FAM19A3Q7Z5A8 133 aa6.35□□□□□ -1.39
SPTLC1-206ENST00000482632 LINC01561Q8N1V8 128 aa6.35□□□□□ -1.39
SPTLC1-206ENST00000482632 LINC00474Q9P2X8 69 aa6.35□□□□□ -1.39
SPTLC1-206ENST00000482632 SRRM2Q9UQ35 2752 aaKnown RBP6.35□□□□□ -1.39
SPTLC1-206ENST00000482632 F8WDY8 70 aa6.34□□□□□ -1.39
SPTLC1-206ENST00000482632 SERF1AO75920 110 aa6.34□□□□□ -1.39
SPTLC1-206ENST00000482632 PTTG1IPP53801 180 aa6.34□□□□□ -1.39
SPTLC1-206ENST00000482632 CIRBPQ14011 172 aaKnown RBP6.34□□□□□ -1.39
SPTLC1-206ENST00000482632 KIAA0087Q14695 138 aa6.34□□□□□ -1.39
SPTLC1-206ENST00000482632 GAGE2EQ4V326 116 aa6.34□□□□□ -1.39
SPTLC1-206ENST00000482632 Q8IZM0 81 aa6.34□□□□□ -1.39
SPTLC1-206ENST00000482632 C7orf33Q8WU49 177 aa6.34□□□□□ -1.39
SPTLC1-206ENST00000482632 IFI27L1Q96BM0 104 aa6.34□□□□□ -1.39
SPTLC1-206ENST00000482632 MRPL35Q9NZE8 188 aaKnown RBP6.34□□□□□ -1.39
SPTLC1-206ENST00000482632 C6orf48Q9UBA6 75 aa6.34□□□□□ -1.39
SPTLC1-206ENST00000482632 GAGE2DQ9UEU5 116 aa6.34□□□□□ -1.39
SPTLC1-206ENST00000482632 SMIM1B2RUZ4 78 aa6.33□□□□□ -1.4
SPTLC1-206ENST00000482632 C9orf116Q5BN46 136 aaPredicted RBP6.33□□□□□ -1.4
SPTLC1-206ENST00000482632 TMEM170BQ5T4T1 132 aa6.33□□□□□ -1.4
SPTLC1-206ENST00000482632 COX7B2Q8TF08 81 aa6.33□□□□□ -1.4
SPTLC1-206ENST00000482632 CHTOPQ9Y3Y2 248 aaKnown RBP6.33□□□□□ -1.4
SPTLC1-206ENST00000482632 FAT1Q14517 4588 aa6.32□□□□□ -1.4
SPTLC1-206ENST00000482632 TRBV30A0A0K0K1B3 111 aa6.32□□□□□ -1.4
SPTLC1-206ENST00000482632 IGLC3P0DOY3 106 aa6.32□□□□□ -1.4
SPTLC1-206ENST00000482632 FABP4P15090 132 aa6.32□□□□□ -1.4
SPTLC1-206ENST00000482632 SVIPQ8NHG7 77 aa6.32□□□□□ -1.4
SPTLC1-206ENST00000482632 PLAC8Q9NZF1 115 aa6.32□□□□□ -1.4
SPTLC1-206ENST00000482632 C11orf86A6NJI1 115 aa6.31□□□□□ -1.4
SPTLC1-206ENST00000482632 LEPROTL1O95214 131 aa6.31□□□□□ -1.4
SPTLC1-206ENST00000482632 ZNF22P17026 224 aaPredicted RBP6.31□□□□□ -1.4
SPTLC1-206ENST00000482632 IGLV5-45A0A087WSX0 123 aa6.3□□□□□ -1.4
SPTLC1-206ENST00000482632 F8VRH5 84 aa6.3□□□□□ -1.4
SPTLC1-206ENST00000482632 CXCL5P42830 114 aa6.3□□□□□ -1.4
SPTLC1-206ENST00000482632 Q6ZRP5 223 aa6.3□□□□□ -1.4
SPTLC1-206ENST00000482632 FAM19A5Q7Z5A7 132 aaPredicted RBP6.3□□□□□ -1.4
SPTLC1-206ENST00000482632 KRTAP3-1Q9BYR8 98 aa6.3□□□□□ -1.4
SPTLC1-206ENST00000482632 NDUFC2-KCTD14E9PQ53 114 aa6.29□□□□□ -1.4
SPTLC1-206ENST00000482632 NUPR1O60356 82 aa6.29□□□□□ -1.4
SPTLC1-206ENST00000482632 KRTAP9-3Q9BYQ3 159 aa6.29□□□□□ -1.4
SPTLC1-206ENST00000482632 HSPB8Q9UJY1 196 aa6.29□□□□□ -1.4
SPTLC1-206ENST00000482632 TRAV12-1A0A0B4J245 112 aa6.28□□□□□ -1.4
SPTLC1-206ENST00000482632 A0A1W2PNN7 141 aa6.28□□□□□ -1.4
SPTLC1-206ENST00000482632 FAM168BA1KXE4 195 aa6.28□□□□□ -1.4
SPTLC1-206ENST00000482632 HIST1H2BKO60814 126 aa6.28□□□□□ -1.4
SPTLC1-206ENST00000482632 ATP6V1G1O75348 118 aa6.28□□□□□ -1.4
SPTLC1-206ENST00000482632 HIST1H2BJP06899 126 aa6.28□□□□□ -1.4
SPTLC1-206ENST00000482632 HIST1H2BOP23527 126 aa6.28□□□□□ -1.4
SPTLC1-206ENST00000482632 HIST1H2BBP33778 126 aa6.28□□□□□ -1.4
SPTLC1-206ENST00000482632 HIST1H2BDP58876 126 aa6.28□□□□□ -1.4
SPTLC1-206ENST00000482632 HIST1H2BCP62807 126 aa6.28□□□□□ -1.4
SPTLC1-206ENST00000482632 HIST2H2BEQ16778 126 aa6.28□□□□□ -1.4
SPTLC1-206ENST00000482632 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.28□□□□□ -1.4
SPTLC1-206ENST00000482632 HIST1H2BHQ93079 126 aa6.28□□□□□ -1.4
SPTLC1-206ENST00000482632 HIST1H2BNQ99877 126 aa6.28□□□□□ -1.4
SPTLC1-206ENST00000482632 HIST1H2BMQ99879 126 aa6.28□□□□□ -1.4
SPTLC1-206ENST00000482632 TLX1NBP0CAT3 122 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms