RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 CAMK2N2Q96S95 79 aa12.25□□□□□ -0.45
USP11-205ENST00000467378 CHAC1Q9BUX1 264 aa12.25□□□□□ -0.45
USP11-205ENST00000467378 CHTOPQ9Y3Y2 248 aaKnown RBP12.25□□□□□ -0.45
USP11-205ENST00000467378 F8WDY8 70 aa12.24□□□□□ -0.45
USP11-205ENST00000467378 HSPB8Q9UJY1 196 aa12.24□□□□□ -0.45
USP11-205ENST00000467378 SMIM1B2RUZ4 78 aa12.23□□□□□ -0.45
USP11-205ENST00000467378 ZNF22P17026 224 aaPredicted RBP12.23□□□□□ -0.45
USP11-205ENST00000467378 PACRGQ96M98 296 aaPredicted RBP12.23□□□□□ -0.45
USP11-205ENST00000467378 C11orf86A6NJI1 115 aa12.22□□□□□ -0.45
USP11-205ENST00000467378 Q8IZM0 81 aa12.21□□□□□ -0.45
USP11-205ENST00000467378 MRPL35Q9NZE8 188 aaKnown RBP12.21□□□□□ -0.45
USP11-205ENST00000467378 LRP1Q07954 4544 aaKnown RBP12.21□□□□□ -0.45
USP11-205ENST00000467378 F8VRH5 84 aa12.2□□□□□ -0.46
USP11-205ENST00000467378 H3BRM9 83 aa12.2□□□□□ -0.46
USP11-205ENST00000467378 NDUFA1O15239 70 aa12.2□□□□□ -0.46
USP11-205ENST00000467378 SPINK8P0C7L1 97 aa12.2□□□□□ -0.46
USP11-205ENST00000467378 RNF151Q2KHN1 245 aa12.2□□□□□ -0.46
USP11-205ENST00000467378 C10orf25Q5T742 122 aa12.2□□□□□ -0.46
USP11-205ENST00000467378 UNQ6190/PRO20217Q6UXQ8 127 aa12.2□□□□□ -0.46
USP11-205ENST00000467378 TOMM7Q9P0U1 55 aa12.2□□□□□ -0.46
USP11-205ENST00000467378 PANO1I0J062 215 aa12.19□□□□□ -0.46
USP11-205ENST00000467378 OXTP01178 125 aa12.19□□□□□ -0.46
USP11-205ENST00000467378 ODF1Q14990 250 aa12.19□□□□□ -0.46
USP11-205ENST00000467378 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.19□□□□□ -0.46
USP11-205ENST00000467378 H0Y8G0 127 aa12.18□□□□□ -0.46
USP11-205ENST00000467378 PRSS2P07478 247 aa12.18□□□□□ -0.46
USP11-205ENST00000467378 C6orf226Q5I0X4 101 aa12.18□□□□□ -0.46
USP11-205ENST00000467378 C2orf82Q6UX34 121 aa12.18□□□□□ -0.46
USP11-205ENST00000467378 CIRBPQ14011 172 aaKnown RBP12.17□□□□□ -0.46
USP11-205ENST00000467378 TMEM170BQ5T4T1 132 aa12.17□□□□□ -0.46
USP11-205ENST00000467378 C6orf48Q9UBA6 75 aa12.17□□□□□ -0.46
USP11-205ENST00000467378 IGLV5-39A0A0G2JS06 123 aa12.16□□□□□ -0.46
USP11-205ENST00000467378 COX7B2Q8TF08 81 aa12.16□□□□□ -0.46
USP11-205ENST00000467378 MAP1LC3CQ9BXW4 147 aa12.16□□□□□ -0.46
USP11-205ENST00000467378 CHTF8P0CG12 524 aa12.15□□□□□ -0.46
USP11-205ENST00000467378 SCXQ7RTU7 201 aa12.15□□□□□ -0.46
USP11-205ENST00000467378 A0A096LNI7 61 aa12.14□□□□□ -0.47
USP11-205ENST00000467378 TRBV30A0A0K0K1B3 111 aa12.14□□□□□ -0.47
USP11-205ENST00000467378 LOC107984640A0A0U1RRK4 108 aa12.14□□□□□ -0.47
USP11-205ENST00000467378 CKS1BP61024 79 aa12.14□□□□□ -0.47
USP11-205ENST00000467378 CIRBP-AS1Q8TBR5 109 aa12.14□□□□□ -0.47
USP11-205ENST00000467378 PKIGQ9Y2B9 76 aa12.14□□□□□ -0.47
USP11-205ENST00000467378 TMEM223A0PJW6 202 aa12.13□□□□□ -0.47
USP11-205ENST00000467378 SPACA4Q8TDM5 124 aa12.13□□□□□ -0.47
USP11-205ENST00000467378 SYS1-DBNDD2H3BUS1 97 aa12.12□□□□□ -0.47
USP11-205ENST00000467378 TLX1NBP0CAT3 122 aa12.12□□□□□ -0.47
USP11-205ENST00000467378 CXCL5P42830 114 aa12.12□□□□□ -0.47
USP11-205ENST00000467378 FAT3Q8TDW7 4589 aa12.12□□□□□ -0.47
USP11-205ENST00000467378 IGKV2-24A0A0C4DH68 120 aa12.11□□□□□ -0.47
USP11-205ENST00000467378 PMCHL2Q9BQD1 86 aa12.11□□□□□ -0.47
USP11-205ENST00000467378 PTTG1IPP53801 180 aa12.1□□□□□ -0.47
USP11-205ENST00000467378 GAGE2BQ13066 116 aa12.1□□□□□ -0.47
USP11-205ENST00000467378 C9orf116Q5BN46 136 aaPredicted RBP12.1□□□□□ -0.47
USP11-205ENST00000467378 DPM2O94777 84 aa12.09□□□□□ -0.47
USP11-205ENST00000467378 C3orf79P0CE67 100 aa12.09□□□□□ -0.47
USP11-205ENST00000467378 PLNP26678 52 aa12.09□□□□□ -0.47
USP11-205ENST00000467378 MAJINQ3KP22 176 aa12.09□□□□□ -0.47
USP11-205ENST00000467378 DPH3Q96FX2 82 aa12.09□□□□□ -0.47
USP11-205ENST00000467378 A0A087WYN8 130 aa12.08□□□□□ -0.48
USP11-205ENST00000467378 IGKCP01834 107 aa12.08□□□□□ -0.48
USP11-205ENST00000467378 RPL18AQ02543 176 aaKnown RBP12.08□□□□□ -0.48
USP11-205ENST00000467378 PET117Q6UWS5 81 aa12.08□□□□□ -0.48
USP11-205ENST00000467378 Q6ZRP5 223 aa12.08□□□□□ -0.48
USP11-205ENST00000467378 HIST3H2BBQ8N257 126 aa12.08□□□□□ -0.48
USP11-205ENST00000467378 LINC00474Q9P2X8 69 aa12.08□□□□□ -0.48
USP11-205ENST00000467378 S100A6P06703 90 aa12.07□□□□□ -0.48
USP11-205ENST00000467378 LINC01545Q5VT33 79 aa12.07□□□□□ -0.48
USP11-205ENST00000467378 NDUFC2-KCTD14E9PQ53 114 aa12.06□□□□□ -0.48
USP11-205ENST00000467378 KRTAP10-4P60372 401 aaPredicted RBP12.06□□□□□ -0.48
USP11-205ENST00000467378 PLAC8Q9NZF1 115 aa12.06□□□□□ -0.48
USP11-205ENST00000467378 STPG4Q8N801 248 aa12.05□□□□□ -0.48
USP11-205ENST00000467378 KRTDAPP60985 99 aa12.04□□□□□ -0.48
USP11-205ENST00000467378 SNRPEP62304 92 aaKnown RBP12.03□□□□□ -0.48
USP11-205ENST00000467378 GAGE2EQ4V326 116 aa12.03□□□□□ -0.48
USP11-205ENST00000467378 ZNF625Q96I27 306 aaPredicted RBP12.03□□□□□ -0.48
USP11-205ENST00000467378 HIST1H2BLQ99880 126 aa12.03□□□□□ -0.48
USP11-205ENST00000467378 GAGE2DQ9UEU5 116 aa12.03□□□□□ -0.48
USP11-205ENST00000467378 A0A1W2PNN7 141 aa12.01□□□□□ -0.49
USP11-205ENST00000467378 C5orf52A6NGY3 159 aa12.01□□□□□ -0.49
USP11-205ENST00000467378 S100A2P29034 98 aa12.01□□□□□ -0.49
USP11-205ENST00000467378 RNF213Q63HN8 5207 aa12.01□□□□□ -0.49
USP11-205ENST00000467378 LEPROTO15243 131 aa12□□□□□ -0.49
USP11-205ENST00000467378 SFTA2Q6UW10 78 aa12□□□□□ -0.49
USP11-205ENST00000467378 HERVK_113P61574 105 aa11.99□□□□□ -0.49
USP11-205ENST00000467378 C9orf129Q5T035 196 aaKnown RBP11.99□□□□□ -0.49
USP11-205ENST00000467378 TSPEAR-AS2P59090 65 aa11.98□□□□□ -0.49
USP11-205ENST00000467378 PLEKHB2Q96CS7 222 aa11.98□□□□□ -0.49
USP11-205ENST00000467378 ERG28Q9UKR5 140 aa11.97□□□□□ -0.49
USP11-205ENST00000467378 FAM168BA1KXE4 195 aa11.96□□□□□ -0.49
USP11-205ENST00000467378 PFN2P35080 140 aa11.96□□□□□ -0.49
USP11-205ENST00000467378 PKHD1L1Q86WI1 4243 aa11.95□□□□□ -0.5
USP11-205ENST00000467378 C20orf202A1L168 122 aa11.95□□□□□ -0.5
USP11-205ENST00000467378 E9PLD3 99 aa11.95□□□□□ -0.5
USP11-205ENST00000467378 J3QQQ9 107 aa11.95□□□□□ -0.5
USP11-205ENST00000467378 COX17Q14061 63 aa11.95□□□□□ -0.5
USP11-205ENST00000467378 KRTAP7-1Q8IUC3 87 aa11.95□□□□□ -0.5
USP11-205ENST00000467378 XAGE1AQ9HD64 81 aa11.95□□□□□ -0.5
USP11-205ENST00000467378 NDUFA12Q9UI09 145 aa11.95□□□□□ -0.5
USP11-205ENST00000467378 MYMXA0A1B0GTQ4 84 aa11.93□□□□□ -0.5
USP11-205ENST00000467378 HERV-K104P63124 156 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms