RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 KIAA0087Q14695 138 aa9.85□□□□□ -0.83
C9orf3-217ENST00000479161 ZC2HC1BQ5TFG8 222 aa9.85□□□□□ -0.83
C9orf3-217ENST00000479161 Q6ZRU5 148 aa9.85□□□□□ -0.83
C9orf3-217ENST00000479161 LINC00526Q96FQ7 95 aa9.85□□□□□ -0.83
C9orf3-217ENST00000479161 PLAC8Q9NZF1 115 aa9.85□□□□□ -0.83
C9orf3-217ENST00000479161 PANO1I0J062 215 aa9.84□□□□□ -0.83
C9orf3-217ENST00000479161 NDUFA1O15239 70 aa9.84□□□□□ -0.83
C9orf3-217ENST00000479161 ATP5LO75964 103 aa9.84□□□□□ -0.83
C9orf3-217ENST00000479161 DDTP30046 118 aa9.84□□□□□ -0.83
C9orf3-217ENST00000479161 BAGE3Q86Y29 109 aa9.84□□□□□ -0.83
C9orf3-217ENST00000479161 LINC00528Q8N1L1 170 aa9.84□□□□□ -0.83
C9orf3-217ENST00000479161 GEMIN7Q9H840 131 aaKnown RBP9.84□□□□□ -0.83
C9orf3-217ENST00000479161 LOC107984640A0A0U1RRK4 108 aa9.83□□□□□ -0.84
C9orf3-217ENST00000479161 SERF1AO75920 110 aa9.83□□□□□ -0.84
C9orf3-217ENST00000479161 TLX1NBP0CAT3 122 aa9.83□□□□□ -0.84
C9orf3-217ENST00000479161 LINC00310P59036 64 aa9.83□□□□□ -0.84
C9orf3-217ENST00000479161 LBHQ53QV2 105 aaPredicted RBP9.83□□□□□ -0.84
C9orf3-217ENST00000479161 A0A087WYN8 130 aa9.82□□□□□ -0.84
C9orf3-217ENST00000479161 Q8IZM0 81 aa9.82□□□□□ -0.84
C9orf3-217ENST00000479161 CDKN2A-AS1Q9UH64 79 aa9.82□□□□□ -0.84
C9orf3-217ENST00000479161 A0A096LNI7 61 aa9.81□□□□□ -0.84
C9orf3-217ENST00000479161 A0A0J9YXV3 536 aa9.81□□□□□ -0.84
C9orf3-217ENST00000479161 TRBV30A0A0K0K1B3 111 aa9.81□□□□□ -0.84
C9orf3-217ENST00000479161 NUPR1O60356 82 aa9.8□□□□□ -0.84
C9orf3-217ENST00000479161 CHTF8P0CG12 524 aa9.8□□□□□ -0.84
C9orf3-217ENST00000479161 PTTG1IPP53801 180 aa9.8□□□□□ -0.84
C9orf3-217ENST00000479161 DPH3Q96FX2 82 aa9.8□□□□□ -0.84
C9orf3-217ENST00000479161 SCGB1D1O95968 90 aa9.79□□□□□ -0.84
C9orf3-217ENST00000479161 IGLC3P0DOY3 106 aa9.79□□□□□ -0.84
C9orf3-217ENST00000479161 C14orf144Q96I85 54 aa9.79□□□□□ -0.84
C9orf3-217ENST00000479161 PRSS2P07478 247 aa9.78□□□□□ -0.84
C9orf3-217ENST00000479161 CXCL5P42830 114 aa9.78□□□□□ -0.84
C9orf3-217ENST00000479161 KRTAP10-4P60372 401 aaPredicted RBP9.78□□□□□ -0.84
C9orf3-217ENST00000479161 MAJINQ3KP22 176 aa9.78□□□□□ -0.84
C9orf3-217ENST00000479161 UNQ6190/PRO20217Q6UXQ8 127 aa9.78□□□□□ -0.84
C9orf3-217ENST00000479161 LINC00469Q8N7U9 141 aa9.78□□□□□ -0.84
C9orf3-217ENST00000479161 PRO1933Q9H354 126 aa9.78□□□□□ -0.84
C9orf3-217ENST00000479161 IGKV2-24A0A0C4DH68 120 aa9.77□□□□□ -0.85
C9orf3-217ENST00000479161 SMIM1B2RUZ4 78 aa9.77□□□□□ -0.85
C9orf3-217ENST00000479161 H3BRM9 83 aa9.77□□□□□ -0.85
C9orf3-217ENST00000479161 HSBP1O75506 76 aa9.77□□□□□ -0.85
C9orf3-217ENST00000479161 PMCHL1Q16048 86 aa9.77□□□□□ -0.85
C9orf3-217ENST00000479161 C6orf226Q5I0X4 101 aa9.77□□□□□ -0.85
C9orf3-217ENST00000479161 C10orf25Q5T742 122 aa9.77□□□□□ -0.85
C9orf3-217ENST00000479161 C6orf48Q9UBA6 75 aa9.77□□□□□ -0.85
C9orf3-217ENST00000479161 TRAV12-1A0A0B4J245 112 aa9.76□□□□□ -0.85
C9orf3-217ENST00000479161 INAFM2P0DMQ5 153 aa9.76□□□□□ -0.85
C9orf3-217ENST00000479161 STPG4Q8N801 248 aa9.76□□□□□ -0.85
C9orf3-217ENST00000479161 HERC1Q15751 4861 aa9.76□□□□□ -0.85
C9orf3-217ENST00000479161 CKS1BP61024 79 aa9.75□□□□□ -0.85
C9orf3-217ENST00000479161 ODF1Q14990 250 aa9.75□□□□□ -0.85
C9orf3-217ENST00000479161 IFI27L1Q96BM0 104 aa9.75□□□□□ -0.85
C9orf3-217ENST00000479161 NDUFC2-KCTD14E9PQ53 114 aa9.74□□□□□ -0.85
C9orf3-217ENST00000479161 FLG2Q5D862 2391 aaPredicted RBP9.74□□□□□ -0.85
C9orf3-217ENST00000479161 IGLV5-39A0A0G2JS06 123 aa9.73□□□□□ -0.85
C9orf3-217ENST00000479161 F8VRH5 84 aa9.73□□□□□ -0.85
C9orf3-217ENST00000479161 RPL37AP61513 92 aaKnown RBP9.73□□□□□ -0.85
C9orf3-217ENST00000479161 GAGE2BQ13066 116 aa9.73□□□□□ -0.85
C9orf3-217ENST00000479161 C2orf82Q6UX34 121 aa9.73□□□□□ -0.85
C9orf3-217ENST00000479161 C7orf33Q8WU49 177 aa9.73□□□□□ -0.85
C9orf3-217ENST00000479161 Q6ZRP5 223 aa9.72□□□□□ -0.85
C9orf3-217ENST00000479161 COX7B2Q8TF08 81 aa9.72□□□□□ -0.85
C9orf3-217ENST00000479161 VAMP8Q9BV40 100 aa9.72□□□□□ -0.85
C9orf3-217ENST00000479161 TOMM7Q9P0U1 55 aa9.72□□□□□ -0.85
C9orf3-217ENST00000479161 ZNF22P17026 224 aaPredicted RBP9.71□□□□□ -0.86
C9orf3-217ENST00000479161 RPL18AQ02543 176 aaKnown RBP9.71□□□□□ -0.86
C9orf3-217ENST00000479161 C20orf202A1L168 122 aa9.7□□□□□ -0.86
C9orf3-217ENST00000479161 LEPROTL1O95214 131 aa9.7□□□□□ -0.86
C9orf3-217ENST00000479161 SFTA2Q6UW10 78 aa9.7□□□□□ -0.86
C9orf3-217ENST00000479161 FAM19A2Q8N3H0 131 aa9.7□□□□□ -0.86
C9orf3-217ENST00000479161 CHTOPQ9Y3Y2 248 aaKnown RBP9.7□□□□□ -0.86
C9orf3-217ENST00000479161 KRTDAPP60985 99 aa9.69□□□□□ -0.86
C9orf3-217ENST00000479161 C9orf116Q5BN46 136 aaPredicted RBP9.69□□□□□ -0.86
C9orf3-217ENST00000479161 MIEN1Q9BRT3 115 aa9.69□□□□□ -0.86
C9orf3-217ENST00000479161 HSPB8Q9UJY1 196 aa9.69□□□□□ -0.86
C9orf3-217ENST00000479161 A0A1W2PNN7 141 aa9.68□□□□□ -0.86
C9orf3-217ENST00000479161 C11orf86A6NJI1 115 aa9.68□□□□□ -0.86
C9orf3-217ENST00000479161 SPINK8P0C7L1 97 aa9.68□□□□□ -0.86
C9orf3-217ENST00000479161 C3orf79P0CE67 100 aa9.68□□□□□ -0.86
C9orf3-217ENST00000479161 MYCBP2O75592 4640 aa9.68□□□□□ -0.86
C9orf3-217ENST00000479161 M0R143 59 aa9.67□□□□□ -0.86
C9orf3-217ENST00000479161 DMBT1Q9UGM3 2413 aaPredicted RBP9.66□□□□□ -0.86
C9orf3-217ENST00000479161 TMEM170BQ5T4T1 132 aa9.65□□□□□ -0.86
C9orf3-217ENST00000479161 PKHD1L1Q86WI1 4243 aa9.64□□□□□ -0.87
C9orf3-217ENST00000479161 COX17Q14061 63 aa9.64□□□□□ -0.87
C9orf3-217ENST00000479161 GAGE2EQ4V326 116 aa9.64□□□□□ -0.87
C9orf3-217ENST00000479161 UQCR10Q9UDW1 63 aa9.64□□□□□ -0.87
C9orf3-217ENST00000479161 GAGE2DQ9UEU5 116 aa9.64□□□□□ -0.87
C9orf3-217ENST00000479161 PAM16Q9Y3D7 125 aa9.64□□□□□ -0.87
C9orf3-217ENST00000479161 TMEM223A0PJW6 202 aa9.63□□□□□ -0.87
C9orf3-217ENST00000479161 PRR3P79522 188 aaKnown RBP9.63□□□□□ -0.87
C9orf3-217ENST00000479161 SPATA45Q537H7 98 aa9.63□□□□□ -0.87
C9orf3-217ENST00000479161 C9orf129Q5T035 196 aaKnown RBP9.63□□□□□ -0.87
C9orf3-217ENST00000479161 KRTAP29-1A8MX34 341 aaPredicted RBP9.62□□□□□ -0.87
C9orf3-217ENST00000479161 PLNP26678 52 aa9.62□□□□□ -0.87
C9orf3-217ENST00000479161 SNHG12Q9BXW3 62 aa9.62□□□□□ -0.87
C9orf3-217ENST00000479161 PLA2G2DQ9UNK4 145 aa9.62□□□□□ -0.87
C9orf3-217ENST00000479161 OXTP01178 125 aa9.61□□□□□ -0.87
C9orf3-217ENST00000479161 PET117Q6UWS5 81 aa9.61□□□□□ -0.87
C9orf3-217ENST00000479161 ZNF625Q96I27 306 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms