RNA–Protein interactions for RNA: ENST00000461539.5

C9orf78-203, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-203ENST00000461539 Q6ZRU5 148 aa6.37□□□□□ -1.39
C9orf78-203ENST00000461539 CARD19Q96LW7 228 aa6.37□□□□□ -1.39
C9orf78-203ENST00000461539 VAMP8Q9BV40 100 aa6.37□□□□□ -1.39
C9orf78-203ENST00000461539 NDUFA12Q9UI09 145 aa6.37□□□□□ -1.39
C9orf78-203ENST00000461539 IGLV5-52A0A0A0MRZ9 124 aa6.36□□□□□ -1.39
C9orf78-203ENST00000461539 C10orf25Q5T742 122 aa6.36□□□□□ -1.39
C9orf78-203ENST00000461539 CDPF1Q6NVV7 123 aa6.36□□□□□ -1.39
C9orf78-203ENST00000461539 PAM16Q9Y3D7 125 aa6.36□□□□□ -1.39
C9orf78-203ENST00000461539 MYMXA0A1B0GTQ4 84 aa6.35□□□□□ -1.39
C9orf78-203ENST00000461539 KRTAP10-2P60368 255 aa6.35□□□□□ -1.39
C9orf78-203ENST00000461539 CNBPP62633 177 aaKnown RBP6.35□□□□□ -1.39
C9orf78-203ENST00000461539 SPATA45Q537H7 98 aa6.35□□□□□ -1.39
C9orf78-203ENST00000461539 ZNF625Q96I27 306 aaPredicted RBP6.35□□□□□ -1.39
C9orf78-203ENST00000461539 TTTY13Q9BZ97 58 aa6.35□□□□□ -1.39
C9orf78-203ENST00000461539 PGPEP1Q9NXJ5 209 aa6.35□□□□□ -1.39
C9orf78-203ENST00000461539 C6orf48Q9UBA6 75 aa6.35□□□□□ -1.39
C9orf78-203ENST00000461539 TRBV30A0A0K0K1B3 111 aa6.34□□□□□ -1.39
C9orf78-203ENST00000461539 ZNF815PA8K554 130 aa6.34□□□□□ -1.39
C9orf78-203ENST00000461539 S100A12P80511 92 aa6.34□□□□□ -1.39
C9orf78-203ENST00000461539 SFTA2Q6UW10 78 aa6.34□□□□□ -1.39
C9orf78-203ENST00000461539 DNAH2Q9P225 4427 aa6.34□□□□□ -1.39
C9orf78-203ENST00000461539 SMIM6P0DI80 62 aa6.33□□□□□ -1.4
C9orf78-203ENST00000461539 HERV-K104P63124 156 aa6.33□□□□□ -1.4
C9orf78-203ENST00000461539 LINC01620Q4KN68 170 aa6.33□□□□□ -1.4
C9orf78-203ENST00000461539 C9orf116Q5BN46 136 aaPredicted RBP6.33□□□□□ -1.4
C9orf78-203ENST00000461539 MEIG1Q5JSS6 88 aa6.33□□□□□ -1.4
C9orf78-203ENST00000461539 PCP2Q8IVA1 136 aa6.33□□□□□ -1.4
C9orf78-203ENST00000461539 DNAH17Q9UFH2 4485 aa6.32□□□□□ -1.4
C9orf78-203ENST00000461539 A0A1B0GVY2 172 aa6.32□□□□□ -1.4
C9orf78-203ENST00000461539 RNF151Q2KHN1 245 aa6.32□□□□□ -1.4
C9orf78-203ENST00000461539 C9orf163Q8N9P6 203 aa6.32□□□□□ -1.4
C9orf78-203ENST00000461539 ERG28Q9UKR5 140 aa6.32□□□□□ -1.4
C9orf78-203ENST00000461539 A0A0U1RRA0 63 aa6.31□□□□□ -1.4
C9orf78-203ENST00000461539 PFN2P35080 140 aa6.31□□□□□ -1.4
C9orf78-203ENST00000461539 SCGB1D4Q6XE38 83 aa6.31□□□□□ -1.4
C9orf78-203ENST00000461539 C14orf144Q96I85 54 aa6.31□□□□□ -1.4
C9orf78-203ENST00000461539 DNAH10Q8IVF4 4471 aa6.31□□□□□ -1.4
C9orf78-203ENST00000461539 RYR3Q15413 4870 aa6.3□□□□□ -1.4
C9orf78-203ENST00000461539 A0A0J9YXY3 114 aa6.3□□□□□ -1.4
C9orf78-203ENST00000461539 LOC107984640A0A0U1RRK4 108 aa6.3□□□□□ -1.4
C9orf78-203ENST00000461539 LINC00587B1AMM8 73 aa6.3□□□□□ -1.4
C9orf78-203ENST00000461539 COX8AP10176 69 aa6.3□□□□□ -1.4
C9orf78-203ENST00000461539 GCSHP23434 173 aa6.3□□□□□ -1.4
C9orf78-203ENST00000461539 LINC00158P58513 81 aa6.3□□□□□ -1.4
C9orf78-203ENST00000461539 RPL18AQ02543 176 aaKnown RBP6.3□□□□□ -1.4
C9orf78-203ENST00000461539 GAGE2BQ13066 116 aa6.3□□□□□ -1.4
C9orf78-203ENST00000461539 PKIGQ9Y2B9 76 aa6.3□□□□□ -1.4
C9orf78-203ENST00000461539 C16orf90A8MZG2 172 aa6.29□□□□□ -1.4
C9orf78-203ENST00000461539 NDUFC2-KCTD14E9PQ53 114 aa6.29□□□□□ -1.4
C9orf78-203ENST00000461539 SMIM13P0DJ93 91 aa6.29□□□□□ -1.4
C9orf78-203ENST00000461539 CIRBPQ14011 172 aaKnown RBP6.29□□□□□ -1.4
C9orf78-203ENST00000461539 GAGE2EQ4V326 116 aa6.29□□□□□ -1.4
C9orf78-203ENST00000461539 SDIM1Q6ZPB5 146 aa6.29□□□□□ -1.4
C9orf78-203ENST00000461539 C12orf57Q99622 126 aa6.29□□□□□ -1.4
C9orf78-203ENST00000461539 GAGE2DQ9UEU5 116 aa6.29□□□□□ -1.4
C9orf78-203ENST00000461539 IGKV2-24A0A0C4DH68 120 aa6.28□□□□□ -1.4
C9orf78-203ENST00000461539 TLX1NBP0CAT3 122 aa6.28□□□□□ -1.4
C9orf78-203ENST00000461539 COX17Q14061 63 aa6.28□□□□□ -1.4
C9orf78-203ENST00000461539 SLC25A34Q6PIV7 304 aa6.28□□□□□ -1.4
C9orf78-203ENST00000461539 Q6ZRP5 223 aa6.28□□□□□ -1.4
C9orf78-203ENST00000461539 BOD1L2Q8IYS8 172 aa6.28□□□□□ -1.4
C9orf78-203ENST00000461539 TP73-AS1Q9UF72 201 aa6.28□□□□□ -1.4
C9orf78-203ENST00000461539 DLEU1O43261 78 aa6.27□□□□□ -1.41
C9orf78-203ENST00000461539 MIR7-3HGQ8N6C7 128 aa6.27□□□□□ -1.41
C9orf78-203ENST00000461539 FAT2Q9NYQ8 4349 aa6.26□□□□□ -1.41
C9orf78-203ENST00000461539 A0A096LNI7 61 aa6.26□□□□□ -1.41
C9orf78-203ENST00000461539 TIMM17BO60830 172 aa6.26□□□□□ -1.41
C9orf78-203ENST00000461539 CHTF8P0CG12 524 aa6.26□□□□□ -1.41
C9orf78-203ENST00000461539 PTTG1IPP53801 180 aa6.26□□□□□ -1.41
C9orf78-203ENST00000461539 KRTAP10-1P60331 282 aa6.26□□□□□ -1.41
C9orf78-203ENST00000461539 LINC00518Q8N0U6 118 aa6.26□□□□□ -1.41
C9orf78-203ENST00000461539 DAND5Q8N907 189 aa6.26□□□□□ -1.41
C9orf78-203ENST00000461539 DPH3Q96FX2 82 aa6.26□□□□□ -1.41
C9orf78-203ENST00000461539 XAGE1AQ9HD64 81 aa6.26□□□□□ -1.41
C9orf78-203ENST00000461539 TMEM238C9JI98 176 aa6.25□□□□□ -1.41
C9orf78-203ENST00000461539 ADAMTSL4-AS1Q5T5F5 129 aa6.25□□□□□ -1.41
C9orf78-203ENST00000461539 LITAFQ99732 161 aa6.25□□□□□ -1.41
C9orf78-203ENST00000461539 PRO1933Q9H354 126 aa6.25□□□□□ -1.41
C9orf78-203ENST00000461539 SND1-IT1Q9HBX3 110 aa6.25□□□□□ -1.41
C9orf78-203ENST00000461539 LINC00474Q9P2X8 69 aa6.25□□□□□ -1.41
C9orf78-203ENST00000461539 UQCR10Q9UDW1 63 aa6.25□□□□□ -1.41
C9orf78-203ENST00000461539 NPC2P61916 151 aa6.24□□□□□ -1.41
C9orf78-203ENST00000461539 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.24□□□□□ -1.41
C9orf78-203ENST00000461539 PANO1I0J062 215 aa6.23□□□□□ -1.41
C9orf78-203ENST00000461539 SRSF9Q13242 221 aaKnown RBP eCLIP6.23□□□□□ -1.41
C9orf78-203ENST00000461539 C9orf129Q5T035 196 aaKnown RBP6.23□□□□□ -1.41
C9orf78-203ENST00000461539 MIEN1Q9BRT3 115 aa6.23□□□□□ -1.41
C9orf78-203ENST00000461539 DNAH11Q96DT5 4516 aa6.23□□□□□ -1.41
C9orf78-203ENST00000461539 FRAS1Q86XX4 4008 aa6.22□□□□□ -1.41
C9orf78-203ENST00000461539 SPACA4Q8TDM5 124 aa6.22□□□□□ -1.41
C9orf78-203ENST00000461539 SPANXDQ9BXN6 97 aa6.22□□□□□ -1.41
C9orf78-203ENST00000461539 SPANXCQ9NY87 97 aa6.22□□□□□ -1.41
C9orf78-203ENST00000461539 FAM30AQ9NZY2 134 aa6.22□□□□□ -1.41
C9orf78-203ENST00000461539 A0A1W2PNN7 141 aa6.21□□□□□ -1.42
C9orf78-203ENST00000461539 TSTD3H0UI37 97 aa6.21□□□□□ -1.42
C9orf78-203ENST00000461539 HNRNPA3P51991 378 aaKnown RBP6.21□□□□□ -1.42
C9orf78-203ENST00000461539 SOSTDC1Q6X4U4 206 aa6.21□□□□□ -1.42
C9orf78-203ENST00000461539 C2orf91Q6ZV80 131 aa6.21□□□□□ -1.42
C9orf78-203ENST00000461539 Q6ZVH6 145 aa6.21□□□□□ -1.42
C9orf78-203ENST00000461539 FAM19A5Q7Z5A7 132 aaPredicted RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 241.5 ms