RNA–Protein interactions for RNA: ENST00000481281.5

HDAC1-207, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-207ENST00000481281 CST9LQ9H4G1 147 aa8.1□□□□□ -1.11
HDAC1-207ENST00000481281 NDUFC2-KCTD14E9PQ53 114 aa8.09□□□□□ -1.11
HDAC1-207ENST00000481281 PRSS2P07478 247 aa8.09□□□□□ -1.11
HDAC1-207ENST00000481281 LINC00614P0C842 121 aa8.09□□□□□ -1.11
HDAC1-207ENST00000481281 PMVKQ15126 192 aa8.09□□□□□ -1.11
HDAC1-207ENST00000481281 PACRGQ96M98 296 aaPredicted RBP8.09□□□□□ -1.11
HDAC1-207ENST00000481281 TOMM7Q9P0U1 55 aa8.09□□□□□ -1.11
HDAC1-207ENST00000481281 FAT3Q8TDW7 4589 aa8.08□□□□□ -1.12
HDAC1-207ENST00000481281 SMIM1B2RUZ4 78 aa8.08□□□□□ -1.12
HDAC1-207ENST00000481281 CKS1BP61024 79 aa8.08□□□□□ -1.12
HDAC1-207ENST00000481281 LINC00469Q8N7U9 141 aa8.08□□□□□ -1.12
HDAC1-207ENST00000481281 KRTAP3-3Q9BYR6 98 aa8.08□□□□□ -1.12
HDAC1-207ENST00000481281 KRTAP3-2Q9BYR7 98 aa8.08□□□□□ -1.12
HDAC1-207ENST00000481281 FAM168BA1KXE4 195 aa8.07□□□□□ -1.12
HDAC1-207ENST00000481281 HBDP02042 147 aa8.07□□□□□ -1.12
HDAC1-207ENST00000481281 GAGE2EQ4V326 116 aa8.07□□□□□ -1.12
HDAC1-207ENST00000481281 C6orf226Q5I0X4 101 aa8.07□□□□□ -1.12
HDAC1-207ENST00000481281 GAGE2DQ9UEU5 116 aa8.07□□□□□ -1.12
HDAC1-207ENST00000481281 MT1HL1P0DM35 61 aa8.06□□□□□ -1.12
HDAC1-207ENST00000481281 CXCL5P42830 114 aa8.06□□□□□ -1.12
HDAC1-207ENST00000481281 RAB5BP61020 215 aa8.06□□□□□ -1.12
HDAC1-207ENST00000481281 PDZD11Q5EBL8 140 aa8.06□□□□□ -1.12
HDAC1-207ENST00000481281 PHF5AQ7RTV0 110 aaKnown RBP8.06□□□□□ -1.12
HDAC1-207ENST00000481281 KRTAP7-1Q8IUC3 87 aa8.06□□□□□ -1.12
HDAC1-207ENST00000481281 F8VRH5 84 aa8.05□□□□□ -1.12
HDAC1-207ENST00000481281 SRSF9Q13242 221 aaKnown RBP eCLIP8.05□□□□□ -1.12
HDAC1-207ENST00000481281 PMCHL1Q16048 86 aa8.05□□□□□ -1.12
HDAC1-207ENST00000481281 C9orf129Q5T035 196 aaKnown RBP8.05□□□□□ -1.12
HDAC1-207ENST00000481281 CBLN2Q8IUK8 224 aa8.05□□□□□ -1.12
HDAC1-207ENST00000481281 IGLC3P0DOY3 106 aa8.04□□□□□ -1.12
HDAC1-207ENST00000481281 SPINK6Q6UWN8 80 aa8.04□□□□□ -1.12
HDAC1-207ENST00000481281 FAM19A5Q7Z5A7 132 aaPredicted RBP8.04□□□□□ -1.12
HDAC1-207ENST00000481281 PSORS1C2Q9UIG4 136 aa8.04□□□□□ -1.12
HDAC1-207ENST00000481281 SPINK8P0C7L1 97 aa8.03□□□□□ -1.12
HDAC1-207ENST00000481281 COX7B2Q8TF08 81 aa8.03□□□□□ -1.12
HDAC1-207ENST00000481281 H3BRM9 83 aa8.02□□□□□ -1.13
HDAC1-207ENST00000481281 ATP5LO75964 103 aa8.02□□□□□ -1.13
HDAC1-207ENST00000481281 KRTAP11-1Q8IUC1 163 aa8.02□□□□□ -1.13
HDAC1-207ENST00000481281 SLC7A5P1Q8MH63 180 aa8.02□□□□□ -1.13
HDAC1-207ENST00000481281 CHCHD1Q96BP2 118 aaKnown RBP8.02□□□□□ -1.13
HDAC1-207ENST00000481281 IGLV5-39A0A0G2JS06 123 aa8.01□□□□□ -1.13
HDAC1-207ENST00000481281 M0QXV9 152 aa8.01□□□□□ -1.13
HDAC1-207ENST00000481281 ZNF22P17026 224 aaPredicted RBP8.01□□□□□ -1.13
HDAC1-207ENST00000481281 NDUFA6P56556 154 aa8.01□□□□□ -1.13
HDAC1-207ENST00000481281 C1orf137Q5JT78 98 aa8□□□□□ -1.13
HDAC1-207ENST00000481281 LINC01600Q96MT4 127 aa8□□□□□ -1.13
HDAC1-207ENST00000481281 XAGE1AQ9HD64 81 aa8□□□□□ -1.13
HDAC1-207ENST00000481281 ODF1Q14990 250 aa7.99□□□□□ -1.13
HDAC1-207ENST00000481281 SERTAD4-AS1Q5TG53 156 aa7.99□□□□□ -1.13
HDAC1-207ENST00000481281 BAGE3Q86Y29 109 aa7.99□□□□□ -1.13
HDAC1-207ENST00000481281 C11orf86A6NJI1 115 aa7.98□□□□□ -1.13
HDAC1-207ENST00000481281 REG3GQ6UW15 175 aa7.98□□□□□ -1.13
HDAC1-207ENST00000481281 TRGC2P03986 189 aa7.97□□□□□ -1.13
HDAC1-207ENST00000481281 IGLV7-43P04211 117 aa7.97□□□□□ -1.13
HDAC1-207ENST00000481281 TRAV12-1A0A0B4J245 112 aa7.96□□□□□ -1.14
HDAC1-207ENST00000481281 HSBP1O75506 76 aa7.96□□□□□ -1.14
HDAC1-207ENST00000481281 UBE2BP63146 152 aa7.96□□□□□ -1.14
HDAC1-207ENST00000481281 IFI27L1Q96BM0 104 aa7.96□□□□□ -1.14
HDAC1-207ENST00000481281 CHTOPQ9Y3Y2 248 aaKnown RBP7.96□□□□□ -1.14
HDAC1-207ENST00000481281 LINC00310P59036 64 aa7.95□□□□□ -1.14
HDAC1-207ENST00000481281 TP73-AS1Q9UF72 201 aa7.95□□□□□ -1.14
HDAC1-207ENST00000481281 C22orf24Q9Y442 160 aa7.95□□□□□ -1.14
HDAC1-207ENST00000481281 COLCA2A8K830 154 aa7.94□□□□□ -1.14
HDAC1-207ENST00000481281 TMEM170BQ5T4T1 132 aa7.94□□□□□ -1.14
HDAC1-207ENST00000481281 FAM19A2Q8N3H0 131 aa7.94□□□□□ -1.14
HDAC1-207ENST00000481281 PLA2G2DQ9UNK4 145 aa7.94□□□□□ -1.14
HDAC1-207ENST00000481281 KRTAP10-8P60410 259 aa7.93□□□□□ -1.14
HDAC1-207ENST00000481281 SERF1AO75920 110 aa7.92□□□□□ -1.14
HDAC1-207ENST00000481281 LBHQ53QV2 105 aaPredicted RBP7.92□□□□□ -1.14
HDAC1-207ENST00000481281 SFTA2Q6UW10 78 aa7.92□□□□□ -1.14
HDAC1-207ENST00000481281 MRPL55Q7Z7F7 128 aaKnown RBP7.92□□□□□ -1.14
HDAC1-207ENST00000481281 DIRC1Q969H9 104 aa7.92□□□□□ -1.14
HDAC1-207ENST00000481281 IGLV5-37A0A075B6J1 123 aa7.91□□□□□ -1.14
HDAC1-207ENST00000481281 TMEM223A0PJW6 202 aa7.91□□□□□ -1.14
HDAC1-207ENST00000481281 H0Y9J4 135 aa7.91□□□□□ -1.14
HDAC1-207ENST00000481281 ZNF625Q96I27 306 aaPredicted RBP7.91□□□□□ -1.14
HDAC1-207ENST00000481281 ERG28Q9UKR5 140 aa7.91□□□□□ -1.14
HDAC1-207ENST00000481281 HMCN2Q8NDA2 5059 aa7.9□□□□□ -1.14
HDAC1-207ENST00000481281 NUPR1O60356 82 aa7.9□□□□□ -1.14
HDAC1-207ENST00000481281 PFN2P35080 140 aa7.9□□□□□ -1.14
HDAC1-207ENST00000481281 COX17Q14061 63 aa7.9□□□□□ -1.14
HDAC1-207ENST00000481281 TNXBP22105 4242 aa7.89□□□□□ -1.15
HDAC1-207ENST00000481281 LEPROTL1O95214 131 aa7.89□□□□□ -1.15
HDAC1-207ENST00000481281 LINC00167Q96N53 147 aa7.88□□□□□ -1.15
HDAC1-207ENST00000481281 SND1-IT1Q9HBX3 110 aa7.88□□□□□ -1.15
HDAC1-207ENST00000481281 KRTAP1-4P0C5Y4 121 aa7.87□□□□□ -1.15
HDAC1-207ENST00000481281 RPL37AP8A6NKH3 93 aa7.86□□□□□ -1.15
HDAC1-207ENST00000481281 ZNF861PO60384 105 aa7.86□□□□□ -1.15
HDAC1-207ENST00000481281 VPREB1P12018 145 aa7.86□□□□□ -1.15
HDAC1-207ENST00000481281 NKAPP1Q8N9T2 125 aa7.86□□□□□ -1.15
HDAC1-207ENST00000481281 GAGE10A6NGK3 116 aa7.85□□□□□ -1.15
HDAC1-207ENST00000481281 H0Y8G0 127 aa7.85□□□□□ -1.15
HDAC1-207ENST00000481281 BCE1O60756 84 aa7.85□□□□□ -1.15
HDAC1-207ENST00000481281 SCO1O75880 301 aa7.85□□□□□ -1.15
HDAC1-207ENST00000481281 HSPB8Q9UJY1 196 aa7.85□□□□□ -1.15
HDAC1-207ENST00000481281 PLNP26678 52 aa7.84□□□□□ -1.15
HDAC1-207ENST00000481281 HIST1H2BKO60814 126 aa7.83□□□□□ -1.16
HDAC1-207ENST00000481281 HIST1H2BJP06899 126 aa7.83□□□□□ -1.16
HDAC1-207ENST00000481281 FABP4P15090 132 aa7.83□□□□□ -1.16
HDAC1-207ENST00000481281 HIST1H2BOP23527 126 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms