RNA–Protein interactions for RNA: ENST00000470983.5

DNMT3A-209, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-209ENST00000470983 TINCRA0A1B0GVN0 87 aa9.46□□□□□ -0.9
DNMT3A-209ENST00000470983 PRSS2P07478 247 aa9.46□□□□□ -0.9
DNMT3A-209ENST00000470983 PDZD11Q5EBL8 140 aa9.46□□□□□ -0.9
DNMT3A-209ENST00000470983 LINC00474Q9P2X8 69 aa9.46□□□□□ -0.9
DNMT3A-209ENST00000470983 HNRNPA3P51991 378 aaKnown RBP9.45□□□□□ -0.9
DNMT3A-209ENST00000470983 IGLV5-45A0A087WSX0 123 aa9.44□□□□□ -0.9
DNMT3A-209ENST00000470983 A0A1W2PNN7 141 aa9.44□□□□□ -0.9
DNMT3A-209ENST00000470983 COLCA2A8K830 154 aa9.44□□□□□ -0.9
DNMT3A-209ENST00000470983 SMIM1B2RUZ4 78 aa9.44□□□□□ -0.9
DNMT3A-209ENST00000470983 SCO1O75880 301 aa9.44□□□□□ -0.9
DNMT3A-209ENST00000470983 C9orf116Q5BN46 136 aaPredicted RBP9.44□□□□□ -0.9
DNMT3A-209ENST00000470983 Q8IZM0 81 aa9.44□□□□□ -0.9
DNMT3A-209ENST00000470983 SPINK8P0C7L1 97 aa9.43□□□□□ -0.9
DNMT3A-209ENST00000470983 C6orf226Q5I0X4 101 aa9.43□□□□□ -0.9
DNMT3A-209ENST00000470983 Q6ZRP5 223 aa9.43□□□□□ -0.9
DNMT3A-209ENST00000470983 C7orf33Q8WU49 177 aa9.43□□□□□ -0.9
DNMT3A-209ENST00000470983 CHCHD1Q96BP2 118 aaKnown RBP9.43□□□□□ -0.9
DNMT3A-209ENST00000470983 TRBV30A0A0K0K1B3 111 aa9.42□□□□□ -0.9
DNMT3A-209ENST00000470983 ATP5LO75964 103 aa9.42□□□□□ -0.9
DNMT3A-209ENST00000470983 CKS1BP61024 79 aa9.42□□□□□ -0.9
DNMT3A-209ENST00000470983 GAGE2EQ4V326 116 aa9.42□□□□□ -0.9
DNMT3A-209ENST00000470983 BAGE3Q86Y29 109 aa9.42□□□□□ -0.9
DNMT3A-209ENST00000470983 GAGE2DQ9UEU5 116 aa9.42□□□□□ -0.9
DNMT3A-209ENST00000470983 TLX1NBP0CAT3 122 aa9.41□□□□□ -0.9
DNMT3A-209ENST00000470983 IGLC3P0DOY3 106 aa9.41□□□□□ -0.9
DNMT3A-209ENST00000470983 FAM168BA1KXE4 195 aa9.4□□□□□ -0.9
DNMT3A-209ENST00000470983 HSBP1O75506 76 aa9.4□□□□□ -0.9
DNMT3A-209ENST00000470983 LINC00310P59036 64 aa9.4□□□□□ -0.9
DNMT3A-209ENST00000470983 FAM19A2Q8N3H0 131 aa9.4□□□□□ -0.9
DNMT3A-209ENST00000470983 COX7B2Q8TF08 81 aa9.4□□□□□ -0.9
DNMT3A-209ENST00000470983 ZNF22P17026 224 aaPredicted RBP9.39□□□□□ -0.91
DNMT3A-209ENST00000470983 C11orf86A6NJI1 115 aa9.38□□□□□ -0.91
DNMT3A-209ENST00000470983 NDUFC2-KCTD14E9PQ53 114 aa9.38□□□□□ -0.91
DNMT3A-209ENST00000470983 F8VRH5 84 aa9.38□□□□□ -0.91
DNMT3A-209ENST00000470983 H3BRM9 83 aa9.38□□□□□ -0.91
DNMT3A-209ENST00000470983 SERF1AO75920 110 aa9.38□□□□□ -0.91
DNMT3A-209ENST00000470983 PRR3P79522 188 aaKnown RBP9.38□□□□□ -0.91
DNMT3A-209ENST00000470983 IFI27L1Q96BM0 104 aa9.38□□□□□ -0.91
DNMT3A-209ENST00000470983 PKHD1L1Q86WI1 4243 aa9.38□□□□□ -0.91
DNMT3A-209ENST00000470983 CXCL5P42830 114 aa9.37□□□□□ -0.91
DNMT3A-209ENST00000470983 PHF5AQ7RTV0 110 aaKnown RBP9.37□□□□□ -0.91
DNMT3A-209ENST00000470983 FAM19A5Q7Z5A7 132 aaPredicted RBP9.37□□□□□ -0.91
DNMT3A-209ENST00000470983 NUPR1O60356 82 aa9.36□□□□□ -0.91
DNMT3A-209ENST00000470983 C9orf129Q5T035 196 aaKnown RBP9.36□□□□□ -0.91
DNMT3A-209ENST00000470983 CHTOPQ9Y3Y2 248 aaKnown RBP9.36□□□□□ -0.91
DNMT3A-209ENST00000470983 TMEM170BQ5T4T1 132 aa9.35□□□□□ -0.91
DNMT3A-209ENST00000470983 KRTAP7-1Q8IUC3 87 aa9.35□□□□□ -0.91
DNMT3A-209ENST00000470983 IGLV5-39A0A0G2JS06 123 aa9.34□□□□□ -0.91
DNMT3A-209ENST00000470983 XAGE1AQ9HD64 81 aa9.34□□□□□ -0.91
DNMT3A-209ENST00000470983 H0Y8G0 127 aa9.33□□□□□ -0.92
DNMT3A-209ENST00000470983 TRAV12-1A0A0B4J245 112 aa9.32□□□□□ -0.92
DNMT3A-209ENST00000470983 M0QXV9 152 aa9.31□□□□□ -0.92
DNMT3A-209ENST00000470983 LEPROTL1O95214 131 aa9.31□□□□□ -0.92
DNMT3A-209ENST00000470983 KRTAP11-1Q8IUC1 163 aa9.31□□□□□ -0.92
DNMT3A-209ENST00000470983 LRP1Q07954 4544 aaKnown RBP9.3□□□□□ -0.92
DNMT3A-209ENST00000470983 FABP4P15090 132 aa9.3□□□□□ -0.92
DNMT3A-209ENST00000470983 PSORS1C2Q9UIG4 136 aa9.3□□□□□ -0.92
DNMT3A-209ENST00000470983 FAT3Q8TDW7 4589 aa9.3□□□□□ -0.92
DNMT3A-209ENST00000470983 HIST1H2BKO60814 126 aa9.29□□□□□ -0.92
DNMT3A-209ENST00000470983 HIST1H2BJP06899 126 aa9.29□□□□□ -0.92
DNMT3A-209ENST00000470983 HIST1H2BOP23527 126 aa9.29□□□□□ -0.92
DNMT3A-209ENST00000470983 HIST1H2BBP33778 126 aa9.29□□□□□ -0.92
DNMT3A-209ENST00000470983 HIST1H2BDP58876 126 aa9.29□□□□□ -0.92
DNMT3A-209ENST00000470983 HIST1H2BCP62807 126 aa9.29□□□□□ -0.92
DNMT3A-209ENST00000470983 ODF1Q14990 250 aa9.29□□□□□ -0.92
DNMT3A-209ENST00000470983 HIST2H2BEQ16778 126 aa9.29□□□□□ -0.92
DNMT3A-209ENST00000470983 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.29□□□□□ -0.92
DNMT3A-209ENST00000470983 HIST1H2BHQ93079 126 aa9.29□□□□□ -0.92
DNMT3A-209ENST00000470983 HIST1H2BNQ99877 126 aa9.29□□□□□ -0.92
DNMT3A-209ENST00000470983 HIST1H2BMQ99879 126 aa9.29□□□□□ -0.92
DNMT3A-209ENST00000470983 ZNF625Q96I27 306 aaPredicted RBP9.28□□□□□ -0.92
DNMT3A-209ENST00000470983 HMCN2Q8NDA2 5059 aa9.27□□□□□ -0.93
DNMT3A-209ENST00000470983 TMEM223A0PJW6 202 aa9.27□□□□□ -0.93
DNMT3A-209ENST00000470983 PFN2P35080 140 aa9.27□□□□□ -0.93
DNMT3A-209ENST00000470983 C1orf137Q5JT78 98 aa9.27□□□□□ -0.93
DNMT3A-209ENST00000470983 HSPB8Q9UJY1 196 aa9.27□□□□□ -0.93
DNMT3A-209ENST00000470983 UBE2BP63146 152 aa9.26□□□□□ -0.93
DNMT3A-209ENST00000470983 PMCHL2Q9BQD1 86 aa9.25□□□□□ -0.93
DNMT3A-209ENST00000470983 ERG28Q9UKR5 140 aa9.25□□□□□ -0.93
DNMT3A-209ENST00000470983 C22orf24Q9Y442 160 aa9.25□□□□□ -0.93
DNMT3A-209ENST00000470983 SRSF9Q13242 221 aaKnown RBP eCLIP9.23□□□□□ -0.93
DNMT3A-209ENST00000470983 SPINK6Q6UWN8 80 aa9.22□□□□□ -0.93
DNMT3A-209ENST00000470983 UBR4Q5T4S7 5183 aa9.22□□□□□ -0.93
DNMT3A-209ENST00000470983 MT1HL1P0DM35 61 aa9.21□□□□□ -0.94
DNMT3A-209ENST00000470983 A0A0U1RRA0 63 aa9.2□□□□□ -0.94
DNMT3A-209ENST00000470983 ATP6V1G1O75348 118 aa9.2□□□□□ -0.94
DNMT3A-209ENST00000470983 DPM2O94777 84 aa9.2□□□□□ -0.94
DNMT3A-209ENST00000470983 IGLV7-43P04211 117 aa9.2□□□□□ -0.94
DNMT3A-209ENST00000470983 PLNP26678 52 aa9.2□□□□□ -0.94
DNMT3A-209ENST00000470983 SFTA2Q6UW10 78 aa9.2□□□□□ -0.94
DNMT3A-209ENST00000470983 MRPL55Q7Z7F7 128 aaKnown RBP9.2□□□□□ -0.94
DNMT3A-209ENST00000470983 MAP1LC3CQ9BXW4 147 aa9.2□□□□□ -0.94
DNMT3A-209ENST00000470983 SND1-IT1Q9HBX3 110 aa9.2□□□□□ -0.94
DNMT3A-209ENST00000470983 GAGE10A6NGK3 116 aa9.19□□□□□ -0.94
DNMT3A-209ENST00000470983 TSPEAR-AS2P59090 65 aa9.19□□□□□ -0.94
DNMT3A-209ENST00000470983 LBHQ53QV2 105 aaPredicted RBP9.19□□□□□ -0.94
DNMT3A-209ENST00000470983 IGKCP01834 107 aa9.18□□□□□ -0.94
DNMT3A-209ENST00000470983 LINC00158P58513 81 aa9.18□□□□□ -0.94
DNMT3A-209ENST00000470983 COX17Q14061 63 aa9.18□□□□□ -0.94
DNMT3A-209ENST00000470983 LINC00167Q96N53 147 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms