RNA–Protein interactions for RNA: ENST00000464783.1

RPUSD3-211, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,149 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-211ENST00000464783 STPG4Q8N801 248 aa7.66□□□□□ -1.18
RPUSD3-211ENST00000464783 TRBV30A0A0K0K1B3 111 aa7.65□□□□□ -1.18
RPUSD3-211ENST00000464783 SMIM1B2RUZ4 78 aa7.65□□□□□ -1.18
RPUSD3-211ENST00000464783 LEPROTL1O95214 131 aa7.65□□□□□ -1.18
RPUSD3-211ENST00000464783 PLA2G1BP04054 148 aaKnown RBP7.65□□□□□ -1.18
RPUSD3-211ENST00000464783 PTTG1IPP53801 180 aa7.65□□□□□ -1.18
RPUSD3-211ENST00000464783 C6orf48Q9UBA6 75 aa7.65□□□□□ -1.18
RPUSD3-211ENST00000464783 CHTOPQ9Y3Y2 248 aaKnown RBP7.65□□□□□ -1.18
RPUSD3-211ENST00000464783 H0Y8G0 127 aa7.64□□□□□ -1.19
RPUSD3-211ENST00000464783 LINC00310P59036 64 aa7.64□□□□□ -1.19
RPUSD3-211ENST00000464783 COX7B2Q8TF08 81 aa7.64□□□□□ -1.19
RPUSD3-211ENST00000464783 TRAV12-1A0A0B4J245 112 aa7.63□□□□□ -1.19
RPUSD3-211ENST00000464783 HIST1H2BKO60814 126 aa7.63□□□□□ -1.19
RPUSD3-211ENST00000464783 HIST1H2BJP06899 126 aa7.63□□□□□ -1.19
RPUSD3-211ENST00000464783 ZNF22P17026 224 aaPredicted RBP7.63□□□□□ -1.19
RPUSD3-211ENST00000464783 HIST1H2BOP23527 126 aa7.63□□□□□ -1.19
RPUSD3-211ENST00000464783 HIST1H2BBP33778 126 aa7.63□□□□□ -1.19
RPUSD3-211ENST00000464783 CXCL5P42830 114 aa7.63□□□□□ -1.19
RPUSD3-211ENST00000464783 HIST1H2BDP58876 126 aa7.63□□□□□ -1.19
RPUSD3-211ENST00000464783 HIST1H2BCP62807 126 aa7.63□□□□□ -1.19
RPUSD3-211ENST00000464783 HIST2H2BEQ16778 126 aa7.63□□□□□ -1.19
RPUSD3-211ENST00000464783 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.63□□□□□ -1.19
RPUSD3-211ENST00000464783 TMEM170BQ5T4T1 132 aa7.63□□□□□ -1.19
RPUSD3-211ENST00000464783 HIST1H2BHQ93079 126 aa7.63□□□□□ -1.19
RPUSD3-211ENST00000464783 HIST1H2BNQ99877 126 aa7.63□□□□□ -1.19
RPUSD3-211ENST00000464783 HIST1H2BMQ99879 126 aa7.63□□□□□ -1.19
RPUSD3-211ENST00000464783 PLAC8Q9NZF1 115 aa7.63□□□□□ -1.19
RPUSD3-211ENST00000464783 HSPB8Q9UJY1 196 aa7.63□□□□□ -1.19
RPUSD3-211ENST00000464783 C11orf86A6NJI1 115 aa7.62□□□□□ -1.19
RPUSD3-211ENST00000464783 F8VRH5 84 aa7.62□□□□□ -1.19
RPUSD3-211ENST00000464783 NUPR1O60356 82 aa7.62□□□□□ -1.19
RPUSD3-211ENST00000464783 FABP4P15090 132 aa7.62□□□□□ -1.19
RPUSD3-211ENST00000464783 INAFM2P0DMQ5 153 aa7.61□□□□□ -1.19
RPUSD3-211ENST00000464783 RPL37AP61513 92 aaKnown RBP7.61□□□□□ -1.19
RPUSD3-211ENST00000464783 GAGE2EQ4V326 116 aa7.61□□□□□ -1.19
RPUSD3-211ENST00000464783 C9orf116Q5BN46 136 aaPredicted RBP7.61□□□□□ -1.19
RPUSD3-211ENST00000464783 C7orf33Q8WU49 177 aa7.61□□□□□ -1.19
RPUSD3-211ENST00000464783 GAGE2DQ9UEU5 116 aa7.61□□□□□ -1.19
RPUSD3-211ENST00000464783 NDUFC2-KCTD14E9PQ53 114 aa7.6□□□□□ -1.19
RPUSD3-211ENST00000464783 TLX1NBP0CAT3 122 aa7.6□□□□□ -1.19
RPUSD3-211ENST00000464783 Q6ZRP5 223 aa7.6□□□□□ -1.19
RPUSD3-211ENST00000464783 PCLOQ9Y6V0 5065 aa7.59□□□□□ -1.19
RPUSD3-211ENST00000464783 ABCA13Q86UQ4 5058 aa7.59□□□□□ -1.19
RPUSD3-211ENST00000464783 FAT1Q14517 4588 aa7.58□□□□□ -1.2
RPUSD3-211ENST00000464783 VPS13BQ7Z7G8 4022 aa7.58□□□□□ -1.2
RPUSD3-211ENST00000464783 IGLV5-39A0A0G2JS06 123 aa7.58□□□□□ -1.2
RPUSD3-211ENST00000464783 MAP1LC3CQ9BXW4 147 aa7.58□□□□□ -1.2
RPUSD3-211ENST00000464783 SRRM2Q9UQ35 2752 aaKnown RBP7.57□□□□□ -1.2
RPUSD3-211ENST00000464783 ODF1Q14990 250 aa7.57□□□□□ -1.2
RPUSD3-211ENST00000464783 A0A1W2PNN7 141 aa7.56□□□□□ -1.2
RPUSD3-211ENST00000464783 FAM19A5Q7Z5A7 132 aaPredicted RBP7.56□□□□□ -1.2
RPUSD3-211ENST00000464783 TMEM223A0PJW6 202 aa7.55□□□□□ -1.2
RPUSD3-211ENST00000464783 FAM168BA1KXE4 195 aa7.55□□□□□ -1.2
RPUSD3-211ENST00000464783 PLNP26678 52 aa7.55□□□□□ -1.2
RPUSD3-211ENST00000464783 DPM2O94777 84 aa7.54□□□□□ -1.2
RPUSD3-211ENST00000464783 SFTA2Q6UW10 78 aa7.54□□□□□ -1.2
RPUSD3-211ENST00000464783 PMCHL2Q9BQD1 86 aa7.54□□□□□ -1.2
RPUSD3-211ENST00000464783 XAGE1AQ9HD64 81 aa7.54□□□□□ -1.2
RPUSD3-211ENST00000464783 PFN2P35080 140 aa7.53□□□□□ -1.2
RPUSD3-211ENST00000464783 KRTAP10-4P60372 401 aaPredicted RBP7.53□□□□□ -1.2
RPUSD3-211ENST00000464783 C9orf129Q5T035 196 aaKnown RBP7.53□□□□□ -1.2
RPUSD3-211ENST00000464783 PHF5AQ7RTV0 110 aaKnown RBP7.53□□□□□ -1.2
RPUSD3-211ENST00000464783 ZNF625Q96I27 306 aaPredicted RBP7.53□□□□□ -1.2
RPUSD3-211ENST00000464783 M0QXV9 152 aa7.52□□□□□ -1.21
RPUSD3-211ENST00000464783 IGKCP01834 107 aa7.52□□□□□ -1.21
RPUSD3-211ENST00000464783 HERVK_113P61574 105 aa7.52□□□□□ -1.21
RPUSD3-211ENST00000464783 COA6Q5JTJ3 125 aaKnown RBP7.52□□□□□ -1.21
RPUSD3-211ENST00000464783 ERG28Q9UKR5 140 aa7.52□□□□□ -1.21
RPUSD3-211ENST00000464783 SYS1-DBNDD2H3BUS1 97 aa7.51□□□□□ -1.21
RPUSD3-211ENST00000464783 PRR3P79522 188 aaKnown RBP7.51□□□□□ -1.21
RPUSD3-211ENST00000464783 UBE2BP63146 152 aa7.5□□□□□ -1.21
RPUSD3-211ENST00000464783 KRTDAPP60985 99 aa7.49□□□□□ -1.21
RPUSD3-211ENST00000464783 COX17Q14061 63 aa7.49□□□□□ -1.21
RPUSD3-211ENST00000464783 LEPROTO15243 131 aa7.48□□□□□ -1.21
RPUSD3-211ENST00000464783 LINC00158P58513 81 aa7.48□□□□□ -1.21
RPUSD3-211ENST00000464783 MEIG1Q5JSS6 88 aa7.48□□□□□ -1.21
RPUSD3-211ENST00000464783 SERTAD4-AS1Q5TG53 156 aa7.48□□□□□ -1.21
RPUSD3-211ENST00000464783 PET117Q6UWS5 81 aa7.48□□□□□ -1.21
RPUSD3-211ENST00000464783 PLEKHB2Q96CS7 222 aa7.48□□□□□ -1.21
RPUSD3-211ENST00000464783 NDUFA12Q9UI09 145 aa7.48□□□□□ -1.21
RPUSD3-211ENST00000464783 A0A0U1RRA0 63 aa7.47□□□□□ -1.21
RPUSD3-211ENST00000464783 MYMXA0A1B0GTQ4 84 aa7.47□□□□□ -1.21
RPUSD3-211ENST00000464783 S100A6P06703 90 aa7.47□□□□□ -1.21
RPUSD3-211ENST00000464783 C3orf79P0CE67 100 aa7.47□□□□□ -1.21
RPUSD3-211ENST00000464783 HNRNPA3P51991 378 aaKnown RBP7.47□□□□□ -1.21
RPUSD3-211ENST00000464783 HERV-K104P63124 156 aa7.47□□□□□ -1.21
RPUSD3-211ENST00000464783 KRTAP7-1Q8IUC3 87 aa7.47□□□□□ -1.21
RPUSD3-211ENST00000464783 PSORS1C2Q9UIG4 136 aa7.47□□□□□ -1.21
RPUSD3-211ENST00000464783 C22orf24Q9Y442 160 aa7.47□□□□□ -1.21
RPUSD3-211ENST00000464783 FLG2Q5D862 2391 aaPredicted RBP7.47□□□□□ -1.21
RPUSD3-211ENST00000464783 J3QQQ9 107 aa7.46□□□□□ -1.22
RPUSD3-211ENST00000464783 LGALS3P17931 250 aaKnown RBP7.46□□□□□ -1.22
RPUSD3-211ENST00000464783 S100A2P29034 98 aa7.46□□□□□ -1.22
RPUSD3-211ENST00000464783 LBHQ53QV2 105 aaPredicted RBP7.46□□□□□ -1.22
RPUSD3-211ENST00000464783 C1orf137Q5JT78 98 aa7.46□□□□□ -1.22
RPUSD3-211ENST00000464783 LINC01545Q5VT33 79 aa7.46□□□□□ -1.22
RPUSD3-211ENST00000464783 SND1-IT1Q9HBX3 110 aa7.46□□□□□ -1.22
RPUSD3-211ENST00000464783 C20orf202A1L168 122 aa7.45□□□□□ -1.22
RPUSD3-211ENST00000464783 SMIM13P0DJ93 91 aa7.45□□□□□ -1.22
RPUSD3-211ENST00000464783 TSPEAR-AS2P59090 65 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 148 ms