RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 DNAH8Q96JB1 4490 aa12.98□□□□□ -0.33
NUP43-205ENST00000463048 COX7B2Q8TF08 81 aa12.98□□□□□ -0.33
NUP43-205ENST00000463048 Q6ZSA8 131 aa12.97□□□□□ -0.33
NUP43-205ENST00000463048 Q8IZM0 81 aa12.97□□□□□ -0.33
NUP43-205ENST00000463048 C6orf48Q9UBA6 75 aa12.97□□□□□ -0.33
NUP43-205ENST00000463048 A0A096LNI7 61 aa12.96□□□□□ -0.33
NUP43-205ENST00000463048 SMR3BP02814 79 aaPredicted RBP12.96□□□□□ -0.33
NUP43-205ENST00000463048 RPL18AQ02543 176 aaKnown RBP12.96□□□□□ -0.33
NUP43-205ENST00000463048 GAGE2BQ13066 116 aa12.96□□□□□ -0.33
NUP43-205ENST00000463048 SCXQ7RTU7 201 aa12.96□□□□□ -0.33
NUP43-205ENST00000463048 C9orf116Q5BN46 136 aaPredicted RBP12.95□□□□□ -0.34
NUP43-205ENST00000463048 LOC107984640A0A0U1RRK4 108 aa12.94□□□□□ -0.34
NUP43-205ENST00000463048 F8WDY8 70 aa12.94□□□□□ -0.34
NUP43-205ENST00000463048 MAJINQ3KP22 176 aa12.94□□□□□ -0.34
NUP43-205ENST00000463048 S100A6P06703 90 aa12.93□□□□□ -0.34
NUP43-205ENST00000463048 CIRBP-AS1Q8TBR5 109 aa12.93□□□□□ -0.34
NUP43-205ENST00000463048 SYS1-DBNDD2H3BUS1 97 aa12.92□□□□□ -0.34
NUP43-205ENST00000463048 DPM2O94777 84 aa12.92□□□□□ -0.34
NUP43-205ENST00000463048 KRTDAPP60985 99 aa12.92□□□□□ -0.34
NUP43-205ENST00000463048 IGLV5-39A0A0G2JS06 123 aa12.91□□□□□ -0.34
NUP43-205ENST00000463048 TMEM223A0PJW6 202 aa12.91□□□□□ -0.34
NUP43-205ENST00000463048 RNF151Q2KHN1 245 aa12.91□□□□□ -0.34
NUP43-205ENST00000463048 HSPG2P98160 4391 aa12.91□□□□□ -0.34
NUP43-205ENST00000463048 RYR1P21817 5038 aa12.91□□□□□ -0.34
NUP43-205ENST00000463048 TRBV30A0A0K0K1B3 111 aa12.9□□□□□ -0.34
NUP43-205ENST00000463048 C3orf79P0CE67 100 aa12.9□□□□□ -0.34
NUP43-205ENST00000463048 SPACA4Q8TDM5 124 aa12.9□□□□□ -0.34
NUP43-205ENST00000463048 KRTAP17-1Q9BYP8 105 aa12.9□□□□□ -0.34
NUP43-205ENST00000463048 IGKCP01834 107 aa12.89□□□□□ -0.35
NUP43-205ENST00000463048 PLNP26678 52 aa12.89□□□□□ -0.35
NUP43-205ENST00000463048 S100A2P29034 98 aa12.89□□□□□ -0.35
NUP43-205ENST00000463048 PTTG1IPP53801 180 aa12.89□□□□□ -0.35
NUP43-205ENST00000463048 GAGE2EQ4V326 116 aa12.89□□□□□ -0.35
NUP43-205ENST00000463048 HIST3H2BBQ8N257 126 aa12.89□□□□□ -0.35
NUP43-205ENST00000463048 GAGE2DQ9UEU5 116 aa12.89□□□□□ -0.35
NUP43-205ENST00000463048 PKIGQ9Y2B9 76 aa12.89□□□□□ -0.35
NUP43-205ENST00000463048 A0A087WYN8 130 aa12.88□□□□□ -0.35
NUP43-205ENST00000463048 CXCL5P42830 114 aa12.88□□□□□ -0.35
NUP43-205ENST00000463048 SNRPEP62304 92 aaKnown RBP12.87□□□□□ -0.35
NUP43-205ENST00000463048 Q6ZRP5 223 aa12.87□□□□□ -0.35
NUP43-205ENST00000463048 STPG4Q8N801 248 aa12.87□□□□□ -0.35
NUP43-205ENST00000463048 CIRBPQ14011 172 aaKnown RBP12.86□□□□□ -0.35
NUP43-205ENST00000463048 PET117Q6UWS5 81 aa12.86□□□□□ -0.35
NUP43-205ENST00000463048 ZNF625Q96I27 306 aaPredicted RBP12.86□□□□□ -0.35
NUP43-205ENST00000463048 LINC01545Q5VT33 79 aa12.84□□□□□ -0.35
NUP43-205ENST00000463048 HIST1H2BLQ99880 126 aa12.84□□□□□ -0.35
NUP43-205ENST00000463048 NDUFC2-KCTD14E9PQ53 114 aa12.83□□□□□ -0.36
NUP43-205ENST00000463048 LINC00474Q9P2X8 69 aa12.83□□□□□ -0.36
NUP43-205ENST00000463048 HERC2O95714 4834 aa12.83□□□□□ -0.36
NUP43-205ENST00000463048 TLX1NBP0CAT3 122 aa12.82□□□□□ -0.36
NUP43-205ENST00000463048 LINC00528Q8N1L1 170 aa12.82□□□□□ -0.36
NUP43-205ENST00000463048 Q8N1X5 172 aa12.82□□□□□ -0.36
NUP43-205ENST00000463048 PFN2P35080 140 aa12.81□□□□□ -0.36
NUP43-205ENST00000463048 HERVK_113P61574 105 aa12.81□□□□□ -0.36
NUP43-205ENST00000463048 A0A1W2PNN7 141 aa12.8□□□□□ -0.36
NUP43-205ENST00000463048 FAM168BA1KXE4 195 aa12.8□□□□□ -0.36
NUP43-205ENST00000463048 TSPEAR-AS2P59090 65 aa12.8□□□□□ -0.36
NUP43-205ENST00000463048 XAGE1AQ9HD64 81 aa12.8□□□□□ -0.36
NUP43-205ENST00000463048 PLAC8Q9NZF1 115 aa12.8□□□□□ -0.36
NUP43-205ENST00000463048 LEPROTO15243 131 aa12.79□□□□□ -0.36
NUP43-205ENST00000463048 Q5VSD8 79 aa12.79□□□□□ -0.36
NUP43-205ENST00000463048 ATOH7Q8N100 152 aa12.79□□□□□ -0.36
NUP43-205ENST00000463048 C20orf202A1L168 122 aa12.78□□□□□ -0.36
NUP43-205ENST00000463048 C5orf52A6NGY3 159 aa12.78□□□□□ -0.36
NUP43-205ENST00000463048 KRTAP4-5Q9BYR2 181 aa12.78□□□□□ -0.36
NUP43-205ENST00000463048 TMA7Q9Y2S6 64 aaKnown RBP12.78□□□□□ -0.36
NUP43-205ENST00000463048 A0A0U1RRA0 63 aa12.77□□□□□ -0.37
NUP43-205ENST00000463048 EPM2AB3EWF7 344 aa12.77□□□□□ -0.37
NUP43-205ENST00000463048 FAM229AH3BQW9 127 aa12.77□□□□□ -0.37
NUP43-205ENST00000463048 C9orf129Q5T035 196 aaKnown RBP12.77□□□□□ -0.37
NUP43-205ENST00000463048 FAM19A5Q7Z5A7 132 aaPredicted RBP12.77□□□□□ -0.37
NUP43-205ENST00000463048 PLEKHB2Q96CS7 222 aa12.77□□□□□ -0.37
NUP43-205ENST00000463048 NDUFA12Q9UI09 145 aa12.77□□□□□ -0.37
NUP43-205ENST00000463048 ERG28Q9UKR5 140 aa12.77□□□□□ -0.37
NUP43-205ENST00000463048 J3QQQ9 107 aa12.76□□□□□ -0.37
NUP43-205ENST00000463048 LGALS3P17931 250 aaKnown RBP12.75□□□□□ -0.37
NUP43-205ENST00000463048 FAT1Q14517 4588 aa12.73□□□□□ -0.37
NUP43-205ENST00000463048 LINC00158P58513 81 aa12.73□□□□□ -0.37
NUP43-205ENST00000463048 MEIG1Q5JSS6 88 aa12.73□□□□□ -0.37
NUP43-205ENST00000463048 MYMXA0A1B0GTQ4 84 aa12.72□□□□□ -0.37
NUP43-205ENST00000463048 E9PLD3 99 aa12.72□□□□□ -0.37
NUP43-205ENST00000463048 SFTA2Q6UW10 78 aa12.72□□□□□ -0.37
NUP43-205ENST00000463048 PHF5AQ7RTV0 110 aaKnown RBP12.72□□□□□ -0.37
NUP43-205ENST00000463048 SMIM13P0DJ93 91 aa12.71□□□□□ -0.37
NUP43-205ENST00000463048 SERTAD4-AS1Q5TG53 156 aa12.7□□□□□ -0.38
NUP43-205ENST00000463048 C7orf33Q8WU49 177 aa12.7□□□□□ -0.38
NUP43-205ENST00000463048 RPL37AP61513 92 aaKnown RBP12.69□□□□□ -0.38
NUP43-205ENST00000463048 HERV-K104P63124 156 aa12.69□□□□□ -0.38
NUP43-205ENST00000463048 KRTAP7-1Q8IUC3 87 aa12.69□□□□□ -0.38
NUP43-205ENST00000463048 IGKV2D-26A0A0A0MRZ7 120 aa12.68□□□□□ -0.38
NUP43-205ENST00000463048 SND1-IT1Q9HBX3 110 aa12.68□□□□□ -0.38
NUP43-205ENST00000463048 M0QXV9 152 aa12.67□□□□□ -0.38
NUP43-205ENST00000463048 SCGB1D1O95968 90 aa12.67□□□□□ -0.38
NUP43-205ENST00000463048 PLA2G1BP04054 148 aaKnown RBP12.67□□□□□ -0.38
NUP43-205ENST00000463048 COX17Q14061 63 aa12.67□□□□□ -0.38
NUP43-205ENST00000463048 ANKRD39Q53RE8 183 aa12.67□□□□□ -0.38
NUP43-205ENST00000463048 TTTY13Q9BZ97 58 aa12.67□□□□□ -0.38
NUP43-205ENST00000463048 NMUP48645 174 aa12.66□□□□□ -0.38
NUP43-205ENST00000463048 MIR7-3HGQ8N6C7 128 aa12.64□□□□□ -0.39
NUP43-205ENST00000463048 DAND5Q8N907 189 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms