RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 SPAG11BQ08648 103 aa9.18□□□□□ -0.94
TRAF4-210ENST00000475329 KIAA0087Q14695 138 aa9.18□□□□□ -0.94
TRAF4-210ENST00000475329 Q6ZVH6 145 aa9.18□□□□□ -0.94
TRAF4-210ENST00000475329 TMEM238LA0A1B0GVL6 79 aa9.17□□□□□ -0.94
TRAF4-210ENST00000475329 A6NJY4 79 aa9.17□□□□□ -0.94
TRAF4-210ENST00000475329 ADAMTSL4-AS1Q5T5F5 129 aa9.16□□□□□ -0.94
TRAF4-210ENST00000475329 WWC2-AS2Q96NR7 200 aa9.16□□□□□ -0.94
TRAF4-210ENST00000475329 SMIM13P0DJ93 91 aa9.15□□□□□ -0.94
TRAF4-210ENST00000475329 TTC32Q5I0X7 151 aa9.15□□□□□ -0.94
TRAF4-210ENST00000475329 C2orf82Q6UX34 121 aa9.15□□□□□ -0.94
TRAF4-210ENST00000475329 IFITM1P13164 125 aa9.14□□□□□ -0.95
TRAF4-210ENST00000475329 RPL24P83731 157 aaKnown RBP9.14□□□□□ -0.95
TRAF4-210ENST00000475329 MUSTN1Q8IVN3 82 aa9.14□□□□□ -0.95
TRAF4-210ENST00000475329 C15orf56Q8N910 161 aa9.14□□□□□ -0.95
TRAF4-210ENST00000475329 COPS9Q8WXC6 57 aa9.14□□□□□ -0.95
TRAF4-210ENST00000475329 NHP2Q9NX24 153 aaKnown RBP9.14□□□□□ -0.95
TRAF4-210ENST00000475329 COX11Q9Y6N1 276 aa9.14□□□□□ -0.95
TRAF4-210ENST00000475329 DNAH7Q8WXX0 4024 aa9.14□□□□□ -0.95
TRAF4-210ENST00000475329 A0A0U1RRA0 63 aa9.13□□□□□ -0.95
TRAF4-210ENST00000475329 DAND5Q8N907 189 aa9.13□□□□□ -0.95
TRAF4-210ENST00000475329 KRTAP1-5Q9BYS1 174 aa9.13□□□□□ -0.95
TRAF4-210ENST00000475329 ERG28Q9UKR5 140 aa9.13□□□□□ -0.95
TRAF4-210ENST00000475329 ZNF561-AS1K7EIQ3 104 aa9.12□□□□□ -0.95
TRAF4-210ENST00000475329 LINC00158P58513 81 aa9.12□□□□□ -0.95
TRAF4-210ENST00000475329 HIGD2BQ4VC39 106 aa9.12□□□□□ -0.95
TRAF4-210ENST00000475329 NTN5Q8WTR8 489 aaPredicted RBP9.12□□□□□ -0.95
TRAF4-210ENST00000475329 GVQW2A0A096LPI5 108 aaPredicted RBP9.11□□□□□ -0.95
TRAF4-210ENST00000475329 A0A1B0GWB2 263 aa9.11□□□□□ -0.95
TRAF4-210ENST00000475329 NPC2P61916 151 aa9.11□□□□□ -0.95
TRAF4-210ENST00000475329 C6orf223Q8N319 242 aa9.11□□□□□ -0.95
TRAF4-210ENST00000475329 LINC00526Q96FQ7 95 aa9.11□□□□□ -0.95
TRAF4-210ENST00000475329 NBDYA0A0U1RRE5 68 aa9.1□□□□□ -0.95
TRAF4-210ENST00000475329 A4D1N5 150 aa9.1□□□□□ -0.95
TRAF4-210ENST00000475329 F8WDY8 70 aa9.1□□□□□ -0.95
TRAF4-210ENST00000475329 K7ERJ3 54 aa9.1□□□□□ -0.95
TRAF4-210ENST00000475329 TAX1BP3O14907 124 aa9.1□□□□□ -0.95
TRAF4-210ENST00000475329 PFN2P35080 140 aa9.1□□□□□ -0.95
TRAF4-210ENST00000475329 MIR7-3HGQ8N6C7 128 aa9.1□□□□□ -0.95
TRAF4-210ENST00000475329 LINC00308Q8TCZ7 52 aa9.1□□□□□ -0.95
TRAF4-210ENST00000475329 C2orf48Q96LS8 159 aa9.1□□□□□ -0.95
TRAF4-210ENST00000475329 PPDPFQ9H3Y8 114 aa9.1□□□□□ -0.95
TRAF4-210ENST00000475329 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.09□□□□□ -0.95
TRAF4-210ENST00000475329 COX17Q14061 63 aa9.09□□□□□ -0.95
TRAF4-210ENST00000475329 UNQ6190/PRO20217Q6UXQ8 127 aa9.09□□□□□ -0.95
TRAF4-210ENST00000475329 CAMK2N2Q96S95 79 aa9.09□□□□□ -0.95
TRAF4-210ENST00000475329 CSMD3Q7Z407 3707 aa9.08□□□□□ -0.96
TRAF4-210ENST00000475329 USP17L23D6RBM5 183 aa9.08□□□□□ -0.96
TRAF4-210ENST00000475329 CASC10Q5T4H9 136 aa9.08□□□□□ -0.96
TRAF4-210ENST00000475329 C10orf25Q5T742 122 aa9.08□□□□□ -0.96
TRAF4-210ENST00000475329 RAB37Q96AX2 223 aa9.08□□□□□ -0.96
TRAF4-210ENST00000475329 TRBV30A0A0K0K1B3 111 aa9.07□□□□□ -0.96
TRAF4-210ENST00000475329 A0A1B0GV90 55 aa9.07□□□□□ -0.96
TRAF4-210ENST00000475329 SOSTDC1Q6X4U4 206 aa9.07□□□□□ -0.96
TRAF4-210ENST00000475329 A0A0B4J2C4 111 aa9.06□□□□□ -0.96
TRAF4-210ENST00000475329 PSCAO43653 123 aa9.06□□□□□ -0.96
TRAF4-210ENST00000475329 EIF4EBP3O60516 100 aaPredicted RBP9.06□□□□□ -0.96
TRAF4-210ENST00000475329 CFC1BP0CG36 223 aa9.06□□□□□ -0.96
TRAF4-210ENST00000475329 CFC1P0CG37 223 aa9.06□□□□□ -0.96
TRAF4-210ENST00000475329 C9orf116Q5BN46 136 aaPredicted RBP9.06□□□□□ -0.96
TRAF4-210ENST00000475329 C6orf48Q9UBA6 75 aa9.06□□□□□ -0.96
TRAF4-210ENST00000475329 C9orf118A6NHY6 69 aa9.05□□□□□ -0.96
TRAF4-210ENST00000475329 C3orf84H3BNL1 204 aa9.05□□□□□ -0.96
TRAF4-210ENST00000475329 STARD9Q9P2P6 4700 aa9.05□□□□□ -0.96
TRAF4-210ENST00000475329 TENM2Q9NT68 2774 aa9.04□□□□□ -0.96
TRAF4-210ENST00000475329 SYCNQ0VAF6 134 aa9.04□□□□□ -0.96
TRAF4-210ENST00000475329 Q6ZRU5 148 aa9.04□□□□□ -0.96
TRAF4-210ENST00000475329 DNAH1Q9P2D7 4330 aa9.04□□□□□ -0.96
TRAF4-210ENST00000475329 PLECQ15149 4684 aaKnown RBP9.04□□□□□ -0.96
TRAF4-210ENST00000475329 PRO1854Q9UHT4 67 aa9.03□□□□□ -0.96
TRAF4-210ENST00000475329 H3BUT2 72 aa9.02□□□□□ -0.97
TRAF4-210ENST00000475329 LECT2O14960 151 aa9.02□□□□□ -0.97
TRAF4-210ENST00000475329 CARD19Q96LW7 228 aa9.02□□□□□ -0.97
TRAF4-210ENST00000475329 SND1-IT1Q9HBX3 110 aa9.02□□□□□ -0.97
TRAF4-210ENST00000475329 PGPEP1Q9NXJ5 209 aa9.02□□□□□ -0.97
TRAF4-210ENST00000475329 VPS13DQ5THJ4 4388 aa9.01□□□□□ -0.97
TRAF4-210ENST00000475329 LOC107984156A0A0G2JMH3 177 aa9.01□□□□□ -0.97
TRAF4-210ENST00000475329 RNF151Q2KHN1 245 aa9.01□□□□□ -0.97
TRAF4-210ENST00000475329 C14orf177Q52M58 125 aa9.01□□□□□ -0.97
TRAF4-210ENST00000475329 ARL17AQ8IVW1 177 aa9.01□□□□□ -0.97
TRAF4-210ENST00000475329 M0R2N4 97 aa9□□□□□ -0.97
TRAF4-210ENST00000475329 TSPAN13O95857 204 aa9□□□□□ -0.97
TRAF4-210ENST00000475329 LY6G6CO95867 125 aa9□□□□□ -0.97
TRAF4-210ENST00000475329 LINC00476Q8WZB0 136 aa9□□□□□ -0.97
TRAF4-210ENST00000475329 NAA38Q9BRA0 125 aaKnown RBP9□□□□□ -0.97
TRAF4-210ENST00000475329 NDUFC2-KCTD14E9PQ53 114 aa8.99□□□□□ -0.97
TRAF4-210ENST00000475329 WFDC2Q14508 124 aa8.99□□□□□ -0.97
TRAF4-210ENST00000475329 Q6ZR54 194 aa8.99□□□□□ -0.97
TRAF4-210ENST00000475329 Q6ZRN7 208 aaPredicted RBP8.99□□□□□ -0.97
TRAF4-210ENST00000475329 A0A1W2PPM0 123 aa8.98□□□□□ -0.97
TRAF4-210ENST00000475329 RPL13AP40429 203 aaKnown RBP8.98□□□□□ -0.97
TRAF4-210ENST00000475329 Q1RN00 199 aa8.98□□□□□ -0.97
TRAF4-210ENST00000475329 VAMP3Q15836 100 aa8.97□□□□□ -0.97
TRAF4-210ENST00000475329 LYSTQ99698 3801 aa8.97□□□□□ -0.97
TRAF4-210ENST00000475329 TRAV13-2A0A0B4J235 113 aa8.96□□□□□ -0.98
TRAF4-210ENST00000475329 H7C2G1 150 aa8.96□□□□□ -0.98
TRAF4-210ENST00000475329 NDUFC2O95298 119 aa8.96□□□□□ -0.98
TRAF4-210ENST00000475329 SLPIP03973 132 aa8.96□□□□□ -0.98
TRAF4-210ENST00000475329 FABP2P12104 132 aa8.96□□□□□ -0.98
TRAF4-210ENST00000475329 IGKV2-28A0A075B6P5 120 aa8.95□□□□□ -0.98
TRAF4-210ENST00000475329 IGKV2D-28P01615 120 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms