RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 UNQ6190/PRO20217Q6UXQ8 127 aa5.78□□□□□ -1.48
CCM2-210ENST00000478169 FAM19A5Q7Z5A7 132 aaPredicted RBP5.78□□□□□ -1.48
CCM2-210ENST00000478169 PACRGQ96M98 296 aaPredicted RBP5.78□□□□□ -1.48
CCM2-210ENST00000478169 RPL32P62910 135 aaKnown RBP5.77□□□□□ -1.49
CCM2-210ENST00000478169 UBE2BP63146 152 aa5.77□□□□□ -1.49
CCM2-210ENST00000478169 GAGE2EQ4V326 116 aa5.77□□□□□ -1.49
CCM2-210ENST00000478169 LINC01551Q86U37 167 aa5.77□□□□□ -1.49
CCM2-210ENST00000478169 HIST3H2BBQ8N257 126 aa5.77□□□□□ -1.49
CCM2-210ENST00000478169 C20orf78Q9BR46 151 aa5.77□□□□□ -1.49
CCM2-210ENST00000478169 OSTCQ9NRP0 149 aa5.77□□□□□ -1.49
CCM2-210ENST00000478169 C6orf48Q9UBA6 75 aa5.77□□□□□ -1.49
CCM2-210ENST00000478169 GAGE2DQ9UEU5 116 aa5.77□□□□□ -1.49
CCM2-210ENST00000478169 TRAPPC1Q9Y5R8 145 aa5.77□□□□□ -1.49
CCM2-210ENST00000478169 M0QXV9 152 aa5.76□□□□□ -1.49
CCM2-210ENST00000478169 FABP4P15090 132 aa5.76□□□□□ -1.49
CCM2-210ENST00000478169 MRPS36P82909 103 aaKnown RBP5.76□□□□□ -1.49
CCM2-210ENST00000478169 JOSD1Q15040 202 aaPredicted RBP5.76□□□□□ -1.49
CCM2-210ENST00000478169 KRTAP7-1Q8IUC3 87 aa5.76□□□□□ -1.49
CCM2-210ENST00000478169 FAM104AQ969W3 186 aa5.76□□□□□ -1.49
CCM2-210ENST00000478169 KRTAP4-8Q9BYQ9 185 aa5.76□□□□□ -1.49
CCM2-210ENST00000478169 SPANXA1Q9NS26 97 aa5.76□□□□□ -1.49
CCM2-210ENST00000478169 TRBV30A0A0K0K1B3 111 aa5.75□□□□□ -1.49
CCM2-210ENST00000478169 RPL39P62891 51 aaKnown RBP5.75□□□□□ -1.49
CCM2-210ENST00000478169 HBBP68871 147 aa5.75□□□□□ -1.49
CCM2-210ENST00000478169 MRPL51Q4U2R6 128 aaKnown RBP5.75□□□□□ -1.49
CCM2-210ENST00000478169 FAM104BQ5XKR9 115 aa5.75□□□□□ -1.49
CCM2-210ENST00000478169 IFITM10A6NMD0 228 aa5.74□□□□□ -1.49
CCM2-210ENST00000478169 NDUFC2-KCTD14E9PQ53 114 aa5.74□□□□□ -1.49
CCM2-210ENST00000478169 ZNF861PO60384 105 aa5.74□□□□□ -1.49
CCM2-210ENST00000478169 KIAA0087Q14695 138 aa5.74□□□□□ -1.49
CCM2-210ENST00000478169 GNB1LQ9BYB4 327 aa5.74□□□□□ -1.49
CCM2-210ENST00000478169 NAT8BQ9UHF3 227 aa5.74□□□□□ -1.49
CCM2-210ENST00000478169 V9GYV3 84 aa5.74□□□□□ -1.49
CCM2-210ENST00000478169 CKS2P33552 79 aa5.73□□□□□ -1.49
CCM2-210ENST00000478169 C9orf129Q5T035 196 aaKnown RBP5.73□□□□□ -1.49
CCM2-210ENST00000478169 HIST1H2BLQ99880 126 aa5.73□□□□□ -1.49
CCM2-210ENST00000478169 SMIM2Q9BVW6 85 aa5.73□□□□□ -1.49
CCM2-210ENST00000478169 A0A1B0GW15 77 aa5.72□□□□□ -1.49
CCM2-210ENST00000478169 NUPR1O60356 82 aa5.72□□□□□ -1.49
CCM2-210ENST00000478169 TNFRSF6BO95407 300 aa5.72□□□□□ -1.49
CCM2-210ENST00000478169 PYY3Q5JQD4 70 aa5.72□□□□□ -1.49
CCM2-210ENST00000478169 TSPAN13O95857 204 aa5.71□□□□□ -1.5
CCM2-210ENST00000478169 LINC00242Q5T6M2 205 aa5.71□□□□□ -1.5
CCM2-210ENST00000478169 C2orf82Q6UX34 121 aa5.71□□□□□ -1.5
CCM2-210ENST00000478169 ATP5L2Q7Z4Y8 100 aa5.71□□□□□ -1.5
CCM2-210ENST00000478169 BAGE3Q86Y29 109 aa5.71□□□□□ -1.5
CCM2-210ENST00000478169 LINC01561Q8N1V8 128 aa5.71□□□□□ -1.5
CCM2-210ENST00000478169 PYGO1Q9Y3Y4 419 aa5.71□□□□□ -1.5
CCM2-210ENST00000478169 SMIM27A0A1W2PRY6 76 aa5.7□□□□□ -1.5
CCM2-210ENST00000478169 SCGB1D1O95968 90 aa5.7□□□□□ -1.5
CCM2-210ENST00000478169 DDTP30046 118 aa5.7□□□□□ -1.5
CCM2-210ENST00000478169 IFI27P40305 119 aaPredicted RBP5.7□□□□□ -1.5
CCM2-210ENST00000478169 PDZD11Q5EBL8 140 aa5.7□□□□□ -1.5
CCM2-210ENST00000478169 LINC00587B1AMM8 73 aa5.69□□□□□ -1.5
CCM2-210ENST00000478169 D6R8Y8 96 aa5.69□□□□□ -1.5
CCM2-210ENST00000478169 PPBPP02775 128 aa5.69□□□□□ -1.5
CCM2-210ENST00000478169 MRPL18Q9H0U6 180 aaKnown RBP5.69□□□□□ -1.5
CCM2-210ENST00000478169 C22orf24Q9Y442 160 aa5.69□□□□□ -1.5
CCM2-210ENST00000478169 IGLV4-3A0A075B6K6 122 aa5.68□□□□□ -1.5
CCM2-210ENST00000478169 KRTAP9-6A0A140TA67 174 aa5.68□□□□□ -1.5
CCM2-210ENST00000478169 NPYP01303 97 aa5.68□□□□□ -1.5
CCM2-210ENST00000478169 CRYGAP11844 174 aa5.68□□□□□ -1.5
CCM2-210ENST00000478169 RPL28P46779 137 aaKnown RBP5.68□□□□□ -1.5
CCM2-210ENST00000478169 TMEM141Q96I45 108 aa5.68□□□□□ -1.5
CCM2-210ENST00000478169 A0A087X002 238 aa5.67□□□□□ -1.5
CCM2-210ENST00000478169 C20orf202A1L168 122 aa5.67□□□□□ -1.5
CCM2-210ENST00000478169 PRSS2P07478 247 aa5.67□□□□□ -1.5
CCM2-210ENST00000478169 CKS1BP61024 79 aa5.67□□□□□ -1.5
CCM2-210ENST00000478169 PMCHL1Q16048 86 aa5.67□□□□□ -1.5
CCM2-210ENST00000478169 TEX43Q6ZNM6 134 aa5.67□□□□□ -1.5
CCM2-210ENST00000478169 TYMSOSQ8TAI1 123 aa5.67□□□□□ -1.5
CCM2-210ENST00000478169 TP73-AS1Q9UF72 201 aa5.67□□□□□ -1.5
CCM2-210ENST00000478169 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.66□□□□□ -1.5
CCM2-210ENST00000478169 C6orf226Q5I0X4 101 aa5.66□□□□□ -1.5
CCM2-210ENST00000478169 Q6ZN92 141 aa5.66□□□□□ -1.5
CCM2-210ENST00000478169 Q8IZM0 81 aa5.66□□□□□ -1.5
CCM2-210ENST00000478169 C2orf88Q9BSF0 95 aa5.66□□□□□ -1.5
CCM2-210ENST00000478169 VAMP8Q9BV40 100 aa5.66□□□□□ -1.5
CCM2-210ENST00000478169 A0A1B0GXF2 115 aa5.65□□□□□ -1.5
CCM2-210ENST00000478169 PRSS47A8MTI9 375 aa5.65□□□□□ -1.5
CCM2-210ENST00000478169 M0R143 59 aa5.65□□□□□ -1.5
CCM2-210ENST00000478169 BCE1O60756 84 aa5.65□□□□□ -1.5
CCM2-210ENST00000478169 MRPL54Q6P161 138 aaKnown RBP5.65□□□□□ -1.5
CCM2-210ENST00000478169 TMEM136Q6ZRR5 245 aa5.65□□□□□ -1.5
CCM2-210ENST00000478169 MRPL55Q7Z7F7 128 aaKnown RBP5.65□□□□□ -1.5
CCM2-210ENST00000478169 ORMDL3Q8N138 153 aa5.65□□□□□ -1.5
CCM2-210ENST00000478169 LINC00469Q8N7U9 141 aa5.65□□□□□ -1.5
CCM2-210ENST00000478169 SVIPQ8NHG7 77 aa5.65□□□□□ -1.5
CCM2-210ENST00000478169 XAGE1AQ9HD64 81 aa5.65□□□□□ -1.5
CCM2-210ENST00000478169 TOMM7Q9P0U1 55 aa5.65□□□□□ -1.5
CCM2-210ENST00000478169 MUC17Q685J3 4493 aa5.65□□□□□ -1.51
CCM2-210ENST00000478169 HSBP1O75506 76 aa5.64□□□□□ -1.51
CCM2-210ENST00000478169 FAM19A3Q7Z5A8 133 aa5.64□□□□□ -1.51
CCM2-210ENST00000478169 PRELID3AQ96N28 172 aa5.64□□□□□ -1.51
CCM2-210ENST00000478169 AMELXQ99217 191 aa5.64□□□□□ -1.51
CCM2-210ENST00000478169 VCX2Q9H322 139 aa5.64□□□□□ -1.51
CCM2-210ENST00000478169 F8VRH5 84 aa5.63□□□□□ -1.51
CCM2-210ENST00000478169 GHRHP01286 108 aa5.63□□□□□ -1.51
CCM2-210ENST00000478169 NPSP0C0P6 89 aa5.63□□□□□ -1.51
CCM2-210ENST00000478169 TPRXLQ17RH7 258 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms