RNA–Protein interactions for RNA: ENST00000476086.6

NR1H3-219, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-219ENST00000476086 CDPF1Q6NVV7 123 aa12.42□□□□□ -0.42
NR1H3-219ENST00000476086 CNBPP62633 177 aaKnown RBP12.41□□□□□ -0.42
NR1H3-219ENST00000476086 C2orf82Q6UX34 121 aa12.41□□□□□ -0.42
NR1H3-219ENST00000476086 ZNF625Q96I27 306 aaPredicted RBP12.41□□□□□ -0.42
NR1H3-219ENST00000476086 CARD19Q96LW7 228 aa12.41□□□□□ -0.42
NR1H3-219ENST00000476086 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.4□□□□□ -0.42
NR1H3-219ENST00000476086 TRBV30A0A0K0K1B3 111 aa12.4□□□□□ -0.42
NR1H3-219ENST00000476086 ZNF815PA8K554 130 aa12.4□□□□□ -0.42
NR1H3-219ENST00000476086 LINC00587B1AMM8 73 aa12.39□□□□□ -0.43
NR1H3-219ENST00000476086 RNF151Q2KHN1 245 aa12.39□□□□□ -0.43
NR1H3-219ENST00000476086 UNQ6190/PRO20217Q6UXQ8 127 aa12.39□□□□□ -0.43
NR1H3-219ENST00000476086 COX8AP10176 69 aa12.38□□□□□ -0.43
NR1H3-219ENST00000476086 Q6ZRU5 148 aa12.38□□□□□ -0.43
NR1H3-219ENST00000476086 C12orf57Q99622 126 aa12.38□□□□□ -0.43
NR1H3-219ENST00000476086 PKIGQ9Y2B9 76 aa12.37□□□□□ -0.43
NR1H3-219ENST00000476086 SACSQ9NZJ4 4579 aa12.36□□□□□ -0.43
NR1H3-219ENST00000476086 SLPIP03973 132 aa12.36□□□□□ -0.43
NR1H3-219ENST00000476086 PCP2Q8IVA1 136 aa12.36□□□□□ -0.43
NR1H3-219ENST00000476086 HYDINQ4G0P3 5121 aa12.35□□□□□ -0.43
NR1H3-219ENST00000476086 CIRBPQ14011 172 aaKnown RBP12.35□□□□□ -0.43
NR1H3-219ENST00000476086 COX17Q14061 63 aa12.35□□□□□ -0.43
NR1H3-219ENST00000476086 C10orf25Q5T742 122 aa12.35□□□□□ -0.43
NR1H3-219ENST00000476086 SCGB1D4Q6XE38 83 aa12.35□□□□□ -0.43
NR1H3-219ENST00000476086 TTTY13Q9BZ97 58 aa12.35□□□□□ -0.43
NR1H3-219ENST00000476086 PGPEP1Q9NXJ5 209 aa12.35□□□□□ -0.43
NR1H3-219ENST00000476086 DLEU1O43261 78 aa12.34□□□□□ -0.43
NR1H3-219ENST00000476086 MEIG1Q5JSS6 88 aa12.34□□□□□ -0.43
NR1H3-219ENST00000476086 SLC25A34Q6PIV7 304 aa12.34□□□□□ -0.43
NR1H3-219ENST00000476086 BOD1L2Q8IYS8 172 aa12.34□□□□□ -0.43
NR1H3-219ENST00000476086 C14orf144Q96I85 54 aa12.34□□□□□ -0.43
NR1H3-219ENST00000476086 C6orf48Q9UBA6 75 aa12.34□□□□□ -0.43
NR1H3-219ENST00000476086 IGLV5-52A0A0A0MRZ9 124 aa12.33□□□□□ -0.44
NR1H3-219ENST00000476086 LINC00518Q8N0U6 118 aa12.33□□□□□ -0.44
NR1H3-219ENST00000476086 C9orf163Q8N9P6 203 aa12.33□□□□□ -0.44
NR1H3-219ENST00000476086 ERG28Q9UKR5 140 aa12.33□□□□□ -0.44
NR1H3-219ENST00000476086 A0A0J9YXY3 114 aa12.32□□□□□ -0.44
NR1H3-219ENST00000476086 KMT2CQ8NEZ4 4911 aaKnown RBP12.31□□□□□ -0.44
NR1H3-219ENST00000476086 LOC107984640A0A0U1RRK4 108 aa12.3□□□□□ -0.44
NR1H3-219ENST00000476086 TIMM17BO60830 172 aa12.3□□□□□ -0.44
NR1H3-219ENST00000476086 LINC00158P58513 81 aa12.3□□□□□ -0.44
NR1H3-219ENST00000476086 NDUFC2-KCTD14E9PQ53 114 aa12.29□□□□□ -0.44
NR1H3-219ENST00000476086 TLX1NBP0CAT3 122 aa12.29□□□□□ -0.44
NR1H3-219ENST00000476086 PFN2P35080 140 aa12.29□□□□□ -0.44
NR1H3-219ENST00000476086 C9orf116Q5BN46 136 aaPredicted RBP12.29□□□□□ -0.44
NR1H3-219ENST00000476086 UQCR10Q9UDW1 63 aa12.29□□□□□ -0.44
NR1H3-219ENST00000476086 DNAH10Q8IVF4 4471 aa12.29□□□□□ -0.44
NR1H3-219ENST00000476086 TMEM238C9JI98 176 aa12.28□□□□□ -0.44
NR1H3-219ENST00000476086 TSTD3H0UI37 97 aa12.27□□□□□ -0.45
NR1H3-219ENST00000476086 SMIM13P0DJ93 91 aa12.27□□□□□ -0.45
NR1H3-219ENST00000476086 RYR2Q92736 4967 aa12.26□□□□□ -0.45
NR1H3-219ENST00000476086 GCSHP23434 173 aa12.26□□□□□ -0.45
NR1H3-219ENST00000476086 DNAH2Q9P225 4427 aa12.25□□□□□ -0.45
NR1H3-219ENST00000476086 KRTAP10-2P60368 255 aa12.25□□□□□ -0.45
NR1H3-219ENST00000476086 RPL18AQ02543 176 aaKnown RBP12.25□□□□□ -0.45
NR1H3-219ENST00000476086 A0A0U1RRA0 63 aa12.24□□□□□ -0.45
NR1H3-219ENST00000476086 Q6ZVH6 145 aa12.24□□□□□ -0.45
NR1H3-219ENST00000476086 PRO1933Q9H354 126 aa12.24□□□□□ -0.45
NR1H3-219ENST00000476086 HIGD1BQ9P298 99 aa12.24□□□□□ -0.45
NR1H3-219ENST00000476086 A0A1B0GVY2 172 aa12.23□□□□□ -0.45
NR1H3-219ENST00000476086 COPS9Q8WXC6 57 aa12.23□□□□□ -0.45
NR1H3-219ENST00000476086 MIEN1Q9BRT3 115 aa12.23□□□□□ -0.45
NR1H3-219ENST00000476086 LINC00474Q9P2X8 69 aa12.23□□□□□ -0.45
NR1H3-219ENST00000476086 FRAS1Q86XX4 4008 aa12.23□□□□□ -0.45
NR1H3-219ENST00000476086 C16orf90A8MZG2 172 aa12.22□□□□□ -0.45
NR1H3-219ENST00000476086 SDIM1Q6ZPB5 146 aa12.22□□□□□ -0.45
NR1H3-219ENST00000476086 Q6ZRP5 223 aa12.22□□□□□ -0.45
NR1H3-219ENST00000476086 MIR7-3HGQ8N6C7 128 aa12.22□□□□□ -0.45
NR1H3-219ENST00000476086 SPANXDQ9BXN6 97 aa12.22□□□□□ -0.45
NR1H3-219ENST00000476086 SPANXB1Q9NS25 103 aaPredicted RBP12.22□□□□□ -0.45
NR1H3-219ENST00000476086 SPANXCQ9NY87 97 aa12.22□□□□□ -0.45
NR1H3-219ENST00000476086 DNAH17Q9UFH2 4485 aa12.21□□□□□ -0.45
NR1H3-219ENST00000476086 FUSP35637 526 aaKnown RBP eCLIP12.21□□□□□ -0.45
NR1H3-219ENST00000476086 GAGE2BQ13066 116 aa12.21□□□□□ -0.45
NR1H3-219ENST00000476086 SRSF9Q13242 221 aaKnown RBP eCLIP12.21□□□□□ -0.45
NR1H3-219ENST00000476086 GAGE2EQ4V326 116 aa12.21□□□□□ -0.45
NR1H3-219ENST00000476086 LITAFQ99732 161 aa12.21□□□□□ -0.45
NR1H3-219ENST00000476086 GAGE2DQ9UEU5 116 aa12.21□□□□□ -0.45
NR1H3-219ENST00000476086 PTTG1IPP53801 180 aa12.2□□□□□ -0.46
NR1H3-219ENST00000476086 LINC01620Q4KN68 170 aa12.2□□□□□ -0.46
NR1H3-219ENST00000476086 TP73-AS1Q9UF72 201 aa12.2□□□□□ -0.46
NR1H3-219ENST00000476086 ADAMTSL4-AS1Q5T5F5 129 aa12.19□□□□□ -0.46
NR1H3-219ENST00000476086 SND1-IT1Q9HBX3 110 aa12.19□□□□□ -0.46
NR1H3-219ENST00000476086 IFITM1P13164 125 aa12.18□□□□□ -0.46
NR1H3-219ENST00000476086 HNRNPA3P51991 378 aaKnown RBP12.18□□□□□ -0.46
NR1H3-219ENST00000476086 C2orf91Q6ZV80 131 aa12.18□□□□□ -0.46
NR1H3-219ENST00000476086 DAND5Q8N907 189 aa12.18□□□□□ -0.46
NR1H3-219ENST00000476086 HIST1H4GQ99525 98 aa12.18□□□□□ -0.46
NR1H3-219ENST00000476086 A0A096LNI7 61 aa12.17□□□□□ -0.46
NR1H3-219ENST00000476086 IGKV2-24A0A0C4DH68 120 aa12.16□□□□□ -0.46
NR1H3-219ENST00000476086 TAL2Q16559 108 aa12.16□□□□□ -0.46
NR1H3-219ENST00000476086 PPDPFQ9H3Y8 114 aa12.16□□□□□ -0.46
NR1H3-219ENST00000476086 XAGE1AQ9HD64 81 aa12.16□□□□□ -0.46
NR1H3-219ENST00000476086 LOC107984156A0A0G2JMH3 177 aa12.15□□□□□ -0.46
NR1H3-219ENST00000476086 ARL17AQ8IVW1 177 aa12.15□□□□□ -0.46
NR1H3-219ENST00000476086 LINC00308Q8TCZ7 52 aa12.15□□□□□ -0.46
NR1H3-219ENST00000476086 DPH3Q96FX2 82 aa12.13□□□□□ -0.47
NR1H3-219ENST00000476086 NPC2P61916 151 aa12.12□□□□□ -0.47
NR1H3-219ENST00000476086 RPL24P83731 157 aaKnown RBP12.12□□□□□ -0.47
NR1H3-219ENST00000476086 HSD52Q0P140 79 aa12.12□□□□□ -0.47
NR1H3-219ENST00000476086 C9orf129Q5T035 196 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms