RNA–Protein interactions for RNA: ENST00000479707.1

AGRN-208, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-208ENST00000479707 IGLV5-45A0A087WSX0 123 aa11.94□□□□□ -0.5
AGRN-208ENST00000479707 NUPR1O60356 82 aa11.94□□□□□ -0.5
AGRN-208ENST00000479707 PLA2G1BP04054 148 aaKnown RBP11.94□□□□□ -0.5
AGRN-208ENST00000479707 IGLC3P0DOY3 106 aa11.94□□□□□ -0.5
AGRN-208ENST00000479707 CKS1BP61024 79 aa11.94□□□□□ -0.5
AGRN-208ENST00000479707 Q8IZM0 81 aa11.94□□□□□ -0.5
AGRN-208ENST00000479707 IFI27L1Q96BM0 104 aa11.94□□□□□ -0.5
AGRN-208ENST00000479707 PLAC8Q9NZF1 115 aa11.94□□□□□ -0.5
AGRN-208ENST00000479707 SMIM1B2RUZ4 78 aa11.93□□□□□ -0.5
AGRN-208ENST00000479707 INAFM2P0DMQ5 153 aa11.93□□□□□ -0.5
AGRN-208ENST00000479707 LINC00474Q9P2X8 69 aa11.93□□□□□ -0.5
AGRN-208ENST00000479707 C9orf116Q5BN46 136 aaPredicted RBP11.92□□□□□ -0.5
AGRN-208ENST00000479707 VPS13BQ7Z7G8 4022 aa11.91□□□□□ -0.5
AGRN-208ENST00000479707 H3BRM9 83 aa11.91□□□□□ -0.5
AGRN-208ENST00000479707 CHTOPQ9Y3Y2 248 aaKnown RBP11.91□□□□□ -0.5
AGRN-208ENST00000479707 TRBV30A0A0K0K1B3 111 aa11.9□□□□□ -0.5
AGRN-208ENST00000479707 ZNF22P17026 224 aaPredicted RBP11.9□□□□□ -0.5
AGRN-208ENST00000479707 COX7B2Q8TF08 81 aa11.9□□□□□ -0.5
AGRN-208ENST00000479707 C11orf86A6NJI1 115 aa11.89□□□□□ -0.51
AGRN-208ENST00000479707 H0Y8G0 127 aa11.89□□□□□ -0.51
AGRN-208ENST00000479707 LEPROTL1O95214 131 aa11.89□□□□□ -0.51
AGRN-208ENST00000479707 RPL37AP61513 92 aaKnown RBP11.89□□□□□ -0.51
AGRN-208ENST00000479707 GAGE2EQ4V326 116 aa11.89□□□□□ -0.51
AGRN-208ENST00000479707 Q6ZRP5 223 aa11.89□□□□□ -0.51
AGRN-208ENST00000479707 GAGE2DQ9UEU5 116 aa11.89□□□□□ -0.51
AGRN-208ENST00000479707 A0A1W2PNN7 141 aa11.88□□□□□ -0.51
AGRN-208ENST00000479707 HIST1H2BKO60814 126 aa11.88□□□□□ -0.51
AGRN-208ENST00000479707 HIST1H2BJP06899 126 aa11.88□□□□□ -0.51
AGRN-208ENST00000479707 FABP4P15090 132 aa11.88□□□□□ -0.51
AGRN-208ENST00000479707 HIST1H2BOP23527 126 aa11.88□□□□□ -0.51
AGRN-208ENST00000479707 HIST1H2BBP33778 126 aa11.88□□□□□ -0.51
AGRN-208ENST00000479707 HIST1H2BDP58876 126 aa11.88□□□□□ -0.51
AGRN-208ENST00000479707 HIST1H2BCP62807 126 aa11.88□□□□□ -0.51
AGRN-208ENST00000479707 HIST2H2BEQ16778 126 aa11.88□□□□□ -0.51
AGRN-208ENST00000479707 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.88□□□□□ -0.51
AGRN-208ENST00000479707 TMEM170BQ5T4T1 132 aa11.88□□□□□ -0.51
AGRN-208ENST00000479707 HIST1H2BHQ93079 126 aa11.88□□□□□ -0.51
AGRN-208ENST00000479707 HIST1H2BNQ99877 126 aa11.88□□□□□ -0.51
AGRN-208ENST00000479707 HIST1H2BMQ99879 126 aa11.88□□□□□ -0.51
AGRN-208ENST00000479707 TRAV12-1A0A0B4J245 112 aa11.87□□□□□ -0.51
AGRN-208ENST00000479707 TLX1NBP0CAT3 122 aa11.87□□□□□ -0.51
AGRN-208ENST00000479707 F8VRH5 84 aa11.86□□□□□ -0.51
AGRN-208ENST00000479707 KRTAP10-4P60372 401 aaPredicted RBP11.85□□□□□ -0.51
AGRN-208ENST00000479707 NDUFC2-KCTD14E9PQ53 114 aa11.84□□□□□ -0.51
AGRN-208ENST00000479707 CXCL5P42830 114 aa11.84□□□□□ -0.51
AGRN-208ENST00000479707 C7orf33Q8WU49 177 aa11.84□□□□□ -0.51
AGRN-208ENST00000479707 HSPB8Q9UJY1 196 aa11.83□□□□□ -0.52
AGRN-208ENST00000479707 IGLV5-39A0A0G2JS06 123 aa11.82□□□□□ -0.52
AGRN-208ENST00000479707 FAM168BA1KXE4 195 aa11.82□□□□□ -0.52
AGRN-208ENST00000479707 SRRM2Q9UQ35 2752 aaKnown RBP11.81□□□□□ -0.52
AGRN-208ENST00000479707 ODF1Q14990 250 aa11.8□□□□□ -0.52
AGRN-208ENST00000479707 FAM19A5Q7Z5A7 132 aaPredicted RBP11.8□□□□□ -0.52
AGRN-208ENST00000479707 TMEM223A0PJW6 202 aa11.79□□□□□ -0.52
AGRN-208ENST00000479707 C9orf129Q5T035 196 aaKnown RBP11.79□□□□□ -0.52
AGRN-208ENST00000479707 PHF5AQ7RTV0 110 aaKnown RBP11.79□□□□□ -0.52
AGRN-208ENST00000479707 PMCHL2Q9BQD1 86 aa11.78□□□□□ -0.52
AGRN-208ENST00000479707 XAGE1AQ9HD64 81 aa11.78□□□□□ -0.52
AGRN-208ENST00000479707 HNRNPA3P51991 378 aaKnown RBP11.77□□□□□ -0.53
AGRN-208ENST00000479707 FLG2Q5D862 2391 aaPredicted RBP11.76□□□□□ -0.53
AGRN-208ENST00000479707 ZNF625Q96I27 306 aaPredicted RBP11.76□□□□□ -0.53
AGRN-208ENST00000479707 MAP1LC3CQ9BXW4 147 aa11.76□□□□□ -0.53
AGRN-208ENST00000479707 KRTAP7-1Q8IUC3 87 aa11.75□□□□□ -0.53
AGRN-208ENST00000479707 PFN2P35080 140 aa11.74□□□□□ -0.53
AGRN-208ENST00000479707 PRR3P79522 188 aaKnown RBP11.73□□□□□ -0.53
AGRN-208ENST00000479707 DPM2O94777 84 aa11.72□□□□□ -0.53
AGRN-208ENST00000479707 SERTAD4-AS1Q5TG53 156 aa11.72□□□□□ -0.53
AGRN-208ENST00000479707 M0QXV9 152 aa11.71□□□□□ -0.53
AGRN-208ENST00000479707 PLNP26678 52 aa11.71□□□□□ -0.53
AGRN-208ENST00000479707 COA6Q5JTJ3 125 aaKnown RBP11.71□□□□□ -0.53
AGRN-208ENST00000479707 ERG28Q9UKR5 140 aa11.71□□□□□ -0.53
AGRN-208ENST00000479707 IGKCP01834 107 aa11.7□□□□□ -0.54
AGRN-208ENST00000479707 SYS1-DBNDD2H3BUS1 97 aa11.69□□□□□ -0.54
AGRN-208ENST00000479707 KRTAP11-1Q8IUC1 163 aa11.68□□□□□ -0.54
AGRN-208ENST00000479707 PSORS1C2Q9UIG4 136 aa11.68□□□□□ -0.54
AGRN-208ENST00000479707 C22orf24Q9Y442 160 aa11.68□□□□□ -0.54
AGRN-208ENST00000479707 PKHD1L1Q86WI1 4243 aa11.67□□□□□ -0.54
AGRN-208ENST00000479707 A0A0U1RRA0 63 aa11.67□□□□□ -0.54
AGRN-208ENST00000479707 UBE2BP63146 152 aa11.67□□□□□ -0.54
AGRN-208ENST00000479707 SFTA2Q6UW10 78 aa11.67□□□□□ -0.54
AGRN-208ENST00000479707 LEPROTO15243 131 aa11.65□□□□□ -0.54
AGRN-208ENST00000479707 LINC00158P58513 81 aa11.65□□□□□ -0.54
AGRN-208ENST00000479707 HERVK_113P61574 105 aa11.65□□□□□ -0.54
AGRN-208ENST00000479707 C1orf137Q5JT78 98 aa11.65□□□□□ -0.54
AGRN-208ENST00000479707 NDUFA12Q9UI09 145 aa11.65□□□□□ -0.54
AGRN-208ENST00000479707 MYCBP2O75592 4640 aa11.65□□□□□ -0.54
AGRN-208ENST00000479707 C3orf79P0CE67 100 aa11.64□□□□□ -0.55
AGRN-208ENST00000479707 TSPEAR-AS2P59090 65 aa11.64□□□□□ -0.55
AGRN-208ENST00000479707 KRTDAPP60985 99 aa11.64□□□□□ -0.55
AGRN-208ENST00000479707 COX17Q14061 63 aa11.64□□□□□ -0.55
AGRN-208ENST00000479707 PET117Q6UWS5 81 aa11.64□□□□□ -0.55
AGRN-208ENST00000479707 SND1-IT1Q9HBX3 110 aa11.64□□□□□ -0.55
AGRN-208ENST00000479707 MEIG1Q5JSS6 88 aa11.63□□□□□ -0.55
AGRN-208ENST00000479707 PLEKHB2Q96CS7 222 aa11.63□□□□□ -0.55
AGRN-208ENST00000479707 MYMXA0A1B0GTQ4 84 aa11.62□□□□□ -0.55
AGRN-208ENST00000479707 SMIM13P0DJ93 91 aa11.62□□□□□ -0.55
AGRN-208ENST00000479707 LINC01545Q5VT33 79 aa11.62□□□□□ -0.55
AGRN-208ENST00000479707 J3QL48 77 aa11.61□□□□□ -0.55
AGRN-208ENST00000479707 J3QQQ9 107 aa11.61□□□□□ -0.55
AGRN-208ENST00000479707 LBHQ53QV2 105 aaPredicted RBP11.61□□□□□ -0.55
AGRN-208ENST00000479707 PLA2G2DQ9UNK4 145 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms