RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 SMCR5Q8TEV8 140 aa11.17□□□□□ -0.62
SMC4-204ENST00000462787 AVPP01185 164 aa11.17□□□□□ -0.62
SMC4-204ENST00000462787 C11orf72Q8NBR9 251 aa11.17□□□□□ -0.62
SMC4-204ENST00000462787 IGHV3OR16-9A0A0B4J2B5 98 aa11.16□□□□□ -0.62
SMC4-204ENST00000462787 Q8N9L7 120 aa11.16□□□□□ -0.62
SMC4-204ENST00000462787 CDSNQ15517 529 aa11.16□□□□□ -0.62
SMC4-204ENST00000462787 C11orf45Q8TAV5 145 aa11.16□□□□□ -0.62
SMC4-204ENST00000462787 PRO3102Q9H379 93 aa11.16□□□□□ -0.62
SMC4-204ENST00000462787 LINC00482Q8N8I6 264 aa11.15□□□□□ -0.62
SMC4-204ENST00000462787 OTOGLQ3ZCN5 2332 aa11.15□□□□□ -0.62
SMC4-204ENST00000462787 PTPRBP23467 1997 aa11.15□□□□□ -0.63
SMC4-204ENST00000462787 A0A096LNI7 61 aa11.14□□□□□ -0.63
SMC4-204ENST00000462787 A0A0J9YWU9 116 aa11.13□□□□□ -0.63
SMC4-204ENST00000462787 LINC01006Q8NI28 216 aa11.13□□□□□ -0.63
SMC4-204ENST00000462787 DEFB131BA0A096LNP1 70 aa11.13□□□□□ -0.63
SMC4-204ENST00000462787 KLK9Q2XQG4 91 aa11.13□□□□□ -0.63
SMC4-204ENST00000462787 SPATA3Q8NHX4 192 aa11.12□□□□□ -0.63
SMC4-204ENST00000462787 RPL37AP8A6NKH3 93 aa11.12□□□□□ -0.63
SMC4-204ENST00000462787 LOC110117498A0A087WWA1 95 aa11.11□□□□□ -0.63
SMC4-204ENST00000462787 KPRPQ5T749 579 aaPredicted RBP11.11□□□□□ -0.63
SMC4-204ENST00000462787 J3QKU1 62 aa11.1□□□□□ -0.63
SMC4-204ENST00000462787 NANOS2P60321 138 aaKnown RBP11.1□□□□□ -0.63
SMC4-204ENST00000462787 A8MTW9 85 aa11.1□□□□□ -0.63
SMC4-204ENST00000462787 Q6ZQT0 140 aa11.1□□□□□ -0.63
SMC4-204ENST00000462787 PTPN13Q12923 2485 aa11.09□□□□□ -0.63
SMC4-204ENST00000462787 hDV103S1A0JD37 113 aa11.09□□□□□ -0.63
SMC4-204ENST00000462787 CASC2Q6XLA1 102 aa11.09□□□□□ -0.63
SMC4-204ENST00000462787 WDR87Q6ZQQ6 2873 aa11.08□□□□□ -0.63
SMC4-204ENST00000462787 F8WDY8 70 aa11.08□□□□□ -0.64
SMC4-204ENST00000462787 RETNQ9HD89 108 aa11.08□□□□□ -0.64
SMC4-204ENST00000462787 IGLV1-51P01701 117 aa11.08□□□□□ -0.64
SMC4-204ENST00000462787 EP400Q96L91 3159 aa11.07□□□□□ -0.64
SMC4-204ENST00000462787 C6orf223Q8N319 242 aa11.07□□□□□ -0.64
SMC4-204ENST00000462787 C10orf25Q5T742 122 aa11.07□□□□□ -0.64
SMC4-204ENST00000462787 HCG22E2RYF7 251 aa11.06□□□□□ -0.64
SMC4-204ENST00000462787 LIMD2Q9BT23 127 aa11.06□□□□□ -0.64
SMC4-204ENST00000462787 A0A1W2PPR1 153 aa11.06□□□□□ -0.64
SMC4-204ENST00000462787 PLAC8L1A1L4L8 177 aa11.06□□□□□ -0.64
SMC4-204ENST00000462787 HIVEP2P31629 2446 aa11.05□□□□□ -0.64
SMC4-204ENST00000462787 C2orf48Q96LS8 159 aa11.04□□□□□ -0.64
SMC4-204ENST00000462787 MUC6Q6W4X9 2439 aa11.04□□□□□ -0.64
SMC4-204ENST00000462787 TRAV10A0A0B4J240 114 aa11.03□□□□□ -0.64
SMC4-204ENST00000462787 A0A1B0GW54 56 aa11.03□□□□□ -0.64
SMC4-204ENST00000462787 H0Y9P7 68 aa11.03□□□□□ -0.64
SMC4-204ENST00000462787 Q9UF83 564 aa11.02□□□□□ -0.64
SMC4-204ENST00000462787 SMIM29Q86T20 159 aa11.02□□□□□ -0.65
SMC4-204ENST00000462787 MYO9AB2RTY4 2548 aa11□□□□□ -0.65
SMC4-204ENST00000462787 TM2D3Q9BRN9 247 aa11□□□□□ -0.65
SMC4-204ENST00000462787 C4orf48Q5BLP8 95 aa10.99□□□□□ -0.65
SMC4-204ENST00000462787 ERC2-IT1O76042 136 aa10.99□□□□□ -0.65
SMC4-204ENST00000462787 REG3GQ6UW15 175 aa10.99□□□□□ -0.65
SMC4-204ENST00000462787 LINC01600Q96MT4 127 aa10.99□□□□□ -0.65
SMC4-204ENST00000462787 PIEZO2Q9H5I5 2752 aa10.99□□□□□ -0.65
SMC4-204ENST00000462787 ZNF706Q9Y5V0 76 aaPredicted RBP10.99□□□□□ -0.65
SMC4-204ENST00000462787 K7ERS5 55 aa10.98□□□□□ -0.65
SMC4-204ENST00000462787 CUL9Q8IWT3 2517 aa10.98□□□□□ -0.65
SMC4-204ENST00000462787 NAV2Q8IVL1 2488 aa10.98□□□□□ -0.65
SMC4-204ENST00000462787 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.98□□□□□ -0.65
SMC4-204ENST00000462787 CACNA1AO00555 2505 aa10.97□□□□□ -0.65
SMC4-204ENST00000462787 A0A087WSZ3 146 aa10.96□□□□□ -0.65
SMC4-204ENST00000462787 NOTCH2Q04721 2471 aa10.96□□□□□ -0.65
SMC4-204ENST00000462787 TLN1Q9Y490 2541 aaKnown RBP10.96□□□□□ -0.66
SMC4-204ENST00000462787 KLKP1Q107X0 134 aa10.96□□□□□ -0.66
SMC4-204ENST00000462787 ELOF1P60002 83 aaKnown RBP10.95□□□□□ -0.66
SMC4-204ENST00000462787 EIF4EBP3O60516 100 aaPredicted RBP10.94□□□□□ -0.66
SMC4-204ENST00000462787 LY6G6DO95868 133 aa10.94□□□□□ -0.66
SMC4-204ENST00000462787 KIAA0087Q14695 138 aa10.94□□□□□ -0.66
SMC4-204ENST00000462787 Q6ZRU5 148 aa10.93□□□□□ -0.66
SMC4-204ENST00000462787 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.92□□□□□ -0.66
SMC4-204ENST00000462787 PCOTHQ58A44 107 aa10.92□□□□□ -0.66
SMC4-204ENST00000462787 C1orf64Q8NEQ6 169 aa10.91□□□□□ -0.66
SMC4-204ENST00000462787 Q9BRP9 147 aa10.91□□□□□ -0.66
SMC4-204ENST00000462787 PLA2G2AP14555 144 aa10.9□□□□□ -0.66
SMC4-204ENST00000462787 H3BPC8 53 aa10.9□□□□□ -0.67
SMC4-204ENST00000462787 LYPD5Q6UWN5 251 aa10.9□□□□□ -0.67
SMC4-204ENST00000462787 SPINK6Q6UWN8 80 aa10.9□□□□□ -0.67
SMC4-204ENST00000462787 LINC00336Q6ZUF6 198 aa10.89□□□□□ -0.67
SMC4-204ENST00000462787 IGLV9-49A0A0B4J1Y8 123 aa10.88□□□□□ -0.67
SMC4-204ENST00000462787 IGHV4-30-4P0DP06 118 aa10.88□□□□□ -0.67
SMC4-204ENST00000462787 DEFB116Q30KQ4 102 aa10.88□□□□□ -0.67
SMC4-204ENST00000462787 LINC00474Q9P2X8 69 aa10.88□□□□□ -0.67
SMC4-204ENST00000462787 WIPF1O43516 503 aa10.87□□□□□ -0.67
SMC4-204ENST00000462787 C16orf95Q9H693 158 aa10.87□□□□□ -0.67
SMC4-204ENST00000462787 C6orf48Q9UBA6 75 aa10.87□□□□□ -0.67
SMC4-204ENST00000462787 H7BZZ5 65 aa10.87□□□□□ -0.67
SMC4-204ENST00000462787 SONP18583 2426 aaKnown RBP10.85□□□□□ -0.67
SMC4-204ENST00000462787 Q8NBF4 154 aa10.85□□□□□ -0.67
SMC4-204ENST00000462787 HIVEP3Q5T1R4 2406 aa10.85□□□□□ -0.67
SMC4-204ENST00000462787 C7orf33Q8WU49 177 aa10.84□□□□□ -0.67
SMC4-204ENST00000462787 COL27A1Q8IZC6 1860 aaPredicted RBP10.84□□□□□ -0.67
SMC4-204ENST00000462787 IGLV6-57P01721 117 aa10.83□□□□□ -0.68
SMC4-204ENST00000462787 IGHV6-1A0A0B4J1U7 121 aa10.82□□□□□ -0.68
SMC4-204ENST00000462787 PCSK5Q92824 1860 aa10.81□□□□□ -0.68
SMC4-204ENST00000462787 CENPFP49454 3210 aa10.8□□□□□ -0.68
SMC4-204ENST00000462787 GVQW2A0A096LPI5 108 aaPredicted RBP10.8□□□□□ -0.68
SMC4-204ENST00000462787 TP53AIP1Q9HCN2 124 aa10.8□□□□□ -0.68
SMC4-204ENST00000462787 C22orf24Q9Y442 160 aa10.8□□□□□ -0.68
SMC4-204ENST00000462787 IGF2RP11717 2491 aa10.79□□□□□ -0.68
SMC4-204ENST00000462787 CCDC168Q8NDH2 2452 aa10.79□□□□□ -0.68
SMC4-204ENST00000462787 INAFM1C9JVW0 142 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms