RNA–Protein interactions for RNA: ENST00000475534.5

RRP1-204, Transcript of ribosomal RNA processing 1, humanhuman

TSL 3

Gene RRP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-204ENST00000475534 TRAPPC1Q9Y5R8 145 aa13.74□□□□□ -0.21
RRP1-204ENST00000475534 FAM19A5Q7Z5A7 132 aaPredicted RBP13.73□□□□□ -0.21
RRP1-204ENST00000475534 Q8IZM0 81 aa13.73□□□□□ -0.21
RRP1-204ENST00000475534 SVBPQ8N300 66 aa13.73□□□□□ -0.21
RRP1-204ENST00000475534 FAM168BA1KXE4 195 aa13.72□□□□□ -0.21
RRP1-204ENST00000475534 NDUFC2-KCTD14E9PQ53 114 aa13.72□□□□□ -0.21
RRP1-204ENST00000475534 PSORS1C2Q9UIG4 136 aa13.72□□□□□ -0.21
RRP1-204ENST00000475534 REG3GQ6UW15 175 aa13.71□□□□□ -0.21
RRP1-204ENST00000475534 CST9LQ9H4G1 147 aa13.71□□□□□ -0.21
RRP1-204ENST00000475534 PKHD1L1Q86WI1 4243 aa13.7□□□□□ -0.22
RRP1-204ENST00000475534 TINCRA0A1B0GVN0 87 aa13.7□□□□□ -0.22
RRP1-204ENST00000475534 MT1HL1P0DM35 61 aa13.7□□□□□ -0.22
RRP1-204ENST00000475534 PMVKQ15126 192 aa13.69□□□□□ -0.22
RRP1-204ENST00000475534 C1orf137Q5JT78 98 aa13.69□□□□□ -0.22
RRP1-204ENST00000475534 SRSF9Q13242 221 aaKnown RBP eCLIP13.68□□□□□ -0.22
RRP1-204ENST00000475534 NDUFA6P56556 154 aa13.67□□□□□ -0.22
RRP1-204ENST00000475534 FAT3Q8TDW7 4589 aa13.67□□□□□ -0.22
RRP1-204ENST00000475534 F8VRH5 84 aa13.66□□□□□ -0.22
RRP1-204ENST00000475534 LINC00614P0C842 121 aa13.66□□□□□ -0.22
RRP1-204ENST00000475534 C18orf32Q8TCD1 76 aa13.66□□□□□ -0.22
RRP1-204ENST00000475534 LINC01600Q96MT4 127 aa13.66□□□□□ -0.22
RRP1-204ENST00000475534 M0QXV9 152 aa13.65□□□□□ -0.22
RRP1-204ENST00000475534 CXCL5P42830 114 aa13.65□□□□□ -0.22
RRP1-204ENST00000475534 PDZD11Q5EBL8 140 aa13.65□□□□□ -0.22
RRP1-204ENST00000475534 PLA2G2DQ9UNK4 145 aa13.65□□□□□ -0.22
RRP1-204ENST00000475534 SMIM1B2RUZ4 78 aa13.64□□□□□ -0.23
RRP1-204ENST00000475534 RAB5BP61020 215 aa13.64□□□□□ -0.23
RRP1-204ENST00000475534 UBE2BP63146 152 aa13.64□□□□□ -0.23
RRP1-204ENST00000475534 C9orf129Q5T035 196 aaKnown RBP13.64□□□□□ -0.23
RRP1-204ENST00000475534 COX7B2Q8TF08 81 aa13.64□□□□□ -0.23
RRP1-204ENST00000475534 IGLV5-45A0A087WSX0 123 aa13.62□□□□□ -0.23
RRP1-204ENST00000475534 H3BRM9 83 aa13.62□□□□□ -0.23
RRP1-204ENST00000475534 HBDP02042 147 aa13.62□□□□□ -0.23
RRP1-204ENST00000475534 SPINK8P0C7L1 97 aa13.62□□□□□ -0.23
RRP1-204ENST00000475534 XAGE1AQ9HD64 81 aa13.61□□□□□ -0.23
RRP1-204ENST00000475534 PMCHL1Q16048 86 aa13.6□□□□□ -0.23
RRP1-204ENST00000475534 URB1-AS1Q96HZ7 61 aa13.6□□□□□ -0.23
RRP1-204ENST00000475534 KRTAP7-1Q8IUC3 87 aa13.59□□□□□ -0.23
RRP1-204ENST00000475534 A0A096LNJ9 63 aa13.58□□□□□ -0.24
RRP1-204ENST00000475534 IGLV7-43P04211 117 aa13.58□□□□□ -0.24
RRP1-204ENST00000475534 ATP5LO75964 103 aa13.57□□□□□ -0.24
RRP1-204ENST00000475534 KRTAP11-1Q8IUC1 163 aa13.57□□□□□ -0.24
RRP1-204ENST00000475534 DIRC1Q969H9 104 aa13.57□□□□□ -0.24
RRP1-204ENST00000475534 IGLC3P0DOY3 106 aa13.56□□□□□ -0.24
RRP1-204ENST00000475534 LBHQ53QV2 105 aaPredicted RBP13.55□□□□□ -0.24
RRP1-204ENST00000475534 BAGE3Q86Y29 109 aa13.54□□□□□ -0.24
RRP1-204ENST00000475534 C22orf24Q9Y442 160 aa13.54□□□□□ -0.24
RRP1-204ENST00000475534 KRTAP10-8P60410 259 aa13.52□□□□□ -0.25
RRP1-204ENST00000475534 YPEL4Q96NS1 127 aa13.52□□□□□ -0.25
RRP1-204ENST00000475534 ZNF22P17026 224 aaPredicted RBP13.5□□□□□ -0.25
RRP1-204ENST00000475534 CBLN2Q8IUK8 224 aa13.5□□□□□ -0.25
RRP1-204ENST00000475534 CHCHD1Q96BP2 118 aaKnown RBP13.5□□□□□ -0.25
RRP1-204ENST00000475534 TMEM170BQ5T4T1 132 aa13.49□□□□□ -0.25
RRP1-204ENST00000475534 IGLV5-39A0A0G2JS06 123 aa13.48□□□□□ -0.25
RRP1-204ENST00000475534 H0Y9J4 135 aa13.48□□□□□ -0.25
RRP1-204ENST00000475534 MRPL55Q7Z7F7 128 aaKnown RBP13.48□□□□□ -0.25
RRP1-204ENST00000475534 TP73-AS1Q9UF72 201 aa13.47□□□□□ -0.25
RRP1-204ENST00000475534 CHTOPQ9Y3Y2 248 aaKnown RBP13.47□□□□□ -0.25
RRP1-204ENST00000475534 C11orf86A6NJI1 115 aa13.46□□□□□ -0.25
RRP1-204ENST00000475534 PFN2P35080 140 aa13.46□□□□□ -0.25
RRP1-204ENST00000475534 ODF1Q14990 250 aa13.46□□□□□ -0.25
RRP1-204ENST00000475534 NUPR1O60356 82 aa13.45□□□□□ -0.26
RRP1-204ENST00000475534 HSBP1O75506 76 aa13.44□□□□□ -0.26
RRP1-204ENST00000475534 NKAPP1Q8N9T2 125 aa13.44□□□□□ -0.26
RRP1-204ENST00000475534 IFI27L1Q96BM0 104 aa13.44□□□□□ -0.26
RRP1-204ENST00000475534 SLC7A5P1Q8MH63 180 aa13.43□□□□□ -0.26
RRP1-204ENST00000475534 ZNF625Q96I27 306 aaPredicted RBP13.42□□□□□ -0.26
RRP1-204ENST00000475534 GAGE10A6NGK3 116 aa13.41□□□□□ -0.26
RRP1-204ENST00000475534 RPL37AP8A6NKH3 93 aa13.41□□□□□ -0.26
RRP1-204ENST00000475534 TRGC2P03986 189 aa13.41□□□□□ -0.26
RRP1-204ENST00000475534 SFTA2Q6UW10 78 aa13.41□□□□□ -0.26
RRP1-204ENST00000475534 LINC00167Q96N53 147 aa13.41□□□□□ -0.26
RRP1-204ENST00000475534 ERG28Q9UKR5 140 aa13.41□□□□□ -0.26
RRP1-204ENST00000475534 ZNF861PO60384 105 aa13.4□□□□□ -0.26
RRP1-204ENST00000475534 PRR26Q8N8Z3 221 aa13.4□□□□□ -0.26
RRP1-204ENST00000475534 TRAV12-1A0A0B4J245 112 aa13.39□□□□□ -0.27
RRP1-204ENST00000475534 FAM19A2Q8N3H0 131 aa13.39□□□□□ -0.27
RRP1-204ENST00000475534 COX17Q14061 63 aa13.38□□□□□ -0.27
RRP1-204ENST00000475534 HMCN2Q8NDA2 5059 aa13.38□□□□□ -0.27
RRP1-204ENST00000475534 IGLV5-37A0A075B6J1 123 aa13.37□□□□□ -0.27
RRP1-204ENST00000475534 BCE1O60756 84 aa13.36□□□□□ -0.27
RRP1-204ENST00000475534 RPL28P46779 137 aaKnown RBP13.36□□□□□ -0.27
RRP1-204ENST00000475534 SND1-IT1Q9HBX3 110 aa13.36□□□□□ -0.27
RRP1-204ENST00000475534 IGLV1-50A0A075B6I6 118 aa13.35□□□□□ -0.27
RRP1-204ENST00000475534 H0Y8G0 127 aa13.35□□□□□ -0.27
RRP1-204ENST00000475534 TMEM223A0PJW6 202 aa13.34□□□□□ -0.27
RRP1-204ENST00000475534 RPL24P83731 157 aaKnown RBP13.34□□□□□ -0.27
RRP1-204ENST00000475534 LINC00158P58513 81 aa13.33□□□□□ -0.28
RRP1-204ENST00000475534 TNXBP22105 4242 aa13.33□□□□□ -0.28
RRP1-204ENST00000475534 SERF1AO75920 110 aa13.32□□□□□ -0.28
RRP1-204ENST00000475534 LEPROTL1O95214 131 aa13.32□□□□□ -0.28
RRP1-204ENST00000475534 KRTAP1-4P0C5Y4 121 aa13.32□□□□□ -0.28
RRP1-204ENST00000475534 IGKV2-28A0A075B6P5 120 aa13.31□□□□□ -0.28
RRP1-204ENST00000475534 SCO1O75880 301 aa13.31□□□□□ -0.28
RRP1-204ENST00000475534 IGKV2D-28P01615 120 aa13.31□□□□□ -0.28
RRP1-204ENST00000475534 ATP6V1G1O75348 118 aa13.3□□□□□ -0.28
RRP1-204ENST00000475534 RPL13AP40429 203 aaKnown RBP13.3□□□□□ -0.28
RRP1-204ENST00000475534 UBE2AP49459 152 aa13.3□□□□□ -0.28
RRP1-204ENST00000475534 A0A0U1RRA0 63 aa13.29□□□□□ -0.28
RRP1-204ENST00000475534 VPREB1P12018 145 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms