RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 OPRPNQ99935 248 aaPredicted RBP3.91□□□□□ -1.78
LRCH3-216ENST00000481048 SMIM2Q9BVW6 85 aa3.91□□□□□ -1.78
LRCH3-216ENST00000481048 NAT8Q9UHE5 227 aa3.91□□□□□ -1.78
LRCH3-216ENST00000481048 PYGO1Q9Y3Y4 419 aa3.91□□□□□ -1.78
LRCH3-216ENST00000481048 A0A087WZ39 114 aa3.9□□□□□ -1.79
LRCH3-216ENST00000481048 TGIF2-C20orf24A0A0A6YYL0 155 aa3.9□□□□□ -1.79
LRCH3-216ENST00000481048 H0Y9J4 135 aa3.9□□□□□ -1.79
LRCH3-216ENST00000481048 RAB5AP20339 215 aa3.9□□□□□ -1.79
LRCH3-216ENST00000481048 RPL39P62891 51 aaKnown RBP3.9□□□□□ -1.79
LRCH3-216ENST00000481048 PEA15Q15121 130 aa3.9□□□□□ -1.79
LRCH3-216ENST00000481048 ADIRFQ15847 76 aa3.9□□□□□ -1.79
LRCH3-216ENST00000481048 FAM104AQ969W3 186 aa3.9□□□□□ -1.79
LRCH3-216ENST00000481048 RNF213Q63HN8 5207 aa3.9□□□□□ -1.79
LRCH3-216ENST00000481048 D6R8Y8 96 aa3.89□□□□□ -1.79
LRCH3-216ENST00000481048 NDUFC2-KCTD14E9PQ53 114 aa3.89□□□□□ -1.79
LRCH3-216ENST00000481048 IFI27P40305 119 aaPredicted RBP3.89□□□□□ -1.79
LRCH3-216ENST00000481048 RPL13AP40429 203 aaKnown RBP3.89□□□□□ -1.79
LRCH3-216ENST00000481048 KIAA0087Q14695 138 aa3.89□□□□□ -1.79
LRCH3-216ENST00000481048 UNQ6190/PRO20217Q6UXQ8 127 aa3.89□□□□□ -1.79
LRCH3-216ENST00000481048 ATP5L2Q7Z4Y8 100 aa3.89□□□□□ -1.79
LRCH3-216ENST00000481048 ORMDL3Q8N138 153 aa3.89□□□□□ -1.79
LRCH3-216ENST00000481048 TMEM141Q96I45 108 aa3.89□□□□□ -1.79
LRCH3-216ENST00000481048 C6orf48Q9UBA6 75 aa3.89□□□□□ -1.79
LRCH3-216ENST00000481048 LAMTOR2Q9Y2Q5 125 aa3.89□□□□□ -1.79
LRCH3-216ENST00000481048 CARHSP1Q9Y2V2 147 aaKnown RBP3.89□□□□□ -1.79
LRCH3-216ENST00000481048 A0A1B0GXF2 115 aa3.88□□□□□ -1.79
LRCH3-216ENST00000481048 K7EMI3 77 aa3.88□□□□□ -1.79
LRCH3-216ENST00000481048 GAGE2EQ4V326 116 aa3.88□□□□□ -1.79
LRCH3-216ENST00000481048 LINC00242Q5T6M2 205 aa3.88□□□□□ -1.79
LRCH3-216ENST00000481048 TMEM136Q6ZRR5 245 aa3.88□□□□□ -1.79
LRCH3-216ENST00000481048 PACRGQ96M98 296 aaPredicted RBP3.88□□□□□ -1.79
LRCH3-216ENST00000481048 GAGE2DQ9UEU5 116 aa3.88□□□□□ -1.79
LRCH3-216ENST00000481048 FAM168BA1KXE4 195 aa3.87□□□□□ -1.79
LRCH3-216ENST00000481048 M0QXV9 152 aa3.87□□□□□ -1.79
LRCH3-216ENST00000481048 NPYP01303 97 aa3.87□□□□□ -1.79
LRCH3-216ENST00000481048 KRTAP1-4P0C5Y4 121 aa3.87□□□□□ -1.79
LRCH3-216ENST00000481048 G0S2P27469 103 aa3.87□□□□□ -1.79
LRCH3-216ENST00000481048 UBE2D1P51668 147 aa3.87□□□□□ -1.79
LRCH3-216ENST00000481048 UBE2BP63146 152 aa3.87□□□□□ -1.79
LRCH3-216ENST00000481048 SEC11AP67812 179 aa3.87□□□□□ -1.79
LRCH3-216ENST00000481048 MRPL54Q6P161 138 aaKnown RBP3.87□□□□□ -1.79
LRCH3-216ENST00000481048 TEX43Q6ZNM6 134 aa3.87□□□□□ -1.79
LRCH3-216ENST00000481048 PRELID3AQ96N28 172 aa3.87□□□□□ -1.79
LRCH3-216ENST00000481048 C2orf88Q9BSF0 95 aa3.87□□□□□ -1.79
LRCH3-216ENST00000481048 IGLV4-3A0A075B6K6 122 aa3.86□□□□□ -1.79
LRCH3-216ENST00000481048 C9JQL5 133 aa3.86□□□□□ -1.79
LRCH3-216ENST00000481048 NUPR1O60356 82 aa3.86□□□□□ -1.79
LRCH3-216ENST00000481048 ZNF861PO60384 105 aa3.86□□□□□ -1.79
LRCH3-216ENST00000481048 CFC1BP0CG36 223 aa3.86□□□□□ -1.79
LRCH3-216ENST00000481048 CFC1P0CG37 223 aa3.86□□□□□ -1.79
LRCH3-216ENST00000481048 PAPPA-AS1Q5QFB9 102 aa3.86□□□□□ -1.79
LRCH3-216ENST00000481048 Q6ZN92 141 aa3.86□□□□□ -1.79
LRCH3-216ENST00000481048 FAM19A5Q7Z5A7 132 aaPredicted RBP3.86□□□□□ -1.79
LRCH3-216ENST00000481048 FAM19A3Q7Z5A8 133 aa3.86□□□□□ -1.79
LRCH3-216ENST00000481048 KRTAP11-1Q8IUC1 163 aa3.86□□□□□ -1.79
LRCH3-216ENST00000481048 KRTAP7-1Q8IUC3 87 aa3.86□□□□□ -1.79
LRCH3-216ENST00000481048 Q8IZM0 81 aa3.86□□□□□ -1.79
LRCH3-216ENST00000481048 AMELXQ99217 191 aa3.86□□□□□ -1.79
LRCH3-216ENST00000481048 VCX2Q9H322 139 aa3.86□□□□□ -1.79
LRCH3-216ENST00000481048 CYSLTR1Q9Y271 337 aa3.86□□□□□ -1.79
LRCH3-216ENST00000481048 CKS1BP61024 79 aa3.85□□□□□ -1.79
LRCH3-216ENST00000481048 ORMDL2Q53FV1 153 aa3.85□□□□□ -1.79
LRCH3-216ENST00000481048 LBHQ53QV2 105 aaPredicted RBP3.85□□□□□ -1.79
LRCH3-216ENST00000481048 C6orf226Q5I0X4 101 aa3.85□□□□□ -1.79
LRCH3-216ENST00000481048 C9orf129Q5T035 196 aaKnown RBP3.85□□□□□ -1.79
LRCH3-216ENST00000481048 LCE3CQ5T5A8 94 aa3.85□□□□□ -1.79
LRCH3-216ENST00000481048 C2orf66Q6UXQ4 117 aa3.85□□□□□ -1.79
LRCH3-216ENST00000481048 Q8N8P6 123 aa3.85□□□□□ -1.79
LRCH3-216ENST00000481048 MAP1LC3AQ9H492 121 aa3.85□□□□□ -1.79
LRCH3-216ENST00000481048 TP73-AS1Q9UF72 201 aa3.85□□□□□ -1.79
LRCH3-216ENST00000481048 A0A0A0MQY5 61 aa3.84□□□□□ -1.79
LRCH3-216ENST00000481048 LINC01549A6NIU2 74 aa3.84□□□□□ -1.79
LRCH3-216ENST00000481048 CXCL5P42830 114 aa3.84□□□□□ -1.79
LRCH3-216ENST00000481048 HERVK_113P63121 156 aa3.84□□□□□ -1.79
LRCH3-216ENST00000481048 PNRC1Q12796 327 aaPredicted RBP3.84□□□□□ -1.79
LRCH3-216ENST00000481048 C2orf82Q6UX34 121 aa3.84□□□□□ -1.79
LRCH3-216ENST00000481048 NXT2Q9NPJ8 142 aaKnown RBP3.84□□□□□ -1.79
LRCH3-216ENST00000481048 LPAP08519 4548 aa3.84□□□□□ -1.8
LRCH3-216ENST00000481048 A0A0U1RQV1 116 aa3.83□□□□□ -1.8
LRCH3-216ENST00000481048 IGIPA6NJ69 53 aa3.83□□□□□ -1.8
LRCH3-216ENST00000481048 F8VRH5 84 aa3.83□□□□□ -1.8
LRCH3-216ENST00000481048 MT-ND4LP03901 98 aa3.83□□□□□ -1.8
LRCH3-216ENST00000481048 RPL28P46779 137 aaKnown RBP3.83□□□□□ -1.8
LRCH3-216ENST00000481048 ALKBH7Q9BT30 221 aaPredicted RBP3.83□□□□□ -1.8
LRCH3-216ENST00000481048 C22orf24Q9Y442 160 aa3.83□□□□□ -1.8
LRCH3-216ENST00000481048 LOC389332A0A1B0GUA5 103 aa3.82□□□□□ -1.8
LRCH3-216ENST00000481048 CTAG1AP78358 180 aa3.82□□□□□ -1.8
LRCH3-216ENST00000481048 PRR4Q16378 134 aa3.82□□□□□ -1.8
LRCH3-216ENST00000481048 LINC00173Q6ZV60 143 aa3.82□□□□□ -1.8
LRCH3-216ENST00000481048 TIMM17AQ99595 171 aa3.82□□□□□ -1.8
LRCH3-216ENST00000481048 GEMIN7Q9H840 131 aaKnown RBP3.82□□□□□ -1.8
LRCH3-216ENST00000481048 TOMM7Q9P0U1 55 aa3.82□□□□□ -1.8
LRCH3-216ENST00000481048 BCE1O60756 84 aa3.81□□□□□ -1.8
LRCH3-216ENST00000481048 CRYGAP11844 174 aa3.81□□□□□ -1.8
LRCH3-216ENST00000481048 PCP4P48539 62 aa3.81□□□□□ -1.8
LRCH3-216ENST00000481048 PDZD11Q5EBL8 140 aa3.81□□□□□ -1.8
LRCH3-216ENST00000481048 ERASQ7Z444 233 aa3.81□□□□□ -1.8
LRCH3-216ENST00000481048 MRPL55Q7Z7F7 128 aaKnown RBP3.81□□□□□ -1.8
LRCH3-216ENST00000481048 TOMM6Q96B49 74 aa3.81□□□□□ -1.8
LRCH3-216ENST00000481048 CTDSP1Q9GZU7 261 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms