RNA–Protein interactions for RNA: ENST00000462968.2

CD46-210, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 473 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-210ENST00000462968 STAG3L3P0CL85 134 aa1.37□□□□□ -2.19
CD46-210ENST00000462968 GCHFRP30047 84 aa1.37□□□□□ -2.19
CD46-210ENST00000462968 AP3S2P59780 193 aa1.37□□□□□ -2.19
CD46-210ENST00000462968 VBP1P61758 197 aa1.37□□□□□ -2.19
CD46-210ENST00000462968 UBE2G1P62253 170 aa1.37□□□□□ -2.19
CD46-210ENST00000462968 SMAGPQ0VAQ4 97 aa1.37□□□□□ -2.19
CD46-210ENST00000462968 NEDD8Q15843 81 aa1.37□□□□□ -2.19
CD46-210ENST00000462968 RNASE13Q5GAN3 156 aaKnown RBP1.37□□□□□ -2.19
CD46-210ENST00000462968 MZT2BQ6NZ67 158 aa1.37□□□□□ -2.19
CD46-210ENST00000462968 ATP11AUNQ6ZP68 121 aa1.37□□□□□ -2.19
CD46-210ENST00000462968 NKAPP1Q8N9T2 125 aa1.37□□□□□ -2.19
CD46-210ENST00000462968 GATD1Q8NB37 220 aa1.37□□□□□ -2.19
CD46-210ENST00000462968 FMC1Q96HJ9 113 aa1.37□□□□□ -2.19
CD46-210ENST00000462968 SPRR2FQ96RM1 72 aa1.37□□□□□ -2.19
CD46-210ENST00000462968 LIMD2Q9BT23 127 aa1.37□□□□□ -2.19
CD46-210ENST00000462968 TMEM167BQ9NRX6 74 aa1.37□□□□□ -2.19
CD46-210ENST00000462968 TMEM242Q9NWH2 141 aa1.37□□□□□ -2.19
CD46-210ENST00000462968 FAM25EA8MYX2 175 aa1.36□□□□□ -2.19
CD46-210ENST00000462968 TMEM238C9JI98 176 aa1.36□□□□□ -2.19
CD46-210ENST00000462968 F2Z2F3 143 aa1.36□□□□□ -2.19
CD46-210ENST00000462968 M0R378 163 aa1.36□□□□□ -2.19
CD46-210ENST00000462968 NDUFB6O95139 128 aa1.36□□□□□ -2.19
CD46-210ENST00000462968 IFNA1P01562 189 aa1.36□□□□□ -2.19
CD46-210ENST00000462968 TAGLN2P37802 199 aaKnown RBP1.36□□□□□ -2.19
CD46-210ENST00000462968 CDC34P49427 236 aaPredicted RBP1.36□□□□□ -2.19
CD46-210ENST00000462968 CKS1BP61024 79 aa1.36□□□□□ -2.19
CD46-210ENST00000462968 LINC00483Q53H64 154 aa1.36□□□□□ -2.19
CD46-210ENST00000462968 ADAMTSL4-AS1Q5T5F5 129 aa1.36□□□□□ -2.19
CD46-210ENST00000462968 TEX261Q6UWH6 196 aa1.36□□□□□ -2.19
CD46-210ENST00000462968 FAM19A3Q7Z5A8 133 aa1.36□□□□□ -2.19
CD46-210ENST00000462968 TOMM5Q8N4H5 51 aa1.36□□□□□ -2.19
CD46-210ENST00000462968 SCGB1C1Q8TD33 95 aa1.36□□□□□ -2.19
CD46-210ENST00000462968 DEDD2Q8WXF8 326 aa1.36□□□□□ -2.19
CD46-210ENST00000462968 RPL39LQ96EH5 51 aaKnown RBP1.36□□□□□ -2.19
CD46-210ENST00000462968 TPPP3Q9BW30 176 aa1.36□□□□□ -2.19
CD46-210ENST00000462968 NKX6-2Q9C056 277 aaPredicted RBP1.36□□□□□ -2.19
CD46-210ENST00000462968 RAB26Q9ULW5 256 aa1.36□□□□□ -2.19
CD46-210ENST00000462968 FXYD6-FXYD2A0A087WZ82 144 aa1.35□□□□□ -2.19
CD46-210ENST00000462968 TGIF2-C20orf24A0A0A6YYL0 155 aa1.35□□□□□ -2.19
CD46-210ENST00000462968 TRBV6-5A0A0K0K1A5 114 aa1.35□□□□□ -2.19
CD46-210ENST00000462968 FAM236DA0A1B0GTK5 79 aa1.35□□□□□ -2.19
CD46-210ENST00000462968 NOL3O60936 208 aaKnown RBP1.35□□□□□ -2.19
CD46-210ENST00000462968 CXorf1O96002 111 aa1.35□□□□□ -2.19
CD46-210ENST00000462968 IGLC6P0CF74 106 aa1.35□□□□□ -2.19
CD46-210ENST00000462968 FAM236CP0DP71 79 aa1.35□□□□□ -2.19
CD46-210ENST00000462968 RPL24P83731 157 aaKnown RBP1.35□□□□□ -2.19
CD46-210ENST00000462968 IL15RAQ13261 267 aa1.35□□□□□ -2.19
CD46-210ENST00000462968 C6orf226Q5I0X4 101 aa1.35□□□□□ -2.19
CD46-210ENST00000462968 Q6ZUT4 128 aa1.35□□□□□ -2.19
CD46-210ENST00000462968 TIMM17AQ99595 171 aa1.35□□□□□ -2.19
CD46-210ENST00000462968 ALKBH7Q9BT30 221 aaPredicted RBP1.35□□□□□ -2.19
CD46-210ENST00000462968 RNASE7Q9H1E1 156 aaKnown RBP1.35□□□□□ -2.19
CD46-210ENST00000462968 CHTOPQ9Y3Y2 248 aaKnown RBP1.35□□□□□ -2.19
CD46-210ENST00000462968 hCG_2014768A0A024R1R8 64 aa1.34□□□□□ -2.19
CD46-210ENST00000462968 TRBV27A0A0K0K1C4 114 aa1.34□□□□□ -2.19
CD46-210ENST00000462968 SCO1O75880 301 aa1.34□□□□□ -2.19
CD46-210ENST00000462968 FHITP49789 147 aa1.34□□□□□ -2.19
CD46-210ENST00000462968 KIAA1644Q3SXP7 199 aa1.34□□□□□ -2.19
CD46-210ENST00000462968 C10orf91Q5T1B1 145 aa1.34□□□□□ -2.19
CD46-210ENST00000462968 GAGE2AQ6NT46 116 aa1.34□□□□□ -2.19
CD46-210ENST00000462968 AKAP14Q86UN6 197 aa1.34□□□□□ -2.19
CD46-210ENST00000462968 LINC01561Q8N1V8 128 aa1.34□□□□□ -2.19
CD46-210ENST00000462968 SMCR5Q8TEV8 140 aa1.34□□□□□ -2.19
CD46-210ENST00000462968 TCEAL7Q9BRU2 100 aa1.34□□□□□ -2.19
CD46-210ENST00000462968 TIMM21Q9BVV7 248 aa1.34□□□□□ -2.19
CD46-210ENST00000462968 ST20Q9HBF5 79 aa1.34□□□□□ -2.19
CD46-210ENST00000462968 XKRY2A2RUG3 117 aa1.33□□□□□ -2.2
CD46-210ENST00000462968 FAM74A7A6NL05 159 aa1.33□□□□□ -2.2
CD46-210ENST00000462968 A8MWP4 228 aa1.33□□□□□ -2.2
CD46-210ENST00000462968 F8VRH5 84 aa1.33□□□□□ -2.2
CD46-210ENST00000462968 INMT-MINDY4F8WBC2 141 aa1.33□□□□□ -2.2
CD46-210ENST00000462968 VCYO14598 125 aa1.33□□□□□ -2.2
CD46-210ENST00000462968 MBP02144 154 aa1.33□□□□□ -2.2
CD46-210ENST00000462968 S100A9P06702 114 aaKnown RBP1.33□□□□□ -2.2
CD46-210ENST00000462968 FCER1GP30273 86 aa1.33□□□□□ -2.2
CD46-210ENST00000462968 AKR1C3P42330 323 aa1.33□□□□□ -2.2
CD46-210ENST00000462968 POLR2KP53803 58 aaKnown RBP1.33□□□□□ -2.2
CD46-210ENST00000462968 DEFA1P59665 94 aa1.33□□□□□ -2.2
CD46-210ENST00000462968 HBBP68871 147 aa1.33□□□□□ -2.2
CD46-210ENST00000462968 C9orf153Q5TBE3 101 aa1.33□□□□□ -2.2
CD46-210ENST00000462968 KRTAP5-10Q6L8G5 202 aa1.33□□□□□ -2.2
CD46-210ENST00000462968 Q75L30 129 aa1.33□□□□□ -2.2
CD46-210ENST00000462968 SMIM15Q7Z3B0 74 aa1.33□□□□□ -2.2
CD46-210ENST00000462968 BAGE2Q86Y30 109 aa1.33□□□□□ -2.2
CD46-210ENST00000462968 Q8IZM0 81 aa1.33□□□□□ -2.2
CD46-210ENST00000462968 C9orf62Q8N4C0 152 aa1.33□□□□□ -2.2
CD46-210ENST00000462968 FUNDC2Q9BWH2 189 aa1.33□□□□□ -2.2
CD46-210ENST00000462968 ACTR3CQ9C0K3 210 aaPredicted RBP1.33□□□□□ -2.2
CD46-210ENST00000462968 VCX3BQ9H321 246 aa1.33□□□□□ -2.2
CD46-210ENST00000462968 TOMM7Q9P0U1 55 aa1.33□□□□□ -2.2
CD46-210ENST00000462968 NAP1L6A6NFF2 107 aa1.32□□□□□ -2.2
CD46-210ENST00000462968 SIX6O95475 246 aa1.32□□□□□ -2.2
CD46-210ENST00000462968 MRPS36P82909 103 aaKnown RBP1.32□□□□□ -2.2
CD46-210ENST00000462968 CNPY1Q3B7I2 92 aa1.32□□□□□ -2.2
CD46-210ENST00000462968 Q6ZN92 141 aa1.32□□□□□ -2.2
CD46-210ENST00000462968 STOML3Q8TAV4 291 aa1.32□□□□□ -2.2
CD46-210ENST00000462968 FAM104AQ969W3 186 aa1.32□□□□□ -2.2
CD46-210ENST00000462968 CNFNQ9BYD5 112 aa1.32□□□□□ -2.2
CD46-210ENST00000462968 SMIM3Q9BZL3 60 aa1.32□□□□□ -2.2
CD46-210ENST00000462968 VCX3AQ9NNX9 186 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms