RNA–Protein interactions for RNA: ENST00000474413.5

EFNA1-204, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,083 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-204ENST00000474413 SMCO4Q9NRQ5 59 aa11.16□□□□□ -0.62
EFNA1-204ENST00000474413 TINCRA0A1B0GVN0 87 aa11.15□□□□□ -0.62
EFNA1-204ENST00000474413 PDZD11Q5EBL8 140 aa11.15□□□□□ -0.62
EFNA1-204ENST00000474413 Q8IZM0 81 aa11.15□□□□□ -0.62
EFNA1-204ENST00000474413 TRBV30A0A0K0K1B3 111 aa11.14□□□□□ -0.63
EFNA1-204ENST00000474413 LINC01549A6NIU2 74 aa11.14□□□□□ -0.63
EFNA1-204ENST00000474413 LINC00614P0C842 121 aa11.14□□□□□ -0.63
EFNA1-204ENST00000474413 GEMIN7Q9H840 131 aaKnown RBP11.14□□□□□ -0.63
EFNA1-204ENST00000474413 J3QL48 77 aa11.13□□□□□ -0.63
EFNA1-204ENST00000474413 SEC11AP67812 179 aa11.13□□□□□ -0.63
EFNA1-204ENST00000474413 KRTAP11-1Q8IUC1 163 aa11.13□□□□□ -0.63
EFNA1-204ENST00000474413 LINC00469Q8N7U9 141 aa11.13□□□□□ -0.63
EFNA1-204ENST00000474413 TOMM7Q9P0U1 55 aa11.13□□□□□ -0.63
EFNA1-204ENST00000474413 OXTP01178 125 aa11.12□□□□□ -0.63
EFNA1-204ENST00000474413 HBDP02042 147 aa11.12□□□□□ -0.63
EFNA1-204ENST00000474413 MT1HL1P0DM35 61 aa11.12□□□□□ -0.63
EFNA1-204ENST00000474413 PMVKQ15126 192 aa11.12□□□□□ -0.63
EFNA1-204ENST00000474413 C9orf129Q5T035 196 aaKnown RBP11.12□□□□□ -0.63
EFNA1-204ENST00000474413 PHF5AQ7RTV0 110 aaKnown RBP11.12□□□□□ -0.63
EFNA1-204ENST00000474413 NDUFC2-KCTD14E9PQ53 114 aa11.1□□□□□ -0.63
EFNA1-204ENST00000474413 IGLC3P0DOY3 106 aa11.1□□□□□ -0.63
EFNA1-204ENST00000474413 GAGE2EQ4V326 116 aa11.1□□□□□ -0.63
EFNA1-204ENST00000474413 GAGE2DQ9UEU5 116 aa11.1□□□□□ -0.63
EFNA1-204ENST00000474413 SPINK8P0C7L1 97 aa11.09□□□□□ -0.63
EFNA1-204ENST00000474413 PACRGQ96M98 296 aaPredicted RBP11.09□□□□□ -0.63
EFNA1-204ENST00000474413 PRSS2P07478 247 aa11.08□□□□□ -0.64
EFNA1-204ENST00000474413 FAM19A5Q7Z5A7 132 aaPredicted RBP11.08□□□□□ -0.64
EFNA1-204ENST00000474413 ZNF22P17026 224 aaPredicted RBP11.07□□□□□ -0.64
EFNA1-204ENST00000474413 LINC00310P59036 64 aa11.07□□□□□ -0.64
EFNA1-204ENST00000474413 CKS1BP61024 79 aa11.07□□□□□ -0.64
EFNA1-204ENST00000474413 SRSF9Q13242 221 aaKnown RBP eCLIP11.07□□□□□ -0.64
EFNA1-204ENST00000474413 C6orf226Q5I0X4 101 aa11.07□□□□□ -0.64
EFNA1-204ENST00000474413 PSORS1C2Q9UIG4 136 aa11.07□□□□□ -0.64
EFNA1-204ENST00000474413 IGLV5-39A0A0G2JS06 123 aa11.06□□□□□ -0.64
EFNA1-204ENST00000474413 F8VRH5 84 aa11.06□□□□□ -0.64
EFNA1-204ENST00000474413 COX7B2Q8TF08 81 aa11.06□□□□□ -0.64
EFNA1-204ENST00000474413 C11orf86A6NJI1 115 aa11.04□□□□□ -0.64
EFNA1-204ENST00000474413 TRGC2P03986 189 aa11.04□□□□□ -0.64
EFNA1-204ENST00000474413 RAB5BP61020 215 aa11.04□□□□□ -0.64
EFNA1-204ENST00000474413 SERTAD4-AS1Q5TG53 156 aa11.04□□□□□ -0.64
EFNA1-204ENST00000474413 CHCHD1Q96BP2 118 aaKnown RBP11.04□□□□□ -0.64
EFNA1-204ENST00000474413 COLCA2A8K830 154 aa11.03□□□□□ -0.64
EFNA1-204ENST00000474413 CXCL5P42830 114 aa11.03□□□□□ -0.64
EFNA1-204ENST00000474413 M0QXV9 152 aa11.02□□□□□ -0.65
EFNA1-204ENST00000474413 ATP5LO75964 103 aa11.02□□□□□ -0.65
EFNA1-204ENST00000474413 NDUFA6P56556 154 aa11.02□□□□□ -0.65
EFNA1-204ENST00000474413 XAGE1AQ9HD64 81 aa11.02□□□□□ -0.65
EFNA1-204ENST00000474413 BAGE3Q86Y29 109 aa11□□□□□ -0.65
EFNA1-204ENST00000474413 FAM19A2Q8N3H0 131 aa11□□□□□ -0.65
EFNA1-204ENST00000474413 H3BRM9 83 aa10.99□□□□□ -0.65
EFNA1-204ENST00000474413 SPINK6Q6UWN8 80 aa10.99□□□□□ -0.65
EFNA1-204ENST00000474413 NUPR1O60356 82 aa10.98□□□□□ -0.65
EFNA1-204ENST00000474413 SERF1AO75920 110 aa10.98□□□□□ -0.65
EFNA1-204ENST00000474413 IFI27L1Q96BM0 104 aa10.98□□□□□ -0.65
EFNA1-204ENST00000474413 SCO1O75880 301 aa10.97□□□□□ -0.65
EFNA1-204ENST00000474413 C1orf137Q5JT78 98 aa10.97□□□□□ -0.65
EFNA1-204ENST00000474413 LINC01600Q96MT4 127 aa10.97□□□□□ -0.65
EFNA1-204ENST00000474413 TRAV12-1A0A0B4J245 112 aa10.96□□□□□ -0.65
EFNA1-204ENST00000474413 CHTOPQ9Y3Y2 248 aaKnown RBP10.96□□□□□ -0.65
EFNA1-204ENST00000474413 ODF1Q14990 250 aa10.95□□□□□ -0.66
EFNA1-204ENST00000474413 HSBP1O75506 76 aa10.94□□□□□ -0.66
EFNA1-204ENST00000474413 IGLV7-43P04211 117 aa10.94□□□□□ -0.66
EFNA1-204ENST00000474413 ZNF625Q96I27 306 aaPredicted RBP10.94□□□□□ -0.66
EFNA1-204ENST00000474413 C22orf24Q9Y442 160 aa10.94□□□□□ -0.66
EFNA1-204ENST00000474413 TMEM170BQ5T4T1 132 aa10.93□□□□□ -0.66
EFNA1-204ENST00000474413 TMEM223A0PJW6 202 aa10.92□□□□□ -0.66
EFNA1-204ENST00000474413 UBR4Q5T4S7 5183 aa10.91□□□□□ -0.66
EFNA1-204ENST00000474413 KRTAP10-8P60410 259 aa10.91□□□□□ -0.66
EFNA1-204ENST00000474413 UBE2BP63146 152 aa10.91□□□□□ -0.66
EFNA1-204ENST00000474413 Q8NDZ9 215 aa10.91□□□□□ -0.66
EFNA1-204ENST00000474413 TP73-AS1Q9UF72 201 aa10.9□□□□□ -0.66
EFNA1-204ENST00000474413 PLA2G2DQ9UNK4 145 aa10.9□□□□□ -0.66
EFNA1-204ENST00000474413 IGLV5-37A0A075B6J1 123 aa10.89□□□□□ -0.67
EFNA1-204ENST00000474413 ERG28Q9UKR5 140 aa10.89□□□□□ -0.67
EFNA1-204ENST00000474413 PFN2P35080 140 aa10.88□□□□□ -0.67
EFNA1-204ENST00000474413 REG3GQ6UW15 175 aa10.88□□□□□ -0.67
EFNA1-204ENST00000474413 MRPL55Q7Z7F7 128 aaKnown RBP10.88□□□□□ -0.67
EFNA1-204ENST00000474413 SND1-IT1Q9HBX3 110 aa10.87□□□□□ -0.67
EFNA1-204ENST00000474413 H0Y8G0 127 aa10.86□□□□□ -0.67
EFNA1-204ENST00000474413 H0Y9J4 135 aa10.86□□□□□ -0.67
EFNA1-204ENST00000474413 LEPROTL1O95214 131 aa10.86□□□□□ -0.67
EFNA1-204ENST00000474413 KRTAP1-4P0C5Y4 121 aa10.86□□□□□ -0.67
EFNA1-204ENST00000474413 LINC00167Q96N53 147 aa10.86□□□□□ -0.67
EFNA1-204ENST00000474413 HIST1H2BKO60814 126 aa10.85□□□□□ -0.67
EFNA1-204ENST00000474413 HIST1H2BJP06899 126 aa10.85□□□□□ -0.67
EFNA1-204ENST00000474413 VPREB1P12018 145 aa10.85□□□□□ -0.67
EFNA1-204ENST00000474413 HIST1H2BOP23527 126 aa10.85□□□□□ -0.67
EFNA1-204ENST00000474413 HIST1H2BBP33778 126 aa10.85□□□□□ -0.67
EFNA1-204ENST00000474413 HIST1H2BDP58876 126 aa10.85□□□□□ -0.67
EFNA1-204ENST00000474413 TSPEAR-AS2P59090 65 aa10.85□□□□□ -0.67
EFNA1-204ENST00000474413 HIST1H2BCP62807 126 aa10.85□□□□□ -0.67
EFNA1-204ENST00000474413 HIST2H2BEQ16778 126 aa10.85□□□□□ -0.67
EFNA1-204ENST00000474413 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.85□□□□□ -0.67
EFNA1-204ENST00000474413 HIST1H2BHQ93079 126 aa10.85□□□□□ -0.67
EFNA1-204ENST00000474413 HIST1H2BNQ99877 126 aa10.85□□□□□ -0.67
EFNA1-204ENST00000474413 HIST1H2BMQ99879 126 aa10.85□□□□□ -0.67
EFNA1-204ENST00000474413 GAGE10A6NGK3 116 aa10.84□□□□□ -0.67
EFNA1-204ENST00000474413 RPL37AP8A6NKH3 93 aa10.83□□□□□ -0.68
EFNA1-204ENST00000474413 FABP4P15090 132 aa10.83□□□□□ -0.68
EFNA1-204ENST00000474413 LBHQ53QV2 105 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms