RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 RPL18AQ02543 176 aaKnown RBP9.46□□□□□ -0.9
CALD1-215ENST00000472096 C10orf25Q5T742 122 aa9.46□□□□□ -0.9
CALD1-215ENST00000472096 C18orf32Q8TCD1 76 aa9.46□□□□□ -0.9
CALD1-215ENST00000472096 C7orf33Q8WU49 177 aa9.46□□□□□ -0.9
CALD1-215ENST00000472096 YPEL4Q96NS1 127 aa9.46□□□□□ -0.9
CALD1-215ENST00000472096 HERVK_113P63121 156 aa9.45□□□□□ -0.9
CALD1-215ENST00000472096 SEC11AP67812 179 aa9.45□□□□□ -0.9
CALD1-215ENST00000472096 UNQ6190/PRO20217Q6UXQ8 127 aa9.45□□□□□ -0.9
CALD1-215ENST00000472096 KRTAP4-12Q9BQ66 201 aa9.45□□□□□ -0.9
CALD1-215ENST00000472096 C6orf48Q9UBA6 75 aa9.45□□□□□ -0.9
CALD1-215ENST00000472096 FAT3Q8TDW7 4589 aa9.44□□□□□ -0.9
CALD1-215ENST00000472096 URB1-AS1Q96HZ7 61 aa9.44□□□□□ -0.9
CALD1-215ENST00000472096 A0A096LNJ9 63 aa9.43□□□□□ -0.9
CALD1-215ENST00000472096 KRTAP29-1A8MX34 341 aaPredicted RBP9.43□□□□□ -0.9
CALD1-215ENST00000472096 GEMIN7Q9H840 131 aaKnown RBP9.43□□□□□ -0.9
CALD1-215ENST00000472096 CDKN2A-AS1Q9UH64 79 aa9.43□□□□□ -0.9
CALD1-215ENST00000472096 HERC1Q15751 4861 aa9.43□□□□□ -0.9
CALD1-215ENST00000472096 LRP1Q07954 4544 aaKnown RBP9.43□□□□□ -0.9
CALD1-215ENST00000472096 TLX1NBP0CAT3 122 aa9.42□□□□□ -0.9
CALD1-215ENST00000472096 C2orf82Q6UX34 121 aa9.42□□□□□ -0.9
CALD1-215ENST00000472096 KRTAP9-2Q9BYQ4 174 aa9.42□□□□□ -0.9
CALD1-215ENST00000472096 TRBV30A0A0K0K1B3 111 aa9.41□□□□□ -0.9
CALD1-215ENST00000472096 LINC00614P0C842 121 aa9.41□□□□□ -0.9
CALD1-215ENST00000472096 PRR3P79522 188 aaKnown RBP9.41□□□□□ -0.9
CALD1-215ENST00000472096 CBLN2Q8IUK8 224 aa9.41□□□□□ -0.9
CALD1-215ENST00000472096 Q8IZM0 81 aa9.41□□□□□ -0.9
CALD1-215ENST00000472096 PACRGQ96M98 296 aaPredicted RBP9.41□□□□□ -0.9
CALD1-215ENST00000472096 CST9LQ9H4G1 147 aa9.41□□□□□ -0.9
CALD1-215ENST00000472096 IGLV5-45A0A087WSX0 123 aa9.4□□□□□ -0.9
CALD1-215ENST00000472096 TINCRA0A1B0GVN0 87 aa9.4□□□□□ -0.9
CALD1-215ENST00000472096 A0A1W2PNN7 141 aa9.4□□□□□ -0.9
CALD1-215ENST00000472096 HBDP02042 147 aa9.4□□□□□ -0.9
CALD1-215ENST00000472096 PRSS2P07478 247 aa9.4□□□□□ -0.9
CALD1-215ENST00000472096 PMVKQ15126 192 aa9.4□□□□□ -0.9
CALD1-215ENST00000472096 C9orf116Q5BN46 136 aaPredicted RBP9.4□□□□□ -0.9
CALD1-215ENST00000472096 Q6ZRP5 223 aa9.4□□□□□ -0.9
CALD1-215ENST00000472096 SLC7A5P1Q8MH63 180 aa9.4□□□□□ -0.9
CALD1-215ENST00000472096 LINC00469Q8N7U9 141 aa9.4□□□□□ -0.9
CALD1-215ENST00000472096 TOMM7Q9P0U1 55 aa9.4□□□□□ -0.9
CALD1-215ENST00000472096 SMIM1B2RUZ4 78 aa9.38□□□□□ -0.91
CALD1-215ENST00000472096 OXTP01178 125 aa9.38□□□□□ -0.91
CALD1-215ENST00000472096 RAB5BP61020 215 aa9.38□□□□□ -0.91
CALD1-215ENST00000472096 PMCHL1Q16048 86 aa9.38□□□□□ -0.91
CALD1-215ENST00000472096 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.37□□□□□ -0.91
CALD1-215ENST00000472096 CKS1BP61024 79 aa9.37□□□□□ -0.91
CALD1-215ENST00000472096 KRTAP9-6A0A140TA67 174 aa9.36□□□□□ -0.91
CALD1-215ENST00000472096 NDUFC2-KCTD14E9PQ53 114 aa9.36□□□□□ -0.91
CALD1-215ENST00000472096 GAGE2EQ4V326 116 aa9.36□□□□□ -0.91
CALD1-215ENST00000472096 PDZD11Q5EBL8 140 aa9.36□□□□□ -0.91
CALD1-215ENST00000472096 C6orf226Q5I0X4 101 aa9.36□□□□□ -0.91
CALD1-215ENST00000472096 GAGE2DQ9UEU5 116 aa9.36□□□□□ -0.91
CALD1-215ENST00000472096 FAM168BA1KXE4 195 aa9.35□□□□□ -0.91
CALD1-215ENST00000472096 IGLC3P0DOY3 106 aa9.35□□□□□ -0.91
CALD1-215ENST00000472096 CXCL5P42830 114 aa9.35□□□□□ -0.91
CALD1-215ENST00000472096 F8VRH5 84 aa9.34□□□□□ -0.91
CALD1-215ENST00000472096 SPINK8P0C7L1 97 aa9.34□□□□□ -0.91
CALD1-215ENST00000472096 PHF5AQ7RTV0 110 aaKnown RBP9.34□□□□□ -0.91
CALD1-215ENST00000472096 ATP5LO75964 103 aa9.33□□□□□ -0.92
CALD1-215ENST00000472096 NDUFA6P56556 154 aa9.33□□□□□ -0.92
CALD1-215ENST00000472096 FAM19A5Q7Z5A7 132 aaPredicted RBP9.33□□□□□ -0.92
CALD1-215ENST00000472096 COX7B2Q8TF08 81 aa9.33□□□□□ -0.92
CALD1-215ENST00000472096 CHCHD1Q96BP2 118 aaKnown RBP9.33□□□□□ -0.92
CALD1-215ENST00000472096 H3BRM9 83 aa9.32□□□□□ -0.92
CALD1-215ENST00000472096 C9orf129Q5T035 196 aaKnown RBP9.32□□□□□ -0.92
CALD1-215ENST00000472096 KRTAP7-1Q8IUC3 87 aa9.32□□□□□ -0.92
CALD1-215ENST00000472096 ZNF22P17026 224 aaPredicted RBP9.31□□□□□ -0.92
CALD1-215ENST00000472096 TRGC2P03986 189 aa9.3□□□□□ -0.92
CALD1-215ENST00000472096 PSORS1C2Q9UIG4 136 aa9.3□□□□□ -0.92
CALD1-215ENST00000472096 IGLV5-39A0A0G2JS06 123 aa9.29□□□□□ -0.92
CALD1-215ENST00000472096 B5MCH6 92 aa9.29□□□□□ -0.92
CALD1-215ENST00000472096 M0QXV9 152 aa9.29□□□□□ -0.92
CALD1-215ENST00000472096 BAGE3Q86Y29 109 aa9.29□□□□□ -0.92
CALD1-215ENST00000472096 C11orf86A6NJI1 115 aa9.28□□□□□ -0.92
CALD1-215ENST00000472096 SPINK6Q6UWN8 80 aa9.28□□□□□ -0.92
CALD1-215ENST00000472096 HSBP1O75506 76 aa9.27□□□□□ -0.93
CALD1-215ENST00000472096 KRTAP11-1Q8IUC1 163 aa9.27□□□□□ -0.93
CALD1-215ENST00000472096 IFI27L1Q96BM0 104 aa9.27□□□□□ -0.93
CALD1-215ENST00000472096 XAGE1AQ9HD64 81 aa9.27□□□□□ -0.93
CALD1-215ENST00000472096 COLCA2A8K830 154 aa9.26□□□□□ -0.93
CALD1-215ENST00000472096 MT1HL1P0DM35 61 aa9.26□□□□□ -0.93
CALD1-215ENST00000472096 SRSF9Q13242 221 aaKnown RBP eCLIP9.26□□□□□ -0.938e-6■■□□□ 11.7
CALD1-215ENST00000472096 CHTOPQ9Y3Y2 248 aaKnown RBP9.26□□□□□ -0.93
CALD1-215ENST00000472096 TRAV12-1A0A0B4J245 112 aa9.25□□□□□ -0.93
CALD1-215ENST00000472096 C1orf137Q5JT78 98 aa9.25□□□□□ -0.93
CALD1-215ENST00000472096 SERTAD4-AS1Q5TG53 156 aa9.25□□□□□ -0.93
CALD1-215ENST00000472096 FAM19A2Q8N3H0 131 aa9.25□□□□□ -0.93
CALD1-215ENST00000472096 TNXBP22105 4242 aa9.24□□□□□ -0.93
CALD1-215ENST00000472096 TMEM170BQ5T4T1 132 aa9.24□□□□□ -0.93
CALD1-215ENST00000472096 SERF1AO75920 110 aa9.23□□□□□ -0.93
CALD1-215ENST00000472096 UBE2BP63146 152 aa9.23□□□□□ -0.93
CALD1-215ENST00000472096 IGLV7-43P04211 117 aa9.21□□□□□ -0.94
CALD1-215ENST00000472096 REG3GQ6UW15 175 aa9.21□□□□□ -0.94
CALD1-215ENST00000472096 LINC01600Q96MT4 127 aa9.21□□□□□ -0.94
CALD1-215ENST00000472096 C22orf24Q9Y442 160 aa9.21□□□□□ -0.94
CALD1-215ENST00000472096 SCO1O75880 301 aa9.2□□□□□ -0.94
CALD1-215ENST00000472096 TP73-AS1Q9UF72 201 aa9.2□□□□□ -0.94
CALD1-215ENST00000472096 TMEM223A0PJW6 202 aa9.19□□□□□ -0.94
CALD1-215ENST00000472096 LEPROTL1O95214 131 aa9.19□□□□□ -0.94
CALD1-215ENST00000472096 LCE3BQ5TA77 95 aa9.19□□□□□ -0.94
CALD1-215ENST00000472096 ERG28Q9UKR5 140 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms